You are here

Home

KJC3_011961-T1, KJC3_011961-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011961-T1
Unique NameKJC3_011961-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2127084..2127532+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011961-T1 ID=KJC3_011961-T1|Name=KJC3_011961-T1|organism=Aspergillus niger KJC3|type=mRNA|length=449bp|location=Sequence derived from alignment at ch8:2127084..2127532+ (Aspergillus niger KJC3)
ATCGTAGCAAGGGGCTCTCACTCTCTGGTAGACATCCACCACCGCCAACA
TCCACTAGTTCTTAGCCACCAACTAGAAGCTATCTACACCACGATGAAAA
CCGCCCTAGTCACCCTCTACTCCTGCCTCGGCTTGGGTCTGCCCGCCCTG
GCTGCCCTCATGGAAATCATGCTGAGCAATTCCACCTCGTGCCAGATCCG
TGGCGGGGATAGCATTGCCAATCTTGCCTGTCGGAATACGGTAGGCTGCT
TGTTGCTTTTGTCCAGTGTCATGGAGAGAGACTAATTCAAGGGTTAGTGC
ATTGAACAGGGTGGTGGGTGGACAGGAGGATTCTGTGATGATCAGCAGTA
GGTATCGTTCTGCACTGGAAGTGTGGTAGCTGACCAAGGGTTTAGGATCT
GTCATTGTACGTTTGATATTTCTACTACGGAGTAGATGAGAGCAGAAAG
back to top

Coding sequence (CDS) from alignment at ch8:2127084..2127532+

>KJC3_011961-T1 ID=KJC3_011961-T1|Name=KJC3_011961-T1|organism=Aspergillus niger KJC3|type=CDS|length=711bp|location=Sequence derived from alignment at ch8:2127084..2127532+ (Aspergillus niger KJC3)
ATGAAAACCGCCCTAGTCACCCTCTACTCCTGCCTCGGCTTGGGTCTGCC
CGCCCTGGCTGCCCTCATGGAAATCATGCTGAGCAATTCCACCTCGTGCC
AGATCCGTGGCGGGGATAGCATTGCCAATCTTGCCTGTCGGAATACGTGC
ATTGAACAGGGTGGTGGGTGGACAGGAGGATTCTGTGATGATCAGCAGAT
CTGTCATTGTACGTTTGATATTTCTACTACGGAGTAGATGAAAACCGCCC
TAGTCACCCTCTACTCCTGCCTCGGCTTGGGTCTGCCCGCCCTGGCTGCC
CTCATGGAAATCATGCTGAGCAATTCCACCTCGTGCCAGATCCGTGGCGG
GGATAGCATTGCCAATCTTGCCTGTCGGAATACGTGCATTGAACAGGGTG
GTGGGTGGACAGGAGGATTCTGTGATGATCAGCAGATCTGTCATTGTACG
TTTGATATTTCTACTACGGAGTAGATGAAAACCGCCCTAGTCACCCTCTA
CTCCTGCCTCGGCTTGGGTCTGCCCGCCCTGGCTGCCCTCATGGAAATCA
TGCTGAGCAATTCCACCTCGTGCCAGATCCGTGGCGGGGATAGCATTGCC
AATCTTGCCTGTCGGAATACGTGCATTGAACAGGGTGGTGGGTGGACAGG
AGGATTCTGTGATGATCAGCAGATCTGTCATTGTACGTTTGATATTTCTA
CTACGGAGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011961KJC3_011961Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011961-T1KJC3_011961-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011961-T1.utr5p1KJC3_011961-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011961-T1.exon1KJC3_011961-T1.exon1Aspergillus niger KJC3exon
KJC3_011961-T1.exon2KJC3_011961-T1.exon2Aspergillus niger KJC3exon
KJC3_011961-T1.exon3KJC3_011961-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011961-T1.cdsKJC3_011961-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011961-T1.utr3p1KJC3_011961-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
DBxrefInterPro:IPR036574
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2127084..2127532 +
Powered by Drupal