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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2021921..2022760+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011920-T1 ID=KJC3_011920-T1|Name=KJC3_011920-T1|organism=Aspergillus niger KJC3|type=mRNA|length=840bp|location=Sequence derived from alignment at ch8:2021921..2022760+ (Aspergillus niger KJC3)
ATGAACCCAGCACTTAACCCGGACACTCCTCCCCCGCCTCCTCCGAAACC
CAGCAGCCACGAAGCCAGCCGAAGGGGCACGCCATCGCATTCAGGAACAC
CACAACAGTACCAGGAAGGACAATATGCACAGGACCGCTTGAATATGCAG
GGACAGAGATACTCTTCTTCCCCGGGAATGTTCAACCCCGCTGCCTCGCT
GAATGCGCTGCCTAAGCCGCCGACGGTGGAGGAGGGCTGGCTGCCTGCTG
GTGTGAAGGAGAAATCGTACGTTTTATTCATATTCCTTGCTGATTATCTG
TTTAATTCGGTGTTGGGATACGGGCTAACTGGTACATGTTTATGTGGTCG
CAGGACTGTCGACCTTCAGACTATCCTTCAAGATCCTAATCTCATCTCCG
CACTCTCCAGTAACCATCCTTCGTATACGGCGCATCAGGAAAACCTACAG
ACGCTTCTTAAATATAATAAGGACCTTGTGAACCGTTTGCTGGAACTGCA
GACACATGTTGGGGAACTACGCTCTTCTACAGAAACCCTTCTTCTGACTC
ATCAGTCGCTCGAGGTGTCCTGGCGGAAAAAGCAGTCTGAGATGGATGCT
GCGCTGGCGCCGTGGTCGCCTAAGGCTTTGTATCAGCGGCTTGCTGCTTC
GATTGCTGAGCAGGAGGCGGTGTGTCAGGCAGTGGAGGAGAGCTTCCTGG
AGGAGGAACATCATGGACGGGCCACTGAAAAGGAGGTCGGCGATTGGATT
AGACGGGTCAGAGCGGAATCTGCCAAGTTGGCGGCTAGGAGAGAGGCCAA
AGCTAGGTGGGATGAGGGGAGGGTTGGAGGGTGGAGGTGA back to topCoding sequence (CDS) from alignment at ch8:2021921..2022760+ >KJC3_011920-T1 ID=KJC3_011920-T1|Name=KJC3_011920-T1|organism=Aspergillus niger KJC3|type=CDS|length=1506bp|location=Sequence derived from alignment at ch8:2021921..2022760+ (Aspergillus niger KJC3)
ATGAACCCAGCACTTAACCCGGACACTCCTCCCCCGCCTCCTCCGAAACC
CAGCAGCCACGAAGCCAGCCGAAGGGGCACGCCATCGCATTCAGGAACAC
CACAACAGTACCAGGAAGGACAATATGCACAGGACCGCTTGAATATGCAG
GGACAGAGATACTCTTCTTCCCCGGGAATGTTCAACCCCGCTGCCTCGCT
GAATGCGCTGCCTAAGCCGCCGACGGTGGAGGAGGGCTGGCTGCCTGCTG
GTGTGAAGGAGAAATCGACTGTCGACCTTCAGACTATCCTTCAAGATCCT
AATCTCATCTCCGCACTCTCCAGTAACCATCCTTCGTATACGGCGCATCA
GGAAAACCTACAGACGCTTCTTAAATATAATAAGGACCTTGTGAACCGTT
TGCTGGAACTGCAGACACATGTTGGGGAACTACGCTCTTCTACAGAAACC
CTTCTTCTGACTCATCAGTCGCTCGAGGTGTCCTGGCGGAAAAAGCAGTC
TGAGATGGATGCTGCGCTGGCGCCGTGGTCGCCTAAGGCTTTGTATCAGC
GGCTTGCTGCTTCGATTGCTGAGCAGGAGGCGGTGTGTCAGGCAGTGGAG
GAGAGCTTCCTGGAGGAGGAACATCATGGACGGGCCACTGAAAAGGAGGT
CGGCGATTGGATTAGACGGGTCAGAGCGGAATCTGCCAAGTTGGCGGCTA
GGAGAGAGGCCAAAGCTAGGTGGGATGAGGGGAGGGTTGGAGGGTGGAGG
TGAATGAACCCAGCACTTAACCCGGACACTCCTCCCCCGCCTCCTCCGAA
ACCCAGCAGCCACGAAGCCAGCCGAAGGGGCACGCCATCGCATTCAGGAA
CACCACAACAGTACCAGGAAGGACAATATGCACAGGACCGCTTGAATATG
CAGGGACAGAGATACTCTTCTTCCCCGGGAATGTTCAACCCCGCTGCCTC
GCTGAATGCGCTGCCTAAGCCGCCGACGGTGGAGGAGGGCTGGCTGCCTG
CTGGTGTGAAGGAGAAATCGACTGTCGACCTTCAGACTATCCTTCAAGAT
CCTAATCTCATCTCCGCACTCTCCAGTAACCATCCTTCGTATACGGCGCA
TCAGGAAAACCTACAGACGCTTCTTAAATATAATAAGGACCTTGTGAACC
GTTTGCTGGAACTGCAGACACATGTTGGGGAACTACGCTCTTCTACAGAA
ACCCTTCTTCTGACTCATCAGTCGCTCGAGGTGTCCTGGCGGAAAAAGCA
GTCTGAGATGGATGCTGCGCTGGCGCCGTGGTCGCCTAAGGCTTTGTATC
AGCGGCTTGCTGCTTCGATTGCTGAGCAGGAGGCGGTGTGTCAGGCAGTG
GAGGAGAGCTTCCTGGAGGAGGAACATCATGGACGGGCCACTGAAAAGGA
GGTCGGCGATTGGATTAGACGGGTCAGAGCGGAATCTGCCAAGTTGGCGG
CTAGGAGAGAGGCCAAAGCTAGGTGGGATGAGGGGAGGGTTGGAGGGTGG
AGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR037202 |
| DBxref | InterPro:IPR009851 |
| DBxref | PFAM:PF07200 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2021921..2022760 + |
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