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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2007248..2008872- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011913-T1 ID=KJC3_011913-T1|Name=KJC3_011913-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1625bp|location=Sequence derived from alignment at ch8:2007248..2008872- (Aspergillus niger KJC3)
ATGAAATACGCCCCAGACTTTGAATCCCTACCAAATGAACCTAGTACCTA
GTTTTAGCAGTAGTTATATAATGGCCGCGCATCACCTGCGCCCGAAGGCG
CCGATCTTGATTACGCAGCAACCGCCAGTTCAAAATATCTGGCCCTCTGG
GAAGCCGTTCCTGGTGGCTTCCATCACCAGCACGTCGAGGATTGTTCTGC
TATCTTCTCGCCGCTTTATACACTCTCGCTCCAGTTGTCCACTCTGCCGT
CGCTGTCGAACCTGGAGCATCCGGTCAGTTATCTCAACTAGCAAATAACC
CTCCATTTCCCTGGGCATCGACCAACGAGGACTCTGGGACGTTGACACCG
GTCACGAACCCGATGCAATTGGGCGATGGAAAGGAGGAGCAAGACGCCCT
GCAAATGATGGCCTTTATGAACGACGCGAGCAAGACTGACTCAACCTCCA
CCTCAAAAGACACAATGCAAGATGACAGCACCCTGCGAGTGATGATCGTA
GGTGACTCCATGTCCCAAGGAAAAGAAGGGGATTACACGTGGCGGTATCG
AATCTGGGAGTGGTTCCGGGCGCAACACATCGCCGTCCAGCTGGTGGGCC
CTTACACGGGGACCGCGCCGTCCGAACCGCAGGCCCACGGGGAGCACCAA
ACCACGCTGGGCCAGCCCAAGACCAGCGGCGGGTACGCCCCGGACGTGTC
CCCAGACTTTGATCGCCACCATTTCGCCGTGTGGGGCCGCACGGCTGCCA
TCGACAAGGACTTGATCTTCGATGTCCTCAGCGCACATCAAGCAGACCTG
ATATTGTTGATGCTGGGGTTCAATGACATGGCTTGGTTCCAGAGTGATGC
ATCGGGCACCCTGGACAGTATCCGTACGCTGGTTATCAATGCCCGCGCCG
CCAACCCAAACCTCAAGTTCGCTATCGCCAATGTTCCCCAGCGCAGCTTA
ATCCCGGGTCGTGAGGATATTCCGTTCAATACTAATATCTATAATGCGCT
GCTACGGAATGCCATCCCAGCGTGGAGTACTGCAGATTCGCCTATTCATC
TGGTCGAGCTGCAGGAGAACTACGACTGTGGGCCAGATTCATGTCCCGCT
GGTTACGACGGACTGCATCCAAATGTTGTGGGCGAGTATCAGATTGCTCG
TGCTTTCAGTCTCACCCTGGTGAAGGACTACGGATTTGGGGGATCGCCGT
TAATCATTCCTGATAATATTCCGGAAAGACCTCCCTCATTGTCGTTCAAC
TTTTGAGGGAGATGTAGCAGTGTTCTCCCTGTGCGATACAGACCATTCTC
ATCGACCCACCTATGTATACTTGGACTCATGATTCAGTCTGCAAATTTTG
AAAGTCATTATCCTAATTGGTGATCTTGTATGCGATGAACAAAACAAGCA
CACGAAACGGGAACATTACCACGAACCGAAGCCCTTCGGAGTACTAGTAC
ATACATTTTTTCAGTGGAATTAAGCTTTTCGAGGATAGTTTCACGTGGGT
TGTGGATGGTTCCCCTTGCATGAGTATTTTATGCTGTCCTCCTCAACTGT
AGATTCCATGTGTGCAGACAAAATAGAGAGCAACGGGAAGGGAGTGCCAT
ATCATTTGCGGTAGATGAGGGTGTT back to topCoding sequence (CDS) from alignment at ch8:2007248..2008872- >KJC3_011913-T1 ID=KJC3_011913-T1|Name=KJC3_011913-T1|organism=Aspergillus niger KJC3|type=CDS|length=2376bp|location=Sequence derived from alignment at ch8:2007248..2008872- (Aspergillus niger KJC3)
CAACCGCCAGTTCAAAATATCTGGCCCTCTGGGAAGCCGTTCCTGGTGGC
TTCCATCACCAGCACGTCGAGGATTGTTCTGCTATCTTCTCGCCGCTTTA
TACACTCTCGCTCCAGTTGTCCACTCTGCCGTCGCTGTCGAACCTGGAGC
ATCCGGTCAGTTATCTCAACTAGCAAATAACCCTCCATTTCCCTGGGCAT
CGACCAACGAGGACTCTGGGACGTTGACACCGGTCACGAACCCGATGCAA
TTGGGCGATGGAAAGGAGGAGCAAGACGCCCTGCAAATGATGGCCTTTAT
GAACGACGCGAGCAAGACTGACTCAACCTCCACCTCAAAAGACACAATGC
AAGATGACAGCACCCTGCGAGTGATGATCGTAGGTGACTCCATGTCCCAA
GGAAAAGAAGGGGATTACACGTGGCGGTATCGAATCTGGGAGTGGTTCCG
GGCGCAACACATCGCCGTCCAGCTGGTGGGCCCTTACACGGGGACCGCGC
CGTCCGAACCGCAGGCCCACGGGGAGCACCAAACCACGCTGGGCCAGCCC
AAGACCAGCGGCGGGTACGCCCCGGACGTGTCCCCAGACTTTGATCGCCA
CCATTTCGCCGTGTGGGGCCGCACGGCTGCCATCGACAAGGACTTGATCT
TCGATGTCCTCAGCGCACATCAAGCAGACCTGATATTGTTGATGCTGGGG
TTCAATGACATGGCTTGGTTCCAGAGTGATGCATCGGGCACCCTGGACAG
TATCCGTACGCTGGTTATCAATGCCCGCGCCGCCAACCCAAACCTCAAGT
TCGCTATCGCCAATGTTCCCCAGCGCAGCTTAATCCCGGGTCGTGAGGAT
ATTCCGTTCAATACTAATATCTATAATGCGCTGCTACGGAATGCCATCCC
AGCGTGGAGTACTGCAGATTCGCCTATTCATCTGGTCGAGCTGCAGGAGA
ACTACGACTGTGGGCCAGATTCATGTCCCGCTGGTTACGACGGACTGCAT
CCAAATGTTGTGGGCGAGTATCAGATTGCTCGTGCTTTCAGTCTCACCCT
GGTGAAGGACTACGGATTTGGGGGATCGCCGTTAATCATTCCTGATAATA
TTCCGGAAAGACCTCCCTCATTGTCGTTCAACTTTTGAATGAAATACGCC
CCAGACTTTGAATCCCTACCAAATGAACCTAGTACCTACAACCGCCAGTT
CAAAATATCTGGCCCTCTGGGAAGCCGTTCCTGGTGGCTTCCATCACCAG
CACGTCGAGGATTGTTCTGCTATCTTCTCGCCGCTTTATACACTCTCGCT
CCAGTTGTCCACTCTGCCGTCGCTGTCGAACCTGGAGCATCCGGTCAGTT
ATCTCAACTAGCAAATAACCCTCCATTTCCCTGGGCATCGACCAACGAGG
ACTCTGGGACGTTGACACCGGTCACGAACCCGATGCAATTGGGCGATGGA
AAGGAGGAGCAAGACGCCCTGCAAATGATGGCCTTTATGAACGACGCGAG
CAAGACTGACTCAACCTCCACCTCAAAAGACACAATGCAAGATGACAGCA
CCCTGCGAGTGATGATCGTAGGTGACTCCATGTCCCAAGGAAAAGAAGGG
GATTACACGTGGCGGTATCGAATCTGGGAGTGGTTCCGGGCGCAACACAT
CGCCGTCCAGCTGGTGGGCCCTTACACGGGGACCGCGCCGTCCGAACCGC
AGGCCCACGGGGAGCACCAAACCACGCTGGGCCAGCCCAAGACCAGCGGC
GGGTACGCCCCGGACGTGTCCCCAGACTTTGATCGCCACCATTTCGCCGT
GTGGGGCCGCACGGCTGCCATCGACAAGGACTTGATCTTCGATGTCCTCA
GCGCACATCAAGCAGACCTGATATTGTTGATGCTGGGGTTCAATGACATG
GCTTGGTTCCAGAGTGATGCATCGGGCACCCTGGACAGTATCCGTACGCT
GGTTATCAATGCCCGCGCCGCCAACCCAAACCTCAAGTTCGCTATCGCCA
ATGTTCCCCAGCGCAGCTTAATCCCGGGTCGTGAGGATATTCCGTTCAAT
ACTAATATCTATAATGCGCTGCTACGGAATGCCATCCCAGCGTGGAGTAC
TGCAGATTCGCCTATTCATCTGGTCGAGCTGCAGGAGAACTACGACTGTG
GGCCAGATTCATGTCCCGCTGGTTACGACGGACTGCATCCAAATGTTGTG
GGCGAGTATCAGATTGCTCGTGCTTTCAGTCTCACCCTGGTGAAGGACTA
CGGATTTGGGGGATCGCCGTTAATCATTCCTGATAATATTCCGGAAAGAC
CTCCCTCATTGTCGTTCAACTTTTGAATGAAATACGCCCCAGACTTTGAA
TCCCTACCAAATGAACCTAGTACCTA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011913-T1.utr3p1 | KJC3_011913-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:CE3 |
| DBxref | InterPro:IPR013830 |
| DBxref | InterPro:IPR036514 |
| DBxref | PFAM:PF13472 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2007248..2008872 - |
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