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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2043357..2044773+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011927-T1 ID=KJC3_011927-T1|Name=KJC3_011927-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1417bp|location=Sequence derived from alignment at ch8:2043357..2044773+ (Aspergillus niger KJC3)
ATGGATGTGGCCTCCCGACAGACAATGAGGCTTATTCGGCCCTCAAATAG
CCGATCCCTTCTCTCCAGCCCTCGCATTGCCGGCGCTGCTCTCCCAACTA
CATACCCTCTCAACCGCATTCGACGGAGAAATGCTTCCAACACCCCTCGG
AGACTTGCACCAGAGACATCATTTCTGCCCCTAGGCTCTGGGGCCTCGTC
CAGTGCACCACCTACGTACTTCTCCAATCGCACTTCCCTTCCTGTCAACA
CCGTTGTTCGCTTCGTCCCCCAACAGACAGCATGGATTGTCGAGCGGATG
GGCAAGTTCCATCGGATTCTAGAACCCGGTCTCGCCATTTTGATCCCATT
CCTGGACCGGATTGCCTATGTTAAGAGCTTGAAGGAGTCGGCTATCGAGA
TACCCAGTCAGAATGCCATCACGGCCGACAATGTAACCTTGGAGTTGGAT
GGCGTGTTATACACGAGGGTTTTTGACGCGTATAAAGCCAGGTGAGTGCG
ACACGGGACAGTTGTTGCGCAGAGAGTCCTGGAAGGGGGATCTTTTTTTC
TTTCGATTGTTGGACACAGACTGACCATGCGATTCTTCGGGCTTCAGTTA
CGGAGTGGAGGATGCCGAATATGCCATTTCTCAACTTGCGCAGACGACCA
TGCGTTCGGAAATCGGCCAACTTACCCTGGATCACGTTCTGAAGGAGCGC
GCCACGTTAAATACCAACATCACACAGGCCATCAACGAGGCCGCGCGCGA
TTGGGGTGTTGTGTGTCTGCGGTACGAAATTAGGGATATCCACGCCCCCG
AAGGTGTCGTTGCGGCCATGCACCGCCAGGTGACGGCAGAGCGGTCGAAG
CGCGCGGAGATTCTCGAGTCCGAAGGTCAGCGACAGAGCGCAATCAACAT
TGCTGAGGGTCGGAAGCAGTCCGTTATCCTGGCTTCCGAGGCTATGCGGA
CCGAACAGATCAACCGTGCTGCGGGTGAAGCCGAGGCCATCCTGCTGAAG
GCCAAGGCGACCGCCAGAGGCATTGACGCCGTTGCTCAGGCGATCGAGGC
TGGCAAGGACAATGCTCACGGCGCCGTCAGCCTGAGCGTCGCCGAGAAGT
ACGTTGAGGCCTTCTCCAACCTTGCCAAGGAGGGTACTGCCGTGGTCGTT
CCCGGTAACGTTGGCGACATGGGTGGCATGATTGCCAATGCCATGGCTGT
GTACGGCAAGATCAATGAGAGCCAGGCCAAGACCATCGCAGCGAAGTCTC
TGGGAGTCCAGGAGCCGGTTCAGACGGAGACCACTTCCAACAGCGCCAAG
TCGGAGCAGACACCGGAGTACGACAACGTCGATGCGGAGAAGGAACACAA
GACTCCTGATGCCGTTCAGGATGTTCTAGAAGGATTTGACCAGGTTAGCC
AACAGAGACACCAATGA back to topCoding sequence (CDS) from alignment at ch8:2043357..2044773+ >KJC3_011927-T1 ID=KJC3_011927-T1|Name=KJC3_011927-T1|organism=Aspergillus niger KJC3|type=CDS|length=2622bp|location=Sequence derived from alignment at ch8:2043357..2044773+ (Aspergillus niger KJC3)
ATGGATGTGGCCTCCCGACAGACAATGAGGCTTATTCGGCCCTCAAATAG
CCGATCCCTTCTCTCCAGCCCTCGCATTGCCGGCGCTGCTCTCCCAACTA
CATACCCTCTCAACCGCATTCGACGGAGAAATGCTTCCAACACCCCTCGG
AGACTTGCACCAGAGACATCATTTCTGCCCCTAGGCTCTGGGGCCTCGTC
CAGTGCACCACCTACGTACTTCTCCAATCGCACTTCCCTTCCTGTCAACA
CCGTTGTTCGCTTCGTCCCCCAACAGACAGCATGGATTGTCGAGCGGATG
GGCAAGTTCCATCGGATTCTAGAACCCGGTCTCGCCATTTTGATCCCATT
CCTGGACCGGATTGCCTATGTTAAGAGCTTGAAGGAGTCGGCTATCGAGA
TACCCAGTCAGAATGCCATCACGGCCGACAATGTAACCTTGGAGTTGGAT
GGCGTGTTATACACGAGGGTTTTTGACGCGTATAAAGCCAGTTACGGAGT
GGAGGATGCCGAATATGCCATTTCTCAACTTGCGCAGACGACCATGCGTT
CGGAAATCGGCCAACTTACCCTGGATCACGTTCTGAAGGAGCGCGCCACG
TTAAATACCAACATCACACAGGCCATCAACGAGGCCGCGCGCGATTGGGG
TGTTGTGTGTCTGCGGTACGAAATTAGGGATATCCACGCCCCCGAAGGTG
TCGTTGCGGCCATGCACCGCCAGGTGACGGCAGAGCGGTCGAAGCGCGCG
GAGATTCTCGAGTCCGAAGGTCAGCGACAGAGCGCAATCAACATTGCTGA
GGGTCGGAAGCAGTCCGTTATCCTGGCTTCCGAGGCTATGCGGACCGAAC
AGATCAACCGTGCTGCGGGTGAAGCCGAGGCCATCCTGCTGAAGGCCAAG
GCGACCGCCAGAGGCATTGACGCCGTTGCTCAGGCGATCGAGGCTGGCAA
GGACAATGCTCACGGCGCCGTCAGCCTGAGCGTCGCCGAGAAGTACGTTG
AGGCCTTCTCCAACCTTGCCAAGGAGGGTACTGCCGTGGTCGTTCCCGGT
AACGTTGGCGACATGGGTGGCATGATTGCCAATGCCATGGCTGTGTACGG
CAAGATCAATGAGAGCCAGGCCAAGACCATCGCAGCGAAGTCTCTGGGAG
TCCAGGAGCCGGTTCAGACGGAGACCACTTCCAACAGCGCCAAGTCGGAG
CAGACACCGGAGTACGACAACGTCGATGCGGAGAAGGAACACAAGACTCC
TGATGCCGTTCAGGATGTTCTAGAAGGATTTGACCAGGTTAGCCAACAGA
GACACCAATGAATGGATGTGGCCTCCCGACAGACAATGAGGCTTATTCGG
CCCTCAAATAGCCGATCCCTTCTCTCCAGCCCTCGCATTGCCGGCGCTGC
TCTCCCAACTACATACCCTCTCAACCGCATTCGACGGAGAAATGCTTCCA
ACACCCCTCGGAGACTTGCACCAGAGACATCATTTCTGCCCCTAGGCTCT
GGGGCCTCGTCCAGTGCACCACCTACGTACTTCTCCAATCGCACTTCCCT
TCCTGTCAACACCGTTGTTCGCTTCGTCCCCCAACAGACAGCATGGATTG
TCGAGCGGATGGGCAAGTTCCATCGGATTCTAGAACCCGGTCTCGCCATT
TTGATCCCATTCCTGGACCGGATTGCCTATGTTAAGAGCTTGAAGGAGTC
GGCTATCGAGATACCCAGTCAGAATGCCATCACGGCCGACAATGTAACCT
TGGAGTTGGATGGCGTGTTATACACGAGGGTTTTTGACGCGTATAAAGCC
AGTTACGGAGTGGAGGATGCCGAATATGCCATTTCTCAACTTGCGCAGAC
GACCATGCGTTCGGAAATCGGCCAACTTACCCTGGATCACGTTCTGAAGG
AGCGCGCCACGTTAAATACCAACATCACACAGGCCATCAACGAGGCCGCG
CGCGATTGGGGTGTTGTGTGTCTGCGGTACGAAATTAGGGATATCCACGC
CCCCGAAGGTGTCGTTGCGGCCATGCACCGCCAGGTGACGGCAGAGCGGT
CGAAGCGCGCGGAGATTCTCGAGTCCGAAGGTCAGCGACAGAGCGCAATC
AACATTGCTGAGGGTCGGAAGCAGTCCGTTATCCTGGCTTCCGAGGCTAT
GCGGACCGAACAGATCAACCGTGCTGCGGGTGAAGCCGAGGCCATCCTGC
TGAAGGCCAAGGCGACCGCCAGAGGCATTGACGCCGTTGCTCAGGCGATC
GAGGCTGGCAAGGACAATGCTCACGGCGCCGTCAGCCTGAGCGTCGCCGA
GAAGTACGTTGAGGCCTTCTCCAACCTTGCCAAGGAGGGTACTGCCGTGG
TCGTTCCCGGTAACGTTGGCGACATGGGTGGCATGATTGCCAATGCCATG
GCTGTGTACGGCAAGATCAATGAGAGCCAGGCCAAGACCATCGCAGCGAA
GTCTCTGGGAGTCCAGGAGCCGGTTCAGACGGAGACCACTTCCAACAGCG
CCAAGTCGGAGCAGACACCGGAGTACGACAACGTCGATGCGGAGAAGGAA
CACAAGACTCCTGATGCCGTTCAGGATGTTCTAGAAGGATTTGACCAGGT
TAGCCAACAGAGACACCAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036013 |
| DBxref | InterPro:IPR032435 |
| DBxref | InterPro:IPR001107 |
| DBxref | InterPro:IPR001972 |
| DBxref | PFAM:PF16200 |
| DBxref | PFAM:PF01145 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2043357..2044773 + |
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