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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2052004..2052912+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011930-T1 ID=KJC3_011930-T1|Name=KJC3_011930-T1|organism=Aspergillus niger KJC3|type=mRNA|length=909bp|location=Sequence derived from alignment at ch8:2052004..2052912+ (Aspergillus niger KJC3) CCACCGAACCACGTGACATCCCCCGCAACAGATCTGCGTGAAGATTGCGA
TAGCCTCCGAATTCAACAACATACATACATACACACCAACCAGCAAGATG
TTTAAGAAGGAGTGAGTGAAAACCAGCATAGTCATTACTACAGAACACCC
ATCAACTTCATCCATTTATTCCCCAATCCACCACCCTCCCTACAGCCCAA
TCCCTCCTCACAGCTAGCTACCAAGCAGAACAACCAACTAACAACTCAAA
CCACCATGATAACAGCATCCCCCCCAGCAACCGCTCAAAAGTCAAATCCT
CCGTGCAGCGCGGCCTCCGCCAACGGTTCCTAGACACATACCCCGGCTTC
GAACCCTACATTGAAGAAGTCCTACCGAAGAAGGCCCAACTGGATGCCGT
GAAGCTGTACGGTCCCCCAATACCTACCTTCCTTCATACCCTTTCCCCCC
TTCCCACAAACTAACTAACCCAACCCAACCCATAGTCCGGAAAGATCAAC
CCTCTACACCCACAACAACACCCCCCTCTTCTACCAACCCATGGACGGCC
CACCCATCCCGCACCTGAAACTGCTCCACGCATACCCTGACGCTCTCCCG
ACAATCCAAATCGACCGCGGCGCCATCCGCTTCGTGCTCTCGGGCGCGGC
GCTCATGGCGCCTGGGTTAACGAGTGCCGGGGGTAGATTGCCTGATGTCG
AGAATGGGGAGAAGGAGATCCCTGCGGGTGAGGTCGTGGCGGTGAAGGCG
GAGGGGAAGGAGTTTGTTTGTCTGGTCGGGGTGTTGAAGGTGGGTACGGA
GGAGATTAAGAAGGTCGGGAAGGGTGTGGTGCTTGATGAGGGGCATTATT
TGGGGGATGGGTTGTGGAGGTATCATCTTGATTGAATTGACCCCGGAGGG
GATCTGGGG back to topCoding sequence (CDS) from alignment at ch8:2052004..2052912+ >KJC3_011930-T1 ID=KJC3_011930-T1|Name=KJC3_011930-T1|organism=Aspergillus niger KJC3|type=CDS|length=1665bp|location=Sequence derived from alignment at ch8:2052004..2052912+ (Aspergillus niger KJC3) ATGTTTAAGAAGGACATCCCCCCCAGCAACCGCTCAAAAGTCAAATCCTC CGTGCAGCGCGGCCTCCGCCAACGGTTCCTAGACACATACCCCGGCTTCG AACCCTACATTGAAGAAGTCCTACCGAAGAAGGCCCAACTGGATGCCGTG AAGCTTCCGGAAAGATCAACCCTCTACACCCACAACAACACCCCCCTCTT CTACCAACCCATGGACGGCCCACCCATCCCGCACCTGAAACTGCTCCACG CATACCCTGACGCTCTCCCGACAATCCAAATCGACCGCGGCGCCATCCGC TTCGTGCTCTCGGGCGCGGCGCTCATGGCGCCTGGGTTAACGAGTGCCGG GGGTAGATTGCCTGATGTCGAGAATGGGGAGAAGGAGATCCCTGCGGGTG AGGTCGTGGCGGTGAAGGCGGAGGGGAAGGAGTTTGTTTGTCTGGTCGGG GTGTTGAAGGTGGGTACGGAGGAGATTAAGAAGGTCGGGAAGGGTGTGGT GCTTGATGAGGGGCATTATTTGGGGGATGGGTTGTGGAGGTATCATCTTG ATTGAATGTTTAAGAAGGACATCCCCCCCAGCAACCGCTCAAAAGTCAAA TCCTCCGTGCAGCGCGGCCTCCGCCAACGGTTCCTAGACACATACCCCGG CTTCGAACCCTACATTGAAGAAGTCCTACCGAAGAAGGCCCAACTGGATG CCGTGAAGCTTCCGGAAAGATCAACCCTCTACACCCACAACAACACCCCC CTCTTCTACCAACCCATGGACGGCCCACCCATCCCGCACCTGAAACTGCT CCACGCATACCCTGACGCTCTCCCGACAATCCAAATCGACCGCGGCGCCA TCCGCTTCGTGCTCTCGGGCGCGGCGCTCATGGCGCCTGGGTTAACGAGT GCCGGGGGTAGATTGCCTGATGTCGAGAATGGGGAGAAGGAGATCCCTGC GGGTGAGGTCGTGGCGGTGAAGGCGGAGGGGAAGGAGTTTGTTTGTCTGG TCGGGGTGTTGAAGGTGGGTACGGAGGAGATTAAGAAGGTCGGGAAGGGT GTGGTGCTTGATGAGGGGCATTATTTGGGGGATGGGTTGTGGAGGTATCA TCTTGATTGAATGTTTAAGAAGGACATCCCCCCCAGCAACCGCTCAAAAG TCAAATCCTCCGTGCAGCGCGGCCTCCGCCAACGGTTCCTAGACACATAC CCCGGCTTCGAACCCTACATTGAAGAAGTCCTACCGAAGAAGGCCCAACT GGATGCCGTGAAGCTTCCGGAAAGATCAACCCTCTACACCCACAACAACA CCCCCCTCTTCTACCAACCCATGGACGGCCCACCCATCCCGCACCTGAAA CTGCTCCACGCATACCCTGACGCTCTCCCGACAATCCAAATCGACCGCGG CGCCATCCGCTTCGTGCTCTCGGGCGCGGCGCTCATGGCGCCTGGGTTAA CGAGTGCCGGGGGTAGATTGCCTGATGTCGAGAATGGGGAGAAGGAGATC CCTGCGGGTGAGGTCGTGGCGGTGAAGGCGGAGGGGAAGGAGTTTGTTTG TCTGGTCGGGGTGTTGAAGGTGGGTACGGAGGAGATTAAGAAGGTCGGGA AGGGTGTGGTGCTTGATGAGGGGCATTATTTGGGGGATGGGTTGTGGAGG TATCATCTTGATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_011930-T1.utr5p1 | KJC3_011930-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_011930-T1.utr3p1 | KJC3_011930-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
Note | BUSCO:EOG09264RQY |
DBxref | InterPro:IPR015947 |
DBxref | InterPro:IPR016437 |
DBxref | InterPro:IPR004521 |
DBxref | InterPro:IPR036974 |
DBxref | InterPro:IPR041366 |
DBxref | InterPro:IPR002478 |
DBxref | PFAM:PF01472 |
DBxref | PFAM:PF17832 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:2052004..2052912 + |
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