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KJC3_011912-T1, KJC3_011912-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011912-T1
Unique NameKJC3_011912-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2005432..2006557+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011912-T1 ID=KJC3_011912-T1|Name=KJC3_011912-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1126bp|location=Sequence derived from alignment at ch8:2005432..2006557+ (Aspergillus niger KJC3)
ATGACTAGATCTGATCTATATCCTCTGGGAAGAGGACTATCGGATTCAGT
TCGGTAAGCTCTCAATGCGACCTGTTGACGTTACAATCTCTTGCTCATAC
ATGTCTCTAGGTTGGATGCTCAGCACCATCTATGGAAGCTCCATACTGGA
TACACACTTCACCCCAAGATTTCTATCACTACAGACATGAAAACAGCGGA
GGTTGGCACTGGAAATGCGTAATATAGATCATTAACTTTTCTTACTCGAG
GGTATGGATCGATACTGTTCGGGTTTCTATAATATTCGAGTTTCGTTCCA
TGCCGGACCCAGCATACGAATATACACTAACAAAGTACAGGATTTGGCTC
TTTGACCTAGCCCAGTCGATGCCACCTACCGTGCAACTGCATGGCTTCGA
TATCTCGGAGGAGCAATATCCTCCGAAGCATATGTGGCCAGGGAATGTCA
ATCTAGCGCTGTTGGACGCACTCAAGGATGTCCCTCCCGCACTTGTTGGC
CAATACGATGTTGTACATATCCGGATGTGGGCGAGTAATATACGGGATGG
CAACACCAGGCCGCTGATTTCACACTTGCAAGAGTTGCTGAGTGAGTACT
ATATTTTAACGACCAAGATCTATCTCAGAATCATCTAACAGATACAAGAA
CCAGGAGGCTACATCCAGTGGGAGGAGGCAGATCTCATTCACCAATATGT
GAAAGGGCGTAAGGCCCTTGCGTTTGCAGAACAGATACCATGTCTATTTA
AGAAGGTCGGTCTGGACTACAGGTAGGATCTCCTCTTTTTTTTCCCAACT
TCGTGTTTTTCGATGTGAAAACAAGAAAGGCTCATTGATACTATTGCAGC
TGGGTAACAAAACTCCCTCGCGATTTGAAAGAAGCACATCTGGATGTAAT
AGAATCCAAGACGGAGTCATTCCAGGAATCCCTTGTCCAGAAGTGTACAG
ACACATATCTCCTTGCTCTCGGTGAGATATTACGCGGCACTAAGTTGACA
TGCGCGGAAGATATTGTACCTCTGGTGACCAAGCATGAGGCAGAACTACA
GGAACTTTGCGCTGAACGCAAGGATACGGTATATAACTGGTCTCCTGTCA
AAATTTTGGCGCGTAAGGCTGCCTAA
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Coding sequence (CDS) from alignment at ch8:2005432..2006557+

>KJC3_011912-T1 ID=KJC3_011912-T1|Name=KJC3_011912-T1|organism=Aspergillus niger KJC3|type=CDS|length=4065bp|location=Sequence derived from alignment at ch8:2005432..2006557+ (Aspergillus niger KJC3)
ATGACTAGATCTGATCTATATCCTCTGGGAAGAGGACTATCGGATTCAGT
TCGGTTGGATGCTCAGCACCATCTATGGAAGCTCCATACTGGATACACAC
TTCACCCCAAGATTTCTATCACTACAGACATGAAAACAGCGGAGGTTGGC
ACTGGAAATGCGATTTGGCTCTTTGACCTAGCCCAGTCGATGCCACCTAC
CGTGCAACTGCATGGCTTCGATATCTCGGAGGAGCAATATCCTCCGAAGC
ATATGTGGCCAGGGAATGTCAATCTAGCGCTGTTGGACGCACTCAAGGAT
GTCCCTCCCGCACTTGTTGGCCAATACGATGTTGTACATATCCGGATGTG
GGCGAGTAATATACGGGATGGCAACACCAGGCCGCTGATTTCACACTTGC
AAGAGTTGCTGAAACCAGGAGGCTACATCCAGTGGGAGGAGGCAGATCTC
ATTCACCAATATGTGAAAGGGCGTAAGGCCCTTGCGTTTGCAGAACAGAT
ACCATGTCTATTTAAGAAGGTCGGTCTGGACTACAGCTGGGTAACAAAAC
TCCCTCGCGATTTGAAAGAAGCACATCTGGATGTAATAGAATCCAAGACG
GAGTCATTCCAGGAATCCCTTGTCCAGAAGTGTACAGACACATATCTCCT
TGCTCTCGGTGAGATATTACGCGGCACTAAGTTGACATGCGCGGAAGATA
TTGTACCTCTGGTGACCAAGCATGAGGCAGAACTACAGGAACTTTGCGCT
GAACGCAAGGATACGGTATATAACTGGTCTCCTGTCAAAATTTTGGCGCG
TAAGGCTGCCTAAATGACTAGATCTGATCTATATCCTCTGGGAAGAGGAC
TATCGGATTCAGTTCGGTTGGATGCTCAGCACCATCTATGGAAGCTCCAT
ACTGGATACACACTTCACCCCAAGATTTCTATCACTACAGACATGAAAAC
AGCGGAGGTTGGCACTGGAAATGCGATTTGGCTCTTTGACCTAGCCCAGT
CGATGCCACCTACCGTGCAACTGCATGGCTTCGATATCTCGGAGGAGCAA
TATCCTCCGAAGCATATGTGGCCAGGGAATGTCAATCTAGCGCTGTTGGA
CGCACTCAAGGATGTCCCTCCCGCACTTGTTGGCCAATACGATGTTGTAC
ATATCCGGATGTGGGCGAGTAATATACGGGATGGCAACACCAGGCCGCTG
ATTTCACACTTGCAAGAGTTGCTGAAACCAGGAGGCTACATCCAGTGGGA
GGAGGCAGATCTCATTCACCAATATGTGAAAGGGCGTAAGGCCCTTGCGT
TTGCAGAACAGATACCATGTCTATTTAAGAAGGTCGGTCTGGACTACAGC
TGGGTAACAAAACTCCCTCGCGATTTGAAAGAAGCACATCTGGATGTAAT
AGAATCCAAGACGGAGTCATTCCAGGAATCCCTTGTCCAGAAGTGTACAG
ACACATATCTCCTTGCTCTCGGTGAGATATTACGCGGCACTAAGTTGACA
TGCGCGGAAGATATTGTACCTCTGGTGACCAAGCATGAGGCAGAACTACA
GGAACTTTGCGCTGAACGCAAGGATACGGTATATAACTGGTCTCCTGTCA
AAATTTTGGCGCGTAAGGCTGCCTAAATGACTAGATCTGATCTATATCCT
CTGGGAAGAGGACTATCGGATTCAGTTCGGTTGGATGCTCAGCACCATCT
ATGGAAGCTCCATACTGGATACACACTTCACCCCAAGATTTCTATCACTA
CAGACATGAAAACAGCGGAGGTTGGCACTGGAAATGCGATTTGGCTCTTT
GACCTAGCCCAGTCGATGCCACCTACCGTGCAACTGCATGGCTTCGATAT
CTCGGAGGAGCAATATCCTCCGAAGCATATGTGGCCAGGGAATGTCAATC
TAGCGCTGTTGGACGCACTCAAGGATGTCCCTCCCGCACTTGTTGGCCAA
TACGATGTTGTACATATCCGGATGTGGGCGAGTAATATACGGGATGGCAA
CACCAGGCCGCTGATTTCACACTTGCAAGAGTTGCTGAAACCAGGAGGCT
ACATCCAGTGGGAGGAGGCAGATCTCATTCACCAATATGTGAAAGGGCGT
AAGGCCCTTGCGTTTGCAGAACAGATACCATGTCTATTTAAGAAGGTCGG
TCTGGACTACAGCTGGGTAACAAAACTCCCTCGCGATTTGAAAGAAGCAC
ATCTGGATGTAATAGAATCCAAGACGGAGTCATTCCAGGAATCCCTTGTC
CAGAAGTGTACAGACACATATCTCCTTGCTCTCGGTGAGATATTACGCGG
CACTAAGTTGACATGCGCGGAAGATATTGTACCTCTGGTGACCAAGCATG
AGGCAGAACTACAGGAACTTTGCGCTGAACGCAAGGATACGGTATATAAC
TGGTCTCCTGTCAAAATTTTGGCGCGTAAGGCTGCCTAAATGACTAGATC
TGATCTATATCCTCTGGGAAGAGGACTATCGGATTCAGTTCGGTTGGATG
CTCAGCACCATCTATGGAAGCTCCATACTGGATACACACTTCACCCCAAG
ATTTCTATCACTACAGACATGAAAACAGCGGAGGTTGGCACTGGAAATGC
GATTTGGCTCTTTGACCTAGCCCAGTCGATGCCACCTACCGTGCAACTGC
ATGGCTTCGATATCTCGGAGGAGCAATATCCTCCGAAGCATATGTGGCCA
GGGAATGTCAATCTAGCGCTGTTGGACGCACTCAAGGATGTCCCTCCCGC
ACTTGTTGGCCAATACGATGTTGTACATATCCGGATGTGGGCGAGTAATA
TACGGGATGGCAACACCAGGCCGCTGATTTCACACTTGCAAGAGTTGCTG
AAACCAGGAGGCTACATCCAGTGGGAGGAGGCAGATCTCATTCACCAATA
TGTGAAAGGGCGTAAGGCCCTTGCGTTTGCAGAACAGATACCATGTCTAT
TTAAGAAGGTCGGTCTGGACTACAGCTGGGTAACAAAACTCCCTCGCGAT
TTGAAAGAAGCACATCTGGATGTAATAGAATCCAAGACGGAGTCATTCCA
GGAATCCCTTGTCCAGAAGTGTACAGACACATATCTCCTTGCTCTCGGTG
AGATATTACGCGGCACTAAGTTGACATGCGCGGAAGATATTGTACCTCTG
GTGACCAAGCATGAGGCAGAACTACAGGAACTTTGCGCTGAACGCAAGGA
TACGGTATATAACTGGTCTCCTGTCAAAATTTTGGCGCGTAAGGCTGCCT
AAATGACTAGATCTGATCTATATCCTCTGGGAAGAGGACTATCGGATTCA
GTTCGGTTGGATGCTCAGCACCATCTATGGAAGCTCCATACTGGATACAC
ACTTCACCCCAAGATTTCTATCACTACAGACATGAAAACAGCGGAGGTTG
GCACTGGAAATGCGATTTGGCTCTTTGACCTAGCCCAGTCGATGCCACCT
ACCGTGCAACTGCATGGCTTCGATATCTCGGAGGAGCAATATCCTCCGAA
GCATATGTGGCCAGGGAATGTCAATCTAGCGCTGTTGGACGCACTCAAGG
ATGTCCCTCCCGCACTTGTTGGCCAATACGATGTTGTACATATCCGGATG
TGGGCGAGTAATATACGGGATGGCAACACCAGGCCGCTGATTTCACACTT
GCAAGAGTTGCTGAAACCAGGAGGCTACATCCAGTGGGAGGAGGCAGATC
TCATTCACCAATATGTGAAAGGGCGTAAGGCCCTTGCGTTTGCAGAACAG
ATACCATGTCTATTTAAGAAGGTCGGTCTGGACTACAGCTGGGTAACAAA
ACTCCCTCGCGATTTGAAAGAAGCACATCTGGATGTAATAGAATCCAAGA
CGGAGTCATTCCAGGAATCCCTTGTCCAGAAGTGTACAGACACATATCTC
CTTGCTCTCGGTGAGATATTACGCGGCACTAAGTTGACATGCGCGGAAGA
TATTGTACCTCTGGTGACCAAGCATGAGGCAGAACTACAGGAACTTTGCG
CTGAACGCAAGGATACGGTATATAACTGGTCTCCTGTCAAAATTTTGGCG
CGTAAGGCTGCCTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011912KJC3_011912Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011912-T1KJC3_011912-T1-proteinAspergillus niger KJC3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011912-T1.exon1KJC3_011912-T1.exon1Aspergillus niger KJC3exon
KJC3_011912-T1.exon2KJC3_011912-T1.exon2Aspergillus niger KJC3exon
KJC3_011912-T1.exon3KJC3_011912-T1.exon3Aspergillus niger KJC3exon
KJC3_011912-T1.exon4KJC3_011912-T1.exon4Aspergillus niger KJC3exon
KJC3_011912-T1.exon5KJC3_011912-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011912-T1.cdsKJC3_011912-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR041698
DBxrefPFAM:PF13649
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2005432..2006557 +
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