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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2080672..2082570+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011943-T1 ID=KJC3_011943-T1|Name=KJC3_011943-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1899bp|location=Sequence derived from alignment at ch8:2080672..2082570+ (Aspergillus niger KJC3)
CAATTAGTCCATTTATTCAGGCGTCTTGGCCTGTTACGGATGAAAATGTT
TAGCCGGATTTACTTTGTCACTCCTTGTTGGTTCCGGTAATGGATAAACG
CGTCTATGGAAATGGATTTCATATAAAATGGGCTGGTATTCAATACGACT
TCATTATCAGTCGTAAGAGCCAAAACACAAACTCACTTAGTTCGCTCAGT
ACCAGGCTATCTCATAGTCATGCACTCCACCAACATGCGAGCCATCTGGC
CCCTCGTTTCTCTTTTCTCTGCCGTCAAGGCCCTCCCCGCCGCAAGCGCA
ACTGCTTCAGCGTCCGTTGCTGCATCGAGCTCTCCGGCGCCAACGGCCTC
TGCTACGGGCAATCCCTTTGAGGGATACCAGCTCTATGCGAACCCCTACT
ATAAGTTACAAGTGGAGAGTTCGGCCATTCCATCATTGTCTGCTAGTTCA
CTGGTCGCGCAGGCGAGTGCTGCTGCAGATGTGCCTTCGTTCTACTGGCT
GTGAGTATCCATACAGAAGAACTTTACGTGCTTAGGCTGATGTTATGATA
CTCGATTTTCAGGGACACGGCCGACAAGGTACCTACAATGGGTGAATATC
TGGAAGACATCCAGACACAAAATGCTGCTGGAGCGAGCCCCCCAATTGCT
GGTATCTTCGTTGTCTATGACCTACCAGATCGGGATTGTTCTGCCTTGGC
TAGTAATGGGGAATACTCGATCAGTGATGGTGGTGTGGAGAAGTACAAGG
CGTACATTGATTCTATTCGGGAGCAGGTCGAGACGTACTCGGATGTTCAG
ACTATTCTGATTATTGGTATGCTTGCTTTGACTGATGGGTCAGACATTGA
GCTGGAATAGGATACTGACTGGTCCTTACAGAACCCGATAGCTTGGCTAA
CCTGGTGACGAATCTCGATGTGGCTAAATGCGCTAATGCTGAATCCGCTT
ACCTGGAATGCACCAACTATGCCCTTGAGCAACTGAATCTGCCGAACGTG
GCTATGTATCTTGATGCTGGTACGTCTTGTCCATTGAGGATACTGAGCAT
CGCTAATAATGCCCGCAGGCCATGCGGGATGGCTGGGATGGCCTGCCAAC
ATCGGTCCCGCGGCGCAACTCTACGCATCGGTGTATAAGAATGCGTCGTC
CCCAGCTGCTGTTCGCGGCCTCGCCACCAATGTAGCTAACTTCAATGCCT
GGAGCATCGACTCTTGCCCCTCTTATACATCGGGCAACGATGTCTGTGAT
GAGAAAAGCTACATCAATGCCATTGCGCCGGAGCTGTCTAGTGCTGGGTT
TGATGCCCACTTCATTACCGATACGGGTGAGTGATACTAAAAGTTATACA
TAGCGACATGTTCAATGTGACTCACGGCATTAGGTCGCAATGGGAAGCAA
CCCACCGGTCAGAGCGCGTGGGGTGACTGGTGCAATGTCAAGGATACCGG
CTTCGGTGCTCAACCGACGACCGATACTGGAGACGAGCTGGCTGATGCCT
TTGTCTGGGTCAAGCCGGGCGGAGAGAGCGACGGGACATCGGATACCAGC
TCTTCTCGCTACGACGCGCATTGCGGATATAGCGATGCCTTGCAGCCTGC
TCCGGAGGCCGGAACCTGGTTCCAGGTGGGTGTTGGCTGAAGACTTGTTG
AAGGTAGCATGCTAACACTATGTTCTAGGCATACTTTGAGCAACTTTTGA
CCAACGCCAATCCTTCCCTTTGAGCCGATCACTTAGTAGATGGATATACT
GAATGTTGGAAGTAGATCTTCAGGGTGGTATAGGGGAAGTGATGCAGTAG
ATCGTTGGAACAAGTGGGCAGGATCCCAATGAGAATGCAAATCTAAAGCT
GTTTCCTTAAATCTTTTCCATGAGTGCAGACATTTTATCTTAGTAGTTG back to topCoding sequence (CDS) from alignment at ch8:2080672..2082570+ >KJC3_011943-T1 ID=KJC3_011943-T1|Name=KJC3_011943-T1|organism=Aspergillus niger KJC3|type=CDS|length=7308bp|location=Sequence derived from alignment at ch8:2080672..2082570+ (Aspergillus niger KJC3)
ATGCACTCCACCAACATGCGAGCCATCTGGCCCCTCGTTTCTCTTTTCTC
TGCCGTCAAGGCCCTCCCCGCCGCAAGCGCAACTGCTTCAGCGTCCGTTG
CTGCATCGAGCTCTCCGGCGCCAACGGCCTCTGCTACGGGCAATCCCTTT
GAGGGATACCAGCTCTATGCGAACCCCTACTATAAGTTACAAGTGGAGAG
TTCGGCCATTCCATCATTGTCTGCTAGTTCACTGGTCGCGCAGGCGAGTG
CTGCTGCAGATGTGCCTTCGTTCTACTGGCTGGACACGGCCGACAAGGTA
CCTACAATGGGTGAATATCTGGAAGACATCCAGACACAAAATGCTGCTGG
AGCGAGCCCCCCAATTGCTGGTATCTTCGTTGTCTATGACCTACCAGATC
GGGATTGTTCTGCCTTGGCTAGTAATGGGGAATACTCGATCAGTGATGGT
GGTGTGGAGAAGTACAAGGCGTACATTGATTCTATTCGGGAGCAGGTCGA
GACGTACTCGGATGTTCAGACTATTCTGATTATTGAACCCGATAGCTTGG
CTAACCTGGTGACGAATCTCGATGTGGCTAAATGCGCTAATGCTGAATCC
GCTTACCTGGAATGCACCAACTATGCCCTTGAGCAACTGAATCTGCCGAA
CGTGGCTATGTATCTTGATGCTGGCCATGCGGGATGGCTGGGATGGCCTG
CCAACATCGGTCCCGCGGCGCAACTCTACGCATCGGTGTATAAGAATGCG
TCGTCCCCAGCTGCTGTTCGCGGCCTCGCCACCAATGTAGCTAACTTCAA
TGCCTGGAGCATCGACTCTTGCCCCTCTTATACATCGGGCAACGATGTCT
GTGATGAGAAAAGCTACATCAATGCCATTGCGCCGGAGCTGTCTAGTGCT
GGGTTTGATGCCCACTTCATTACCGATACGGGTCGCAATGGGAAGCAACC
CACCGGTCAGAGCGCGTGGGGTGACTGGTGCAATGTCAAGGATACCGGCT
TCGGTGCTCAACCGACGACCGATACTGGAGACGAGCTGGCTGATGCCTTT
GTCTGGGTCAAGCCGGGCGGAGAGAGCGACGGGACATCGGATACCAGCTC
TTCTCGCTACGACGCGCATTGCGGATATAGCGATGCCTTGCAGCCTGCTC
CGGAGGCCGGAACCTGGTTCCAGGCATACTTTGAGCAACTTTTGACCAAC
GCCAATCCTTCCCTTTGAATGCACTCCACCAACATGCGAGCCATCTGGCC
CCTCGTTTCTCTTTTCTCTGCCGTCAAGGCCCTCCCCGCCGCAAGCGCAA
CTGCTTCAGCGTCCGTTGCTGCATCGAGCTCTCCGGCGCCAACGGCCTCT
GCTACGGGCAATCCCTTTGAGGGATACCAGCTCTATGCGAACCCCTACTA
TAAGTTACAAGTGGAGAGTTCGGCCATTCCATCATTGTCTGCTAGTTCAC
TGGTCGCGCAGGCGAGTGCTGCTGCAGATGTGCCTTCGTTCTACTGGCTG
GACACGGCCGACAAGGTACCTACAATGGGTGAATATCTGGAAGACATCCA
GACACAAAATGCTGCTGGAGCGAGCCCCCCAATTGCTGGTATCTTCGTTG
TCTATGACCTACCAGATCGGGATTGTTCTGCCTTGGCTAGTAATGGGGAA
TACTCGATCAGTGATGGTGGTGTGGAGAAGTACAAGGCGTACATTGATTC
TATTCGGGAGCAGGTCGAGACGTACTCGGATGTTCAGACTATTCTGATTA
TTGAACCCGATAGCTTGGCTAACCTGGTGACGAATCTCGATGTGGCTAAA
TGCGCTAATGCTGAATCCGCTTACCTGGAATGCACCAACTATGCCCTTGA
GCAACTGAATCTGCCGAACGTGGCTATGTATCTTGATGCTGGCCATGCGG
GATGGCTGGGATGGCCTGCCAACATCGGTCCCGCGGCGCAACTCTACGCA
TCGGTGTATAAGAATGCGTCGTCCCCAGCTGCTGTTCGCGGCCTCGCCAC
CAATGTAGCTAACTTCAATGCCTGGAGCATCGACTCTTGCCCCTCTTATA
CATCGGGCAACGATGTCTGTGATGAGAAAAGCTACATCAATGCCATTGCG
CCGGAGCTGTCTAGTGCTGGGTTTGATGCCCACTTCATTACCGATACGGG
TCGCAATGGGAAGCAACCCACCGGTCAGAGCGCGTGGGGTGACTGGTGCA
ATGTCAAGGATACCGGCTTCGGTGCTCAACCGACGACCGATACTGGAGAC
GAGCTGGCTGATGCCTTTGTCTGGGTCAAGCCGGGCGGAGAGAGCGACGG
GACATCGGATACCAGCTCTTCTCGCTACGACGCGCATTGCGGATATAGCG
ATGCCTTGCAGCCTGCTCCGGAGGCCGGAACCTGGTTCCAGGCATACTTT
GAGCAACTTTTGACCAACGCCAATCCTTCCCTTTGAATGCACTCCACCAA
CATGCGAGCCATCTGGCCCCTCGTTTCTCTTTTCTCTGCCGTCAAGGCCC
TCCCCGCCGCAAGCGCAACTGCTTCAGCGTCCGTTGCTGCATCGAGCTCT
CCGGCGCCAACGGCCTCTGCTACGGGCAATCCCTTTGAGGGATACCAGCT
CTATGCGAACCCCTACTATAAGTTACAAGTGGAGAGTTCGGCCATTCCAT
CATTGTCTGCTAGTTCACTGGTCGCGCAGGCGAGTGCTGCTGCAGATGTG
CCTTCGTTCTACTGGCTGGACACGGCCGACAAGGTACCTACAATGGGTGA
ATATCTGGAAGACATCCAGACACAAAATGCTGCTGGAGCGAGCCCCCCAA
TTGCTGGTATCTTCGTTGTCTATGACCTACCAGATCGGGATTGTTCTGCC
TTGGCTAGTAATGGGGAATACTCGATCAGTGATGGTGGTGTGGAGAAGTA
CAAGGCGTACATTGATTCTATTCGGGAGCAGGTCGAGACGTACTCGGATG
TTCAGACTATTCTGATTATTGAACCCGATAGCTTGGCTAACCTGGTGACG
AATCTCGATGTGGCTAAATGCGCTAATGCTGAATCCGCTTACCTGGAATG
CACCAACTATGCCCTTGAGCAACTGAATCTGCCGAACGTGGCTATGTATC
TTGATGCTGGCCATGCGGGATGGCTGGGATGGCCTGCCAACATCGGTCCC
GCGGCGCAACTCTACGCATCGGTGTATAAGAATGCGTCGTCCCCAGCTGC
TGTTCGCGGCCTCGCCACCAATGTAGCTAACTTCAATGCCTGGAGCATCG
ACTCTTGCCCCTCTTATACATCGGGCAACGATGTCTGTGATGAGAAAAGC
TACATCAATGCCATTGCGCCGGAGCTGTCTAGTGCTGGGTTTGATGCCCA
CTTCATTACCGATACGGGTCGCAATGGGAAGCAACCCACCGGTCAGAGCG
CGTGGGGTGACTGGTGCAATGTCAAGGATACCGGCTTCGGTGCTCAACCG
ACGACCGATACTGGAGACGAGCTGGCTGATGCCTTTGTCTGGGTCAAGCC
GGGCGGAGAGAGCGACGGGACATCGGATACCAGCTCTTCTCGCTACGACG
CGCATTGCGGATATAGCGATGCCTTGCAGCCTGCTCCGGAGGCCGGAACC
TGGTTCCAGGCATACTTTGAGCAACTTTTGACCAACGCCAATCCTTCCCT
TTGAATGCACTCCACCAACATGCGAGCCATCTGGCCCCTCGTTTCTCTTT
TCTCTGCCGTCAAGGCCCTCCCCGCCGCAAGCGCAACTGCTTCAGCGTCC
GTTGCTGCATCGAGCTCTCCGGCGCCAACGGCCTCTGCTACGGGCAATCC
CTTTGAGGGATACCAGCTCTATGCGAACCCCTACTATAAGTTACAAGTGG
AGAGTTCGGCCATTCCATCATTGTCTGCTAGTTCACTGGTCGCGCAGGCG
AGTGCTGCTGCAGATGTGCCTTCGTTCTACTGGCTGGACACGGCCGACAA
GGTACCTACAATGGGTGAATATCTGGAAGACATCCAGACACAAAATGCTG
CTGGAGCGAGCCCCCCAATTGCTGGTATCTTCGTTGTCTATGACCTACCA
GATCGGGATTGTTCTGCCTTGGCTAGTAATGGGGAATACTCGATCAGTGA
TGGTGGTGTGGAGAAGTACAAGGCGTACATTGATTCTATTCGGGAGCAGG
TCGAGACGTACTCGGATGTTCAGACTATTCTGATTATTGAACCCGATAGC
TTGGCTAACCTGGTGACGAATCTCGATGTGGCTAAATGCGCTAATGCTGA
ATCCGCTTACCTGGAATGCACCAACTATGCCCTTGAGCAACTGAATCTGC
CGAACGTGGCTATGTATCTTGATGCTGGCCATGCGGGATGGCTGGGATGG
CCTGCCAACATCGGTCCCGCGGCGCAACTCTACGCATCGGTGTATAAGAA
TGCGTCGTCCCCAGCTGCTGTTCGCGGCCTCGCCACCAATGTAGCTAACT
TCAATGCCTGGAGCATCGACTCTTGCCCCTCTTATACATCGGGCAACGAT
GTCTGTGATGAGAAAAGCTACATCAATGCCATTGCGCCGGAGCTGTCTAG
TGCTGGGTTTGATGCCCACTTCATTACCGATACGGGTCGCAATGGGAAGC
AACCCACCGGTCAGAGCGCGTGGGGTGACTGGTGCAATGTCAAGGATACC
GGCTTCGGTGCTCAACCGACGACCGATACTGGAGACGAGCTGGCTGATGC
CTTTGTCTGGGTCAAGCCGGGCGGAGAGAGCGACGGGACATCGGATACCA
GCTCTTCTCGCTACGACGCGCATTGCGGATATAGCGATGCCTTGCAGCCT
GCTCCGGAGGCCGGAACCTGGTTCCAGGCATACTTTGAGCAACTTTTGAC
CAACGCCAATCCTTCCCTTTGAATGCACTCCACCAACATGCGAGCCATCT
GGCCCCTCGTTTCTCTTTTCTCTGCCGTCAAGGCCCTCCCCGCCGCAAGC
GCAACTGCTTCAGCGTCCGTTGCTGCATCGAGCTCTCCGGCGCCAACGGC
CTCTGCTACGGGCAATCCCTTTGAGGGATACCAGCTCTATGCGAACCCCT
ACTATAAGTTACAAGTGGAGAGTTCGGCCATTCCATCATTGTCTGCTAGT
TCACTGGTCGCGCAGGCGAGTGCTGCTGCAGATGTGCCTTCGTTCTACTG
GCTGGACACGGCCGACAAGGTACCTACAATGGGTGAATATCTGGAAGACA
TCCAGACACAAAATGCTGCTGGAGCGAGCCCCCCAATTGCTGGTATCTTC
GTTGTCTATGACCTACCAGATCGGGATTGTTCTGCCTTGGCTAGTAATGG
GGAATACTCGATCAGTGATGGTGGTGTGGAGAAGTACAAGGCGTACATTG
ATTCTATTCGGGAGCAGGTCGAGACGTACTCGGATGTTCAGACTATTCTG
ATTATTGAACCCGATAGCTTGGCTAACCTGGTGACGAATCTCGATGTGGC
TAAATGCGCTAATGCTGAATCCGCTTACCTGGAATGCACCAACTATGCCC
TTGAGCAACTGAATCTGCCGAACGTGGCTATGTATCTTGATGCTGGCCAT
GCGGGATGGCTGGGATGGCCTGCCAACATCGGTCCCGCGGCGCAACTCTA
CGCATCGGTGTATAAGAATGCGTCGTCCCCAGCTGCTGTTCGCGGCCTCG
CCACCAATGTAGCTAACTTCAATGCCTGGAGCATCGACTCTTGCCCCTCT
TATACATCGGGCAACGATGTCTGTGATGAGAAAAGCTACATCAATGCCAT
TGCGCCGGAGCTGTCTAGTGCTGGGTTTGATGCCCACTTCATTACCGATA
CGGGTCGCAATGGGAAGCAACCCACCGGTCAGAGCGCGTGGGGTGACTGG
TGCAATGTCAAGGATACCGGCTTCGGTGCTCAACCGACGACCGATACTGG
AGACGAGCTGGCTGATGCCTTTGTCTGGGTCAAGCCGGGCGGAGAGAGCG
ACGGGACATCGGATACCAGCTCTTCTCGCTACGACGCGCATTGCGGATAT
AGCGATGCCTTGCAGCCTGCTCCGGAGGCCGGAACCTGGTTCCAGGCATA
CTTTGAGCAACTTTTGACCAACGCCAATCCTTCCCTTTGAATGCACTCCA
CCAACATGCGAGCCATCTGGCCCCTCGTTTCTCTTTTCTCTGCCGTCAAG
GCCCTCCCCGCCGCAAGCGCAACTGCTTCAGCGTCCGTTGCTGCATCGAG
CTCTCCGGCGCCAACGGCCTCTGCTACGGGCAATCCCTTTGAGGGATACC
AGCTCTATGCGAACCCCTACTATAAGTTACAAGTGGAGAGTTCGGCCATT
CCATCATTGTCTGCTAGTTCACTGGTCGCGCAGGCGAGTGCTGCTGCAGA
TGTGCCTTCGTTCTACTGGCTGGACACGGCCGACAAGGTACCTACAATGG
GTGAATATCTGGAAGACATCCAGACACAAAATGCTGCTGGAGCGAGCCCC
CCAATTGCTGGTATCTTCGTTGTCTATGACCTACCAGATCGGGATTGTTC
TGCCTTGGCTAGTAATGGGGAATACTCGATCAGTGATGGTGGTGTGGAGA
AGTACAAGGCGTACATTGATTCTATTCGGGAGCAGGTCGAGACGTACTCG
GATGTTCAGACTATTCTGATTATTGAACCCGATAGCTTGGCTAACCTGGT
GACGAATCTCGATGTGGCTAAATGCGCTAATGCTGAATCCGCTTACCTGG
AATGCACCAACTATGCCCTTGAGCAACTGAATCTGCCGAACGTGGCTATG
TATCTTGATGCTGGCCATGCGGGATGGCTGGGATGGCCTGCCAACATCGG
TCCCGCGGCGCAACTCTACGCATCGGTGTATAAGAATGCGTCGTCCCCAG
CTGCTGTTCGCGGCCTCGCCACCAATGTAGCTAACTTCAATGCCTGGAGC
ATCGACTCTTGCCCCTCTTATACATCGGGCAACGATGTCTGTGATGAGAA
AAGCTACATCAATGCCATTGCGCCGGAGCTGTCTAGTGCTGGGTTTGATG
CCCACTTCATTACCGATACGGGTCGCAATGGGAAGCAACCCACCGGTCAG
AGCGCGTGGGGTGACTGGTGCAATGTCAAGGATACCGGCTTCGGTGCTCA
ACCGACGACCGATACTGGAGACGAGCTGGCTGATGCCTTTGTCTGGGTCA
AGCCGGGCGGAGAGAGCGACGGGACATCGGATACCAGCTCTTCTCGCTAC
GACGCGCATTGCGGATATAGCGATGCCTTGCAGCCTGCTCCGGAGGCCGG
AACCTGGTTCCAGGCATACTTTGAGCAACTTTTGACCAACGCCAATCCTT
CCCTTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
| GO:0030245 | cellulose catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011943-T1.utr5p1 | KJC3_011943-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011943-T1.utr3p1 | KJC3_011943-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-21) |
| Note | CAZy:GH6 |
| DBxref | InterPro:IPR001524 |
| DBxref | InterPro:IPR036434 |
| DBxref | InterPro:IPR016288 |
| DBxref | PFAM:PF01341 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2080672..2082570 + |
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