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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2121328..2122711- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011958-T1 ID=KJC3_011958-T1|Name=KJC3_011958-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1384bp|location=Sequence derived from alignment at ch8:2121328..2122711- (Aspergillus niger KJC3)
GTAATATCTACGACTACTAGTGTCTCTCTCTCTCTCTCTCTCTACAAGTA
TTCCCATATCAACATCATCATAATCTATAGTATACTGCAACATGCCGACC
ATCCTCCTCCTCGGCACCTGCGACACAAAATGGTCCGAACTCCTCTACCT
CCACTCCCAACTAACCTCTAACCCCTCCATCTCCGTCCTTCTCATGGACG
TCGGCCGCGCCGCCACCTCCTCCCCTCTCATCAACATTCCTCATCCCAGC
CTCAACAACAACAACAACAACAACAACAACAAAACAATCGACTACACCCA
ACTCTCCCAAAACGACTACATCCAAACCATCACCCACCAATCCACCCCCA
CCGTCACCGACCTCTACCACCATGGCAAAATCCACTCCATCCTCGCCATC
GGCGGCAGCTGCGGCACCACCATCGCAACCGCCATCATGCGCGATGCCCT
CCCCATCGGCTTCCCCAAACTCATGGTCTCCACCATGGCCTCCGGCGACG
TGGGGCCCTACATCCAGGAAACAGACATCACCATGATGTACAGTGTCGTC
GATGTAGCGGGTACAAACAGCATCTTGAATAGAATTCTCCGCAATGCAGC
GGCTGCAGGGACCGGCATGGCCATATCATACTGCGACTACCTTACCTCCG
AGACTACCATCGCTACAAACGGACATACCAAGATAAACTCGGAAGACGAA
AAGAAAACCAAAATCGGCATCACCATGTTCGGCGTAATCACCCCCGCGGT
CACCCAAATCCGCAGCTACCTCGAATCCCACCTCCCCAACCAATGTGAAA
TCTACGTTTTCCATGCCACCGGCTCGGGCGGAAAAGCCATGGAGCGCCTC
ATCCGCGAACAACAACTCGACGCCATCGTGGATCTGACCACCTCTGAGAT
CGTGGATGAGCTCGCCGGTGGGGTATTATCCGCCGGACCGGGCAGGTTAG
ATGCCGCTGCGGAGAGGGGCATCCCGCAGGTAGTGAGTGTGGGGGCATGC
GATATGATTAATTTCGGGACGAAGGATACAATTCCCGAACGGTTCAAGGG
GCGGAGGATCTATGAGCATAATCCGACGGTGACGATTGTGAGGACGGATG
AGGAGGAGAATCGACGAGTCGGGGAGTTTATTGTGGGGAAGTTGAGGAAG
GCGAAGTGGCCCGGGAATGTGGTGGTGATGTTGCCCACTGGGGGAGTCAG
TATGATGGATGTTCCGGGGAATGAGTTCTATGATGGGGATGCGGATGAGG
TGTTGTTTGGGACGGTGGAGAGGGGGTTAGAGGGGTCGGGGGTGAGGGTT
GTGAGGTGTGAGGGGGATGTGAATTGTAAGGAGTTTGCAGAGGATATGGG
GGAGACGTTATTGGGGTTGTTGAAGAATGTATAG back to topCoding sequence (CDS) from alignment at ch8:2121328..2122711- >KJC3_011958-T1 ID=KJC3_011958-T1|Name=KJC3_011958-T1|organism=Aspergillus niger KJC3|type=CDS|length=1293bp|location=Sequence derived from alignment at ch8:2121328..2122711- (Aspergillus niger KJC3)
ATGCCGACCATCCTCCTCCTCGGCACCTGCGACACAAAATGGTCCGAACT
CCTCTACCTCCACTCCCAACTAACCTCTAACCCCTCCATCTCCGTCCTTC
TCATGGACGTCGGCCGCGCCGCCACCTCCTCCCCTCTCATCAACATTCCT
CATCCCAGCCTCAACAACAACAACAACAACAACAACAACAAAACAATCGA
CTACACCCAACTCTCCCAAAACGACTACATCCAAACCATCACCCACCAAT
CCACCCCCACCGTCACCGACCTCTACCACCATGGCAAAATCCACTCCATC
CTCGCCATCGGCGGCAGCTGCGGCACCACCATCGCAACCGCCATCATGCG
CGATGCCCTCCCCATCGGCTTCCCCAAACTCATGGTCTCCACCATGGCCT
CCGGCGACGTGGGGCCCTACATCCAGGAAACAGACATCACCATGATGTAC
AGTGTCGTCGATGTAGCGGGTACAAACAGCATCTTGAATAGAATTCTCCG
CAATGCAGCGGCTGCAGGGACCGGCATGGCCATATCATACTGCGACTACC
TTACCTCCGAGACTACCATCGCTACAAACGGACATACCAAGATAAACTCG
GAAGACGAAAAGAAAACCAAAATCGGCATCACCATGTTCGGCGTAATCAC
CCCCGCGGTCACCCAAATCCGCAGCTACCTCGAATCCCACCTCCCCAACC
AATGTGAAATCTACGTTTTCCATGCCACCGGCTCGGGCGGAAAAGCCATG
GAGCGCCTCATCCGCGAACAACAACTCGACGCCATCGTGGATCTGACCAC
CTCTGAGATCGTGGATGAGCTCGCCGGTGGGGTATTATCCGCCGGACCGG
GCAGGTTAGATGCCGCTGCGGAGAGGGGCATCCCGCAGGTAGTGAGTGTG
GGGGCATGCGATATGATTAATTTCGGGACGAAGGATACAATTCCCGAACG
GTTCAAGGGGCGGAGGATCTATGAGCATAATCCGACGGTGACGATTGTGA
GGACGGATGAGGAGGAGAATCGACGAGTCGGGGAGTTTATTGTGGGGAAG
TTGAGGAAGGCGAAGTGGCCCGGGAATGTGGTGGTGATGTTGCCCACTGG
GGGAGTCAGTATGATGGATGTTCCGGGGAATGAGTTCTATGATGGGGATG
CGGATGAGGTGTTGTTTGGGACGGTGGAGAGGGGGTTAGAGGGGTCGGGG
GTGAGGGTTGTGAGGTGTGAGGGGGATGTGAATTGTAAGGAGTTTGCAGA
GGATATGGGGGAGACGTTATTGGGGTTGTTGAAGAATGTATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011958-T1.utr5p1 | KJC3_011958-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008322 |
| DBxref | PFAM:PF06792 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2121328..2122711 - |
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