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KJC3_011930-T1, KJC3_011930-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011930-T1
Unique NameKJC3_011930-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2052004..2052912+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011930-T1 ID=KJC3_011930-T1|Name=KJC3_011930-T1|organism=Aspergillus niger KJC3|type=mRNA|length=909bp|location=Sequence derived from alignment at ch8:2052004..2052912+ (Aspergillus niger KJC3)
CCACCGAACCACGTGACATCCCCCGCAACAGATCTGCGTGAAGATTGCGA
TAGCCTCCGAATTCAACAACATACATACATACACACCAACCAGCAAGATG
TTTAAGAAGGAGTGAGTGAAAACCAGCATAGTCATTACTACAGAACACCC
ATCAACTTCATCCATTTATTCCCCAATCCACCACCCTCCCTACAGCCCAA
TCCCTCCTCACAGCTAGCTACCAAGCAGAACAACCAACTAACAACTCAAA
CCACCATGATAACAGCATCCCCCCCAGCAACCGCTCAAAAGTCAAATCCT
CCGTGCAGCGCGGCCTCCGCCAACGGTTCCTAGACACATACCCCGGCTTC
GAACCCTACATTGAAGAAGTCCTACCGAAGAAGGCCCAACTGGATGCCGT
GAAGCTGTACGGTCCCCCAATACCTACCTTCCTTCATACCCTTTCCCCCC
TTCCCACAAACTAACTAACCCAACCCAACCCATAGTCCGGAAAGATCAAC
CCTCTACACCCACAACAACACCCCCCTCTTCTACCAACCCATGGACGGCC
CACCCATCCCGCACCTGAAACTGCTCCACGCATACCCTGACGCTCTCCCG
ACAATCCAAATCGACCGCGGCGCCATCCGCTTCGTGCTCTCGGGCGCGGC
GCTCATGGCGCCTGGGTTAACGAGTGCCGGGGGTAGATTGCCTGATGTCG
AGAATGGGGAGAAGGAGATCCCTGCGGGTGAGGTCGTGGCGGTGAAGGCG
GAGGGGAAGGAGTTTGTTTGTCTGGTCGGGGTGTTGAAGGTGGGTACGGA
GGAGATTAAGAAGGTCGGGAAGGGTGTGGTGCTTGATGAGGGGCATTATT
TGGGGGATGGGTTGTGGAGGTATCATCTTGATTGAATTGACCCCGGAGGG
GATCTGGGG
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Coding sequence (CDS) from alignment at ch8:2052004..2052912+

>KJC3_011930-T1 ID=KJC3_011930-T1|Name=KJC3_011930-T1|organism=Aspergillus niger KJC3|type=CDS|length=1665bp|location=Sequence derived from alignment at ch8:2052004..2052912+ (Aspergillus niger KJC3)
ATGTTTAAGAAGGACATCCCCCCCAGCAACCGCTCAAAAGTCAAATCCTC
CGTGCAGCGCGGCCTCCGCCAACGGTTCCTAGACACATACCCCGGCTTCG
AACCCTACATTGAAGAAGTCCTACCGAAGAAGGCCCAACTGGATGCCGTG
AAGCTTCCGGAAAGATCAACCCTCTACACCCACAACAACACCCCCCTCTT
CTACCAACCCATGGACGGCCCACCCATCCCGCACCTGAAACTGCTCCACG
CATACCCTGACGCTCTCCCGACAATCCAAATCGACCGCGGCGCCATCCGC
TTCGTGCTCTCGGGCGCGGCGCTCATGGCGCCTGGGTTAACGAGTGCCGG
GGGTAGATTGCCTGATGTCGAGAATGGGGAGAAGGAGATCCCTGCGGGTG
AGGTCGTGGCGGTGAAGGCGGAGGGGAAGGAGTTTGTTTGTCTGGTCGGG
GTGTTGAAGGTGGGTACGGAGGAGATTAAGAAGGTCGGGAAGGGTGTGGT
GCTTGATGAGGGGCATTATTTGGGGGATGGGTTGTGGAGGTATCATCTTG
ATTGAATGTTTAAGAAGGACATCCCCCCCAGCAACCGCTCAAAAGTCAAA
TCCTCCGTGCAGCGCGGCCTCCGCCAACGGTTCCTAGACACATACCCCGG
CTTCGAACCCTACATTGAAGAAGTCCTACCGAAGAAGGCCCAACTGGATG
CCGTGAAGCTTCCGGAAAGATCAACCCTCTACACCCACAACAACACCCCC
CTCTTCTACCAACCCATGGACGGCCCACCCATCCCGCACCTGAAACTGCT
CCACGCATACCCTGACGCTCTCCCGACAATCCAAATCGACCGCGGCGCCA
TCCGCTTCGTGCTCTCGGGCGCGGCGCTCATGGCGCCTGGGTTAACGAGT
GCCGGGGGTAGATTGCCTGATGTCGAGAATGGGGAGAAGGAGATCCCTGC
GGGTGAGGTCGTGGCGGTGAAGGCGGAGGGGAAGGAGTTTGTTTGTCTGG
TCGGGGTGTTGAAGGTGGGTACGGAGGAGATTAAGAAGGTCGGGAAGGGT
GTGGTGCTTGATGAGGGGCATTATTTGGGGGATGGGTTGTGGAGGTATCA
TCTTGATTGAATGTTTAAGAAGGACATCCCCCCCAGCAACCGCTCAAAAG
TCAAATCCTCCGTGCAGCGCGGCCTCCGCCAACGGTTCCTAGACACATAC
CCCGGCTTCGAACCCTACATTGAAGAAGTCCTACCGAAGAAGGCCCAACT
GGATGCCGTGAAGCTTCCGGAAAGATCAACCCTCTACACCCACAACAACA
CCCCCCTCTTCTACCAACCCATGGACGGCCCACCCATCCCGCACCTGAAA
CTGCTCCACGCATACCCTGACGCTCTCCCGACAATCCAAATCGACCGCGG
CGCCATCCGCTTCGTGCTCTCGGGCGCGGCGCTCATGGCGCCTGGGTTAA
CGAGTGCCGGGGGTAGATTGCCTGATGTCGAGAATGGGGAGAAGGAGATC
CCTGCGGGTGAGGTCGTGGCGGTGAAGGCGGAGGGGAAGGAGTTTGTTTG
TCTGGTCGGGGTGTTGAAGGTGGGTACGGAGGAGATTAAGAAGGTCGGGA
AGGGTGTGGTGCTTGATGAGGGGCATTATTTGGGGGATGGGTTGTGGAGG
TATCATCTTGATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011930KJC3_011930Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011930-T1KJC3_011930-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011930-T1.utr5p1KJC3_011930-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011930-T1.exon1KJC3_011930-T1.exon1Aspergillus niger KJC3exon
KJC3_011930-T1.exon2KJC3_011930-T1.exon2Aspergillus niger KJC3exon
KJC3_011930-T1.exon3KJC3_011930-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011930-T1.cdsKJC3_011930-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011930-T1.utr3p1KJC3_011930-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264RQY
DBxrefInterPro:IPR015947
DBxrefInterPro:IPR016437
DBxrefInterPro:IPR004521
DBxrefInterPro:IPR036974
DBxrefInterPro:IPR041366
DBxrefInterPro:IPR002478
DBxrefPFAM:PF01472
DBxrefPFAM:PF17832
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2052004..2052912 +
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