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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2080672..2082570+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011943-T2 ID=KJC3_011943-T2|Name=KJC3_011943-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1899bp|location=Sequence derived from alignment at ch8:2080672..2082570+ (Aspergillus niger KJC3)
CAATTAGTCCATTTATTCAGGCGTCTTGGCCTGTTACGGATGAAAATGTT
TAGCCGGATTTACTTTGTCACTCCTTGTTGGTTCCGGTAATGGATAAACG
CGTCTATGGAAATGGATTTCATATAAAATGGGCTGGTATTCAATACGACT
TCATTATCAGTCGTAAGAGCCAAAACACAAACTCACTTAGTTCGCTCAGT
ACCAGGCTATCTCATAGTCATGCACTCCACCAACATGCGAGCCATCTGGC
CCCTCGTTTCTCTTTTCTCTGCCGTCAAGGCCCTCCCCGCCGCAAGCGCA
ACTGCTTCAGCGTCCGTTGCTGCATCGAGCTCTCCGGCGCCAACGGCCTC
TGCTACGGGCAATCCCTTTGAGGGATACCAGCTCTATGCGAACCCCTACT
ATAAGTTACAAGTGGAGAGTTCGGCCATTCCATCATTGTCTGCTAGTTCA
CTGGTCGCGCAGGCGAGTGCTGCTGCAGATGTGCCTTCGTTCTACTGGCT
GTGAGTATCCATACAGAAGAACTTTACGTGCTTAGGCTGATGTTATGATA
CTCGATTTTCAGGGACACGGCCGACAAGGTACCTACAATGGGTGAATATC
TGGAAGACATCCAGACACAAAATGCTGCTGGAGCGAGCCCCCCAATTGCT
GGTATCTTCGTTGTCTATGACCTACCAGATCGGGATTGTTCTGCCTTGGC
TAGTAATGGGGAATACTCGATCAGTGATGGTGGTGTGGAGAAGTACAAGG
CGTACATTGATTCTATTCGGGAGCAGGTCGAGACGTACTCGGATGTTCAG
ACTATTCTGATTATTGGTATGCTTGCTTTGACTGATGGGTCAGACATTGA
GCTGGAATAGGATACTGACTGGTCCTTACAGAACCCGATAGCTTGGCTAA
CCTGGTGACGAATCTCGATGTGGCTAAATGCGCTAATGCTGAATCCGCTT
ACCTGGAATGCACCAACTATGCCCTTGAGCAACTGAATCTGCCGAACGTG
GCTATGTATCTTGATGCTGGTACGTCTTGTCCATTGAGGATACTGAGCAT
CGCTAATAATGCCCGCAGGCCATGCGGGATGGCTGGGATGGCCTGCCAAC
ATCGGTCCCGCGGCGCAACTCTACGCATCGGTGTATAAGAATGCGTCGTC
CCCAGCTGCTGTTCGCGGCCTCGCCACCAATGTAGCTAACTTCAATGCCT
GGAGCATCGACTCTTGCCCCTCTTATACATCGGGCAACGATGTCTGTGAT
GAGAAAAGCTACATCAATGCCATTGCGCCGGAGCTGTCTAGTGCTGGGTT
TGATGCCCACTTCATTACCGATACGGGTGAGTGATACTAAAAGTTATACA
TAGCGACATGTTCAATGTGACTCACGGCATTAGGTCGCAATGGGAAGCAA
CCCACCGGTCAGAGCGCGTGGGGTGACTGGTGCAATGTCAAGGATACCGG
CTTCGGTGCTCAACCGACGACCGATACTGGAGACGAGCTGGCTGATGCCT
TTGTCTGGGTCAAGCCGGGCGGAGAGAGCGACGGGACATCGGATACCAGC
TCTTCTCGCTACGACGCGCATTGCGGATATAGCGATGCCTTGCAGCCTGC
TCCGGAGGCCGGAACCTGGTTCCAGGTGGGTGTTGGCTGAAGACTTGTTG
AAGGTAGCATGCTAACACTATGTTCTAGGCATACTTTGAGCAACTTTTGA
CCAACGCCAATCCTTCCCTTTGAGCCGATCACTTAGTAGATGGATATACT
GAATGTTGGAAGTAGATCTTCAGGGTGGTATAGGGGAAGTGATGCAGTAG
ATCGTTGGAACAAGTGGGCAGGATCCCAATGAGAATGCAAATCTAAAGCT
GTTTCCTTAAATCTTTTCCATGAGTGCAGACATTTTATCTTAGTAGTTG back to topCoding sequence (CDS) from alignment at ch8:2080672..2082570+ >KJC3_011943-T2 ID=KJC3_011943-T2|Name=KJC3_011943-T2|organism=Aspergillus niger KJC3|type=CDS|length=5940bp|location=Sequence derived from alignment at ch8:2080672..2082570+ (Aspergillus niger KJC3)
ATGCACTCCACCAACATGCGAGCCATCTGGCCCCTCGTTTCTCTTTTCTC
TGCCGTCAAGGCCCTCCCCGCCGCAAGCGCAACTGCTTCAGCGTCCGTTG
CTGCATCGAGCTCTCCGGCGCCAACGGCCTCTGCTACGGGCAATCCCTTT
GAGGGATACCAGCTCTATGCGAACCCCTACTATAAGTTACAAGTGGAGAG
TTCGGCCATTCCATCATTGTCTGCTAGTTCACTGGTCGCGCAGGCGAGTG
CTGCTGCAGATGTGCCTTCGTTCTACTGGCTGGACACGGCCGACAAGGTA
CCTACAATGGGTGAATATCTGGAAGACATCCAGACACAAAATGCTGCTGG
AGCGAGCCCCCCAATTGCTGGTATCTTCGTTGTCTATGACCTACCAGATC
GGGATTGTTCTGCCTTGGCTAGTAATGGGGAATACTCGATCAGTGATGGT
GGTGTGGAGAAGTACAAGGCGTACATTGATTCTATTCGGGAGCAGGTCGA
GACGTACTCGGATGTTCAGACTATTCTGATTATTGAACCCGATAGCTTGG
CTAACCTGGTGACGAATCTCGATGTGGCTAAATGCGCTAATGCTGAATCC
GCTTACCTGGAATGCACCAACTATGCCCTTGAGCAACTGAATCTGCCGAA
CGTGGCTATGTATCTTGATGCTGGCCATGCGGGATGGCTGGGATGGCCTG
CCAACATCGGTCCCGCGGCGCAACTCTACGCATCGGTGTATAAGAATGCG
TCGTCCCCAGCTGCTGTTCGCGGCCTCGCCACCAATGTAGCTAACTTCAA
TGCCTGGAGCATCGACTCTTGCCCCTCTTATACATCGGGCAACGATGTCT
GTGATGAGAAAAGCTACATCAATGCCATTGCGCCGGAGCTGTCTAGTGCT
GGGTTTGATGCCCACTTCATTACCGATACGGGTCGCAATGGGAAGCAACC
CACCGGTCAGAGCGCGTGGGGTGACTGGTGCAATGTCAAGGATACCGGCT
TCGGTGCTCAACCGACGACCGATACTGGAGACGAGCTGGCTGATGCCTTT
GTCTGGGTCAAGCCGGGCGGAGAGAGCGACGGGACATCGGATACCAGCTC
TTCTCGCTACGACGCGCATTGCGGATATAGCGATGCCTTGCAGCCTGCTC
CGGAGGCCGGAACCTGGTTCCAGGTGGGTGTTGGCTGAATGCACTCCACC
AACATGCGAGCCATCTGGCCCCTCGTTTCTCTTTTCTCTGCCGTCAAGGC
CCTCCCCGCCGCAAGCGCAACTGCTTCAGCGTCCGTTGCTGCATCGAGCT
CTCCGGCGCCAACGGCCTCTGCTACGGGCAATCCCTTTGAGGGATACCAG
CTCTATGCGAACCCCTACTATAAGTTACAAGTGGAGAGTTCGGCCATTCC
ATCATTGTCTGCTAGTTCACTGGTCGCGCAGGCGAGTGCTGCTGCAGATG
TGCCTTCGTTCTACTGGCTGGACACGGCCGACAAGGTACCTACAATGGGT
GAATATCTGGAAGACATCCAGACACAAAATGCTGCTGGAGCGAGCCCCCC
AATTGCTGGTATCTTCGTTGTCTATGACCTACCAGATCGGGATTGTTCTG
CCTTGGCTAGTAATGGGGAATACTCGATCAGTGATGGTGGTGTGGAGAAG
TACAAGGCGTACATTGATTCTATTCGGGAGCAGGTCGAGACGTACTCGGA
TGTTCAGACTATTCTGATTATTGAACCCGATAGCTTGGCTAACCTGGTGA
CGAATCTCGATGTGGCTAAATGCGCTAATGCTGAATCCGCTTACCTGGAA
TGCACCAACTATGCCCTTGAGCAACTGAATCTGCCGAACGTGGCTATGTA
TCTTGATGCTGGCCATGCGGGATGGCTGGGATGGCCTGCCAACATCGGTC
CCGCGGCGCAACTCTACGCATCGGTGTATAAGAATGCGTCGTCCCCAGCT
GCTGTTCGCGGCCTCGCCACCAATGTAGCTAACTTCAATGCCTGGAGCAT
CGACTCTTGCCCCTCTTATACATCGGGCAACGATGTCTGTGATGAGAAAA
GCTACATCAATGCCATTGCGCCGGAGCTGTCTAGTGCTGGGTTTGATGCC
CACTTCATTACCGATACGGGTCGCAATGGGAAGCAACCCACCGGTCAGAG
CGCGTGGGGTGACTGGTGCAATGTCAAGGATACCGGCTTCGGTGCTCAAC
CGACGACCGATACTGGAGACGAGCTGGCTGATGCCTTTGTCTGGGTCAAG
CCGGGCGGAGAGAGCGACGGGACATCGGATACCAGCTCTTCTCGCTACGA
CGCGCATTGCGGATATAGCGATGCCTTGCAGCCTGCTCCGGAGGCCGGAA
CCTGGTTCCAGGTGGGTGTTGGCTGAATGCACTCCACCAACATGCGAGCC
ATCTGGCCCCTCGTTTCTCTTTTCTCTGCCGTCAAGGCCCTCCCCGCCGC
AAGCGCAACTGCTTCAGCGTCCGTTGCTGCATCGAGCTCTCCGGCGCCAA
CGGCCTCTGCTACGGGCAATCCCTTTGAGGGATACCAGCTCTATGCGAAC
CCCTACTATAAGTTACAAGTGGAGAGTTCGGCCATTCCATCATTGTCTGC
TAGTTCACTGGTCGCGCAGGCGAGTGCTGCTGCAGATGTGCCTTCGTTCT
ACTGGCTGGACACGGCCGACAAGGTACCTACAATGGGTGAATATCTGGAA
GACATCCAGACACAAAATGCTGCTGGAGCGAGCCCCCCAATTGCTGGTAT
CTTCGTTGTCTATGACCTACCAGATCGGGATTGTTCTGCCTTGGCTAGTA
ATGGGGAATACTCGATCAGTGATGGTGGTGTGGAGAAGTACAAGGCGTAC
ATTGATTCTATTCGGGAGCAGGTCGAGACGTACTCGGATGTTCAGACTAT
TCTGATTATTGAACCCGATAGCTTGGCTAACCTGGTGACGAATCTCGATG
TGGCTAAATGCGCTAATGCTGAATCCGCTTACCTGGAATGCACCAACTAT
GCCCTTGAGCAACTGAATCTGCCGAACGTGGCTATGTATCTTGATGCTGG
CCATGCGGGATGGCTGGGATGGCCTGCCAACATCGGTCCCGCGGCGCAAC
TCTACGCATCGGTGTATAAGAATGCGTCGTCCCCAGCTGCTGTTCGCGGC
CTCGCCACCAATGTAGCTAACTTCAATGCCTGGAGCATCGACTCTTGCCC
CTCTTATACATCGGGCAACGATGTCTGTGATGAGAAAAGCTACATCAATG
CCATTGCGCCGGAGCTGTCTAGTGCTGGGTTTGATGCCCACTTCATTACC
GATACGGGTCGCAATGGGAAGCAACCCACCGGTCAGAGCGCGTGGGGTGA
CTGGTGCAATGTCAAGGATACCGGCTTCGGTGCTCAACCGACGACCGATA
CTGGAGACGAGCTGGCTGATGCCTTTGTCTGGGTCAAGCCGGGCGGAGAG
AGCGACGGGACATCGGATACCAGCTCTTCTCGCTACGACGCGCATTGCGG
ATATAGCGATGCCTTGCAGCCTGCTCCGGAGGCCGGAACCTGGTTCCAGG
TGGGTGTTGGCTGAATGCACTCCACCAACATGCGAGCCATCTGGCCCCTC
GTTTCTCTTTTCTCTGCCGTCAAGGCCCTCCCCGCCGCAAGCGCAACTGC
TTCAGCGTCCGTTGCTGCATCGAGCTCTCCGGCGCCAACGGCCTCTGCTA
CGGGCAATCCCTTTGAGGGATACCAGCTCTATGCGAACCCCTACTATAAG
TTACAAGTGGAGAGTTCGGCCATTCCATCATTGTCTGCTAGTTCACTGGT
CGCGCAGGCGAGTGCTGCTGCAGATGTGCCTTCGTTCTACTGGCTGGACA
CGGCCGACAAGGTACCTACAATGGGTGAATATCTGGAAGACATCCAGACA
CAAAATGCTGCTGGAGCGAGCCCCCCAATTGCTGGTATCTTCGTTGTCTA
TGACCTACCAGATCGGGATTGTTCTGCCTTGGCTAGTAATGGGGAATACT
CGATCAGTGATGGTGGTGTGGAGAAGTACAAGGCGTACATTGATTCTATT
CGGGAGCAGGTCGAGACGTACTCGGATGTTCAGACTATTCTGATTATTGA
ACCCGATAGCTTGGCTAACCTGGTGACGAATCTCGATGTGGCTAAATGCG
CTAATGCTGAATCCGCTTACCTGGAATGCACCAACTATGCCCTTGAGCAA
CTGAATCTGCCGAACGTGGCTATGTATCTTGATGCTGGCCATGCGGGATG
GCTGGGATGGCCTGCCAACATCGGTCCCGCGGCGCAACTCTACGCATCGG
TGTATAAGAATGCGTCGTCCCCAGCTGCTGTTCGCGGCCTCGCCACCAAT
GTAGCTAACTTCAATGCCTGGAGCATCGACTCTTGCCCCTCTTATACATC
GGGCAACGATGTCTGTGATGAGAAAAGCTACATCAATGCCATTGCGCCGG
AGCTGTCTAGTGCTGGGTTTGATGCCCACTTCATTACCGATACGGGTCGC
AATGGGAAGCAACCCACCGGTCAGAGCGCGTGGGGTGACTGGTGCAATGT
CAAGGATACCGGCTTCGGTGCTCAACCGACGACCGATACTGGAGACGAGC
TGGCTGATGCCTTTGTCTGGGTCAAGCCGGGCGGAGAGAGCGACGGGACA
TCGGATACCAGCTCTTCTCGCTACGACGCGCATTGCGGATATAGCGATGC
CTTGCAGCCTGCTCCGGAGGCCGGAACCTGGTTCCAGGTGGGTGTTGGCT
GAATGCACTCCACCAACATGCGAGCCATCTGGCCCCTCGTTTCTCTTTTC
TCTGCCGTCAAGGCCCTCCCCGCCGCAAGCGCAACTGCTTCAGCGTCCGT
TGCTGCATCGAGCTCTCCGGCGCCAACGGCCTCTGCTACGGGCAATCCCT
TTGAGGGATACCAGCTCTATGCGAACCCCTACTATAAGTTACAAGTGGAG
AGTTCGGCCATTCCATCATTGTCTGCTAGTTCACTGGTCGCGCAGGCGAG
TGCTGCTGCAGATGTGCCTTCGTTCTACTGGCTGGACACGGCCGACAAGG
TACCTACAATGGGTGAATATCTGGAAGACATCCAGACACAAAATGCTGCT
GGAGCGAGCCCCCCAATTGCTGGTATCTTCGTTGTCTATGACCTACCAGA
TCGGGATTGTTCTGCCTTGGCTAGTAATGGGGAATACTCGATCAGTGATG
GTGGTGTGGAGAAGTACAAGGCGTACATTGATTCTATTCGGGAGCAGGTC
GAGACGTACTCGGATGTTCAGACTATTCTGATTATTGAACCCGATAGCTT
GGCTAACCTGGTGACGAATCTCGATGTGGCTAAATGCGCTAATGCTGAAT
CCGCTTACCTGGAATGCACCAACTATGCCCTTGAGCAACTGAATCTGCCG
AACGTGGCTATGTATCTTGATGCTGGCCATGCGGGATGGCTGGGATGGCC
TGCCAACATCGGTCCCGCGGCGCAACTCTACGCATCGGTGTATAAGAATG
CGTCGTCCCCAGCTGCTGTTCGCGGCCTCGCCACCAATGTAGCTAACTTC
AATGCCTGGAGCATCGACTCTTGCCCCTCTTATACATCGGGCAACGATGT
CTGTGATGAGAAAAGCTACATCAATGCCATTGCGCCGGAGCTGTCTAGTG
CTGGGTTTGATGCCCACTTCATTACCGATACGGGTCGCAATGGGAAGCAA
CCCACCGGTCAGAGCGCGTGGGGTGACTGGTGCAATGTCAAGGATACCGG
CTTCGGTGCTCAACCGACGACCGATACTGGAGACGAGCTGGCTGATGCCT
TTGTCTGGGTCAAGCCGGGCGGAGAGAGCGACGGGACATCGGATACCAGC
TCTTCTCGCTACGACGCGCATTGCGGATATAGCGATGCCTTGCAGCCTGC
TCCGGAGGCCGGAACCTGGTTCCAGGTGGGTGTTGGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
| GO:0030245 | cellulose catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011943-T2.utr5p1 | KJC3_011943-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011943-T2.utr3p1 | KJC3_011943-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-21) |
| Note | CAZy:GH6 |
| DBxref | InterPro:IPR001524 |
| DBxref | InterPro:IPR036434 |
| DBxref | InterPro:IPR016288 |
| DBxref | PFAM:PF01341 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2080672..2082570 + |
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