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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2011864..2013507+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011916-T1 ID=KJC3_011916-T1|Name=KJC3_011916-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1644bp|location=Sequence derived from alignment at ch8:2011864..2013507+ (Aspergillus niger KJC3)
ATGGTTTACAGGGGAAAGCCCAGTCCAGGTTGTGCTTTATGCCGGAAACG
GCGCCTAAAAGTACGTCGATGCACCTTCACGCCTAGATGATAGGCTGTTG
ACCCTATAGTAGTGCGACCAGGAGAGACCTGCATGCTCCCAATGTCTGCG
GATAGGTCAAGAATGCCCCGGATACCAAGACCCCCAAGCCCTTCGCGTCT
ACGATCAGACGGCCGCTGTAACCACCAAGGCCTTGGCCCGGGCTGCCAGT
ACCCGCAAGGCGGCTCGATCCCCCACTGCAGAGAAGTCGAAGACACCGCC
GTTGATTGCAGGGCCCACCAACATTCAAGAGCAAGCCATGTCTCACATCT
TCAAGTATTATGTCGGCACTAGTCAGAACCCCGGCATCCTCTGCTACTTG
CCGGATTTGCTGCGCACGGGCCCCTCGGATGCACTTCAAGCCACCATGAA
AGCCATAGGGCTGGCATGCATGTCGAGGGTCTACCACCTGCCTGAACTGG
CGCGATCGGCTGCGGAGGAGTACAGCAAGGCCTTGCGGGCCACTAATACG
AGTCTTCAGGATGCAGTATCAGCTACTTCTGACTCCACTTTGGGGGCCGT
GGTCACGCTGAGTATGTACGAGGTAATGCGTCTGATTTAGATGTGTGATT
AAGGTTGGGTTGTTAATTCCTGGAAAAACAGATTATTTCGGGCCAATCAC
AGATGATGGCCGCTTGGCTAAATCACGCCCGAGGAGCGTTGAAGCTTCTT
GAGTTACGAGGAACGAAGCAATTCGAATCAGCGGCTGGGCGGCGCCTCTT
CAGCAGCACACGCCTACAGATTGTTAGCTATACCCCCAACTATATCATAG
GCGCCAATCTTGGAGTGCTAACATGTCATTATCAGGCTATGATCAACATA
TTCTTCAGGACGAGCTGTCATCGCTCGCCAACGATAGCTGCATTGTCAAA
ATATGCAAAATCCGTTGGTGATGCTGATGCTCAGACAGTCGAAGACTTTT
ACAACATTTTAGTCACATTCAACGACCACTCCATAAAAGTAAAGGAGACC
TATAACAACACTGGCTTCCGCGGAAATATCGCACCGTTAATCAAGGAAGC
TCTCGACCTTGACGCCGACTTAGTCTCATGGGCGACTTCCCTAAGCCCAA
CCTGGCAGTATTCAACGACCAGCACCCCACTGCCATTCTCACACGTCCGT
AGCCACGACACGGAATATCACGTATATCCGAGCATCGACAACGCAGTGTA
CTGGAACCACTATCGCCAAGCGCGGATCATTCTCCACGAGATGATCCAAG
CAATGTGTCTCCATCAAGCAACTCCTGATTCACCGCAAATCATGCACCAG
TCCATCTCTATCAATAAACAATTAGCAGAGGATATCTGCGCTAGCGTTCC
TTATTTCTTCACTTCAGGTGAAGCCGCCCTTGGGGCCGTCGCGCGATTGC
CATGGCCTTTGTACCTTGCCTCTGACTGTGCGGGTGTCTCGCCTCAGACG
AAGGACTGGATTATGCAGATACTCGATCTTATTGCAACATCTACAGGCGT
GCAGCAGGCGCGTATCTTGTCGCAATTTGTCAAAACGGGCAATCACAGCT
ATTTGTTGATTCCTGGGAAGCCGAAAAGAATCGTTGATATATAG back to topCoding sequence (CDS) from alignment at ch8:2011864..2013507+ >KJC3_011916-T1 ID=KJC3_011916-T1|Name=KJC3_011916-T1|organism=Aspergillus niger KJC3|type=CDS|length=5880bp|location=Sequence derived from alignment at ch8:2011864..2013507+ (Aspergillus niger KJC3)
ATGGTTTACAGGGGAAAGCCCAGTCCAGGTTGTGCTTTATGCCGGAAACG
GCGCCTAAAATGCGACCAGGAGAGACCTGCATGCTCCCAATGTCTGCGGA
TAGGTCAAGAATGCCCCGGATACCAAGACCCCCAAGCCCTTCGCGTCTAC
GATCAGACGGCCGCTGTAACCACCAAGGCCTTGGCCCGGGCTGCCAGTAC
CCGCAAGGCGGCTCGATCCCCCACTGCAGAGAAGTCGAAGACACCGCCGT
TGATTGCAGGGCCCACCAACATTCAAGAGCAAGCCATGTCTCACATCTTC
AAGTATTATGTCGGCACTAGTCAGAACCCCGGCATCCTCTGCTACTTGCC
GGATTTGCTGCGCACGGGCCCCTCGGATGCACTTCAAGCCACCATGAAAG
CCATAGGGCTGGCATGCATGTCGAGGGTCTACCACCTGCCTGAACTGGCG
CGATCGGCTGCGGAGGAGTACAGCAAGGCCTTGCGGGCCACTAATACGAG
TCTTCAGGATGCAGTATCAGCTACTTCTGACTCCACTTTGGGGGCCGTGG
TCACGCTGAGTATGTACGAGATTATTTCGGGCCAATCACAGATGATGGCC
GCTTGGCTAAATCACGCCCGAGGAGCGTTGAAGCTTCTTGAGTTACGAGG
AACGAAGCAATTCGAATCAGCGGCTGGGCGGCGCCTCTTCAGCAGCACAC
GCCTACAGATTGCTATGATCAACATATTCTTCAGGACGAGCTGTCATCGC
TCGCCAACGATAGCTGCATTGTCAAAATATGCAAAATCCGTTGGTGATGC
TGATGCTCAGACAGTCGAAGACTTTTACAACATTTTAGTCACATTCAACG
ACCACTCCATAAAAGTAAAGGAGACCTATAACAACACTGGCTTCCGCGGA
AATATCGCACCGTTAATCAAGGAAGCTCTCGACCTTGACGCCGACTTAGT
CTCATGGGCGACTTCCCTAAGCCCAACCTGGCAGTATTCAACGACCAGCA
CCCCACTGCCATTCTCACACGTCCGTAGCCACGACACGGAATATCACGTA
TATCCGAGCATCGACAACGCAGTGTACTGGAACCACTATCGCCAAGCGCG
GATCATTCTCCACGAGATGATCCAAGCAATGTGTCTCCATCAAGCAACTC
CTGATTCACCGCAAATCATGCACCAGTCCATCTCTATCAATAAACAATTA
GCAGAGGATATCTGCGCTAGCGTTCCTTATTTCTTCACTTCAGGTGAAGC
CGCCCTTGGGGCCGTCGCGCGATTGCCATGGCCTTTGTACCTTGCCTCTG
ACTGTGCGGGTGTCTCGCCTCAGACGAAGGACTGGATTATGCAGATACTC
GATCTTATTGCAACATCTACAGGCGTGCAGCAGGCGCGTATCTTGTCGCA
ATTTGTCAAAACGGGCAATCACAGCTATTTGTTGATTCCTGGGAAGCCGA
AAAGAATCGTTGATATATAGATGGTTTACAGGGGAAAGCCCAGTCCAGGT
TGTGCTTTATGCCGGAAACGGCGCCTAAAATGCGACCAGGAGAGACCTGC
ATGCTCCCAATGTCTGCGGATAGGTCAAGAATGCCCCGGATACCAAGACC
CCCAAGCCCTTCGCGTCTACGATCAGACGGCCGCTGTAACCACCAAGGCC
TTGGCCCGGGCTGCCAGTACCCGCAAGGCGGCTCGATCCCCCACTGCAGA
GAAGTCGAAGACACCGCCGTTGATTGCAGGGCCCACCAACATTCAAGAGC
AAGCCATGTCTCACATCTTCAAGTATTATGTCGGCACTAGTCAGAACCCC
GGCATCCTCTGCTACTTGCCGGATTTGCTGCGCACGGGCCCCTCGGATGC
ACTTCAAGCCACCATGAAAGCCATAGGGCTGGCATGCATGTCGAGGGTCT
ACCACCTGCCTGAACTGGCGCGATCGGCTGCGGAGGAGTACAGCAAGGCC
TTGCGGGCCACTAATACGAGTCTTCAGGATGCAGTATCAGCTACTTCTGA
CTCCACTTTGGGGGCCGTGGTCACGCTGAGTATGTACGAGATTATTTCGG
GCCAATCACAGATGATGGCCGCTTGGCTAAATCACGCCCGAGGAGCGTTG
AAGCTTCTTGAGTTACGAGGAACGAAGCAATTCGAATCAGCGGCTGGGCG
GCGCCTCTTCAGCAGCACACGCCTACAGATTGCTATGATCAACATATTCT
TCAGGACGAGCTGTCATCGCTCGCCAACGATAGCTGCATTGTCAAAATAT
GCAAAATCCGTTGGTGATGCTGATGCTCAGACAGTCGAAGACTTTTACAA
CATTTTAGTCACATTCAACGACCACTCCATAAAAGTAAAGGAGACCTATA
ACAACACTGGCTTCCGCGGAAATATCGCACCGTTAATCAAGGAAGCTCTC
GACCTTGACGCCGACTTAGTCTCATGGGCGACTTCCCTAAGCCCAACCTG
GCAGTATTCAACGACCAGCACCCCACTGCCATTCTCACACGTCCGTAGCC
ACGACACGGAATATCACGTATATCCGAGCATCGACAACGCAGTGTACTGG
AACCACTATCGCCAAGCGCGGATCATTCTCCACGAGATGATCCAAGCAAT
GTGTCTCCATCAAGCAACTCCTGATTCACCGCAAATCATGCACCAGTCCA
TCTCTATCAATAAACAATTAGCAGAGGATATCTGCGCTAGCGTTCCTTAT
TTCTTCACTTCAGGTGAAGCCGCCCTTGGGGCCGTCGCGCGATTGCCATG
GCCTTTGTACCTTGCCTCTGACTGTGCGGGTGTCTCGCCTCAGACGAAGG
ACTGGATTATGCAGATACTCGATCTTATTGCAACATCTACAGGCGTGCAG
CAGGCGCGTATCTTGTCGCAATTTGTCAAAACGGGCAATCACAGCTATTT
GTTGATTCCTGGGAAGCCGAAAAGAATCGTTGATATATAGATGGTTTACA
GGGGAAAGCCCAGTCCAGGTTGTGCTTTATGCCGGAAACGGCGCCTAAAA
TGCGACCAGGAGAGACCTGCATGCTCCCAATGTCTGCGGATAGGTCAAGA
ATGCCCCGGATACCAAGACCCCCAAGCCCTTCGCGTCTACGATCAGACGG
CCGCTGTAACCACCAAGGCCTTGGCCCGGGCTGCCAGTACCCGCAAGGCG
GCTCGATCCCCCACTGCAGAGAAGTCGAAGACACCGCCGTTGATTGCAGG
GCCCACCAACATTCAAGAGCAAGCCATGTCTCACATCTTCAAGTATTATG
TCGGCACTAGTCAGAACCCCGGCATCCTCTGCTACTTGCCGGATTTGCTG
CGCACGGGCCCCTCGGATGCACTTCAAGCCACCATGAAAGCCATAGGGCT
GGCATGCATGTCGAGGGTCTACCACCTGCCTGAACTGGCGCGATCGGCTG
CGGAGGAGTACAGCAAGGCCTTGCGGGCCACTAATACGAGTCTTCAGGAT
GCAGTATCAGCTACTTCTGACTCCACTTTGGGGGCCGTGGTCACGCTGAG
TATGTACGAGATTATTTCGGGCCAATCACAGATGATGGCCGCTTGGCTAA
ATCACGCCCGAGGAGCGTTGAAGCTTCTTGAGTTACGAGGAACGAAGCAA
TTCGAATCAGCGGCTGGGCGGCGCCTCTTCAGCAGCACACGCCTACAGAT
TGCTATGATCAACATATTCTTCAGGACGAGCTGTCATCGCTCGCCAACGA
TAGCTGCATTGTCAAAATATGCAAAATCCGTTGGTGATGCTGATGCTCAG
ACAGTCGAAGACTTTTACAACATTTTAGTCACATTCAACGACCACTCCAT
AAAAGTAAAGGAGACCTATAACAACACTGGCTTCCGCGGAAATATCGCAC
CGTTAATCAAGGAAGCTCTCGACCTTGACGCCGACTTAGTCTCATGGGCG
ACTTCCCTAAGCCCAACCTGGCAGTATTCAACGACCAGCACCCCACTGCC
ATTCTCACACGTCCGTAGCCACGACACGGAATATCACGTATATCCGAGCA
TCGACAACGCAGTGTACTGGAACCACTATCGCCAAGCGCGGATCATTCTC
CACGAGATGATCCAAGCAATGTGTCTCCATCAAGCAACTCCTGATTCACC
GCAAATCATGCACCAGTCCATCTCTATCAATAAACAATTAGCAGAGGATA
TCTGCGCTAGCGTTCCTTATTTCTTCACTTCAGGTGAAGCCGCCCTTGGG
GCCGTCGCGCGATTGCCATGGCCTTTGTACCTTGCCTCTGACTGTGCGGG
TGTCTCGCCTCAGACGAAGGACTGGATTATGCAGATACTCGATCTTATTG
CAACATCTACAGGCGTGCAGCAGGCGCGTATCTTGTCGCAATTTGTCAAA
ACGGGCAATCACAGCTATTTGTTGATTCCTGGGAAGCCGAAAAGAATCGT
TGATATATAGATGGTTTACAGGGGAAAGCCCAGTCCAGGTTGTGCTTTAT
GCCGGAAACGGCGCCTAAAATGCGACCAGGAGAGACCTGCATGCTCCCAA
TGTCTGCGGATAGGTCAAGAATGCCCCGGATACCAAGACCCCCAAGCCCT
TCGCGTCTACGATCAGACGGCCGCTGTAACCACCAAGGCCTTGGCCCGGG
CTGCCAGTACCCGCAAGGCGGCTCGATCCCCCACTGCAGAGAAGTCGAAG
ACACCGCCGTTGATTGCAGGGCCCACCAACATTCAAGAGCAAGCCATGTC
TCACATCTTCAAGTATTATGTCGGCACTAGTCAGAACCCCGGCATCCTCT
GCTACTTGCCGGATTTGCTGCGCACGGGCCCCTCGGATGCACTTCAAGCC
ACCATGAAAGCCATAGGGCTGGCATGCATGTCGAGGGTCTACCACCTGCC
TGAACTGGCGCGATCGGCTGCGGAGGAGTACAGCAAGGCCTTGCGGGCCA
CTAATACGAGTCTTCAGGATGCAGTATCAGCTACTTCTGACTCCACTTTG
GGGGCCGTGGTCACGCTGAGTATGTACGAGATTATTTCGGGCCAATCACA
GATGATGGCCGCTTGGCTAAATCACGCCCGAGGAGCGTTGAAGCTTCTTG
AGTTACGAGGAACGAAGCAATTCGAATCAGCGGCTGGGCGGCGCCTCTTC
AGCAGCACACGCCTACAGATTGCTATGATCAACATATTCTTCAGGACGAG
CTGTCATCGCTCGCCAACGATAGCTGCATTGTCAAAATATGCAAAATCCG
TTGGTGATGCTGATGCTCAGACAGTCGAAGACTTTTACAACATTTTAGTC
ACATTCAACGACCACTCCATAAAAGTAAAGGAGACCTATAACAACACTGG
CTTCCGCGGAAATATCGCACCGTTAATCAAGGAAGCTCTCGACCTTGACG
CCGACTTAGTCTCATGGGCGACTTCCCTAAGCCCAACCTGGCAGTATTCA
ACGACCAGCACCCCACTGCCATTCTCACACGTCCGTAGCCACGACACGGA
ATATCACGTATATCCGAGCATCGACAACGCAGTGTACTGGAACCACTATC
GCCAAGCGCGGATCATTCTCCACGAGATGATCCAAGCAATGTGTCTCCAT
CAAGCAACTCCTGATTCACCGCAAATCATGCACCAGTCCATCTCTATCAA
TAAACAATTAGCAGAGGATATCTGCGCTAGCGTTCCTTATTTCTTCACTT
CAGGTGAAGCCGCCCTTGGGGCCGTCGCGCGATTGCCATGGCCTTTGTAC
CTTGCCTCTGACTGTGCGGGTGTCTCGCCTCAGACGAAGGACTGGATTAT
GCAGATACTCGATCTTATTGCAACATCTACAGGCGTGCAGCAGGCGCGTA
TCTTGTCGCAATTTGTCAAAACGGGCAATCACAGCTATTTGTTGATTCCT
GGGAAGCCGAAAAGAATCGTTGATATATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2011864..2013507 + |
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