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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2148745..2152576+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011971-T1 ID=KJC3_011971-T1|Name=KJC3_011971-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3832bp|location=Sequence derived from alignment at ch8:2148745..2152576+ (Aspergillus niger KJC3)
GGACTAACTAACTAACGAAGTGGTGGTCGCTCCTTCCCAATTCTTCCCAT
CGCCGCCTCCTCCTTTTTCGCTCCTTCCATTCTGATTCTCTCACACTCTC
ACTTCCCTTCACACTCTCTCCCTTCCTTCTTCTTCCTCCTCCTCCTCCTT
CTTTCTTTTCCTTCATCCTCCCAAACGTGCTGTGCACTCGTGTTCTCTCT
ACTTCCTTCGTTTTACGCTCGTTCTCTGCTTTTTTGTTGTATCCTTCCAG
CCCCCCCTGTTCTGCTCGGCTCACTGACTCTCCACCAGCGAAAAGGGTGA
GTTTCTCGGCTGCCCTCCCTAGTGCTGGTCTAAGCTGCCCGCCGGCGTTT
CACCCTCCACCCTCTCCCACGCCCCCCCATCCAAATCCCTCTCTCGACCT
CTCCTGATGCCCTCGTCCCTCTCCTCCCATCCCATCCCCTCCGTTTGCTG
GCTTTTCGCTTCCTTCTCTGCCTGACTCGGTCTGGCATTTGGTCTCCTTC
CTCGCCGTCTCTTTCCTTTCGTTCTTTTTCCACGTTTGCTGCCGATTTGA
TATCGCGCACTCCGTCCATCGTTTTCCCTTCGCAAACATACCCCCTAAAA
CCTAACCTTCCCAATTGACACACTCATTGCCAGGTCGTCGTTCGTTTTTT
TCACCACTCCAAGTTTTCCCCATTTTCTCAAGCAGATCGATATTCTGGAA
TTCCATATCTACCATCGCCCTTCTGTGCTCTACCGGGACAATCCCCTGCA
GATATCGCCCTCTCTCGCTCGCTCTCAAATCATACATTGTCCAAATCACG
ACTCCGACTCGCGATCATCGCCTCCCCCGGTTGCTCTCTGCACCCAAGCA
CACGATCCTCTACCTTGTCGATCATGCGATAGTGCTCCGGCAGTCATTCT
TCATCCCTTCTCCGTCCTAACGCCTACGTGCTGAACCTCGGACGGCTGGT
TGTTTCCTGATCGTCTTCGGCTGGTACATTCGAAGAACTTTTCCCTTTTC
TCCCTTCCCCGACACATTCGACATGCTTGTTCCGAAACCTCCCGTGGATT
TGGAGGGTCACTGCTCTGCTCTATACGACAACGCTCTCTACACCTACTCC
GCCAATGGCTTTCTATCGATACCCCTCGAGCGCAATGGAAACTGGACCCA
ATTGACCATGGGTGAGGCTGTCTCAGACGCAGCGTGTGTAATCGGTGGCA
CAGACGGCGATGAGACCAAGCAATCCCTCTATGTCATTGGCGGATCCGGC
TCGTCGAGTCAACCGGGCTTGCAGCGATACTCGTTTCAAGACAAGACGTG
GACCACCATTCAACCCCCGCAATCGGTCATGGGGAACCGTACTCACCACA
AGGCCGTCTACCTGTCGAATTCTTCCTCTATTCTGGTCTATGGTGGCCAC
CAGACCGACGAAACTGTTGCATCTTCCGACACATACGTTCTCAGTACCGT
ATCGCCTTACTCCATTGCGGCCCACAATGCGACGGAAGCGTCACCGGCCG
TCAACCCGGTTCTGTTGCCATGGAATGATCGCGAGGCGGCGTTGGTTGGC
GGTACCACAACCCCAAAGAAAGTGCACCTATTCAACCCGACTGCGGGCTG
GTATGGATCCAACGTGACACTGTCCCAGTCGCTATCCAGTGGCGTGCAGT
GCGCCATTCTTGAAGGATCCGACGGAAGCAAGGTGCTGGAGGAGTTCGAC
ATGGACGTTGCGCCCAACACTGTCTCGAGCGTGGTGTTGGTGAATTCGTC
CGGGAAGGAGCAGAACCCTGCTACCGCCATCAGTTCATCCTCGTCACGCA
AACGGAAGAGAGAAGTTACCCTCAGCAGTTACCCGACCTACGATAGTAGC
CTAGCGCAGTCCACAACACGGCAGAACTACTCCCTAGCTCAGGGGGAGGA
TGGGTTGGTAGTGATCTCTAGTGGCAGTGGCACGGACTCCTTGGCCATCT
TCAACCAAACCGCCAACAGCTGGGTCAACGCTACCAAATTGTTCTACGGT
GACGAGAGCCGGCAGCAGATTCTCGGGTCATCCACAACGACGGCATCTAC
ATCCACAGCAACGTCGACCTCCAGCGCATCCTCCAGCGCCGGCGCCGGCG
GCTCGTCCAGCAGCGATGTCGGCACCATAGTCGGCGCCACCCTGGGAGCG
ATCCTGGGTGTCGCCGCTATCCTGGTGATCATTCTCCTGCTTATCAAACG
TAAGAAGCAGAATATGAAGAAAGCCCGAGGCGAAAGCGACAAAGATCGGC
TCAGTTTCCAGGACCAGGGTGTGGAGCCATTGACCCAGTCAGCGTACCCC
ATGGCCAAGAGCCCAGTCCCGCTTGCAGCTTCCTCGGTAGACTCGCTTGC
AATCTTCTCGGGCAAGGTGGGTGATGAGAAGACCCCGAGGCCGGCTGGTG
CCCGTCCTACCTTTGCACAGAACTCGACTCCGCTGAAGTCGAGCCCTCTG
ACGACCATTCATTCCACCGGAGAAGCCTCGTCACCTAGTGTGTACTCGAG
TGCTGCCTTTGATAAAGAGATCGAGGCTCAGAACTCCACCTCCGGGGGTC
GCCCAGGGGACCGGAGAACCAATGAAGGGTGGAGTCGCTACTTCCAAGAC
AACAGTGCAACAAGCTTGGTTGGAATGCAATCCCAAACTCTCCAGCCCCC
ATCAGGCGCATCGTCTGCCAAGCCGCAGCCGAAAGGCGCCGCATGGCAGA
TGAAGACTCTCACACCCCTGGATTTTGGCTTCTTGGATGAGCCAAAGCCT
CTAGGACAGGTAATAAGCGGTAGCCCCACAACGGAGCATGCCTCGTCTAT
CATCTCCTCCGAGGGTCGCCCTGTTGCAATCCAAGAGAGTCAGTCAGCTC
GCATCTCTAGCGCTTCGTCGATGAGTGCCGAGCTGGAGGGTGACGGGCCC
TGGCCACAGCGCAGCTGGGCGGACCGGCCTCCCAGTAGTACCTACAGCAG
AAGTTTCTACAACCCCAGCACGCATGTGCCTTCAATAGCAGTGCCATCCG
AAAGTGACTACCGAACACTCGACCCGTCTCGCACCAACACACGCGGTTCA
AGCGTTCTTATACCCGAAGAAGTGGAACCGATGCCGCCACGCCATCCTAC
TAATGTCAACTCGGACATGAGTTGGCTGAACTTGAATGCCGATCGATGAG
CGCCCCCCTAACGTCTTCTGGACCGACTCACATGACTGCCACTCATCTCC
AAACGTCGCATCTGGACTCTTTCACGCTCATTTACCCTCATTGATCTCTG
CGCCATCACCCACCGCTCTGACCTGATTCCTTCATTGCATTAGCCTGGCT
CCTCCATGGTACCCCTCAGAAGATGCATTCTGTAAAAGTTTCGTTCCCTC
CACCTCGTTGGGATGTACAGCTAGCTGCGCTTGACCGTTTCCTTTCTCCC
TTGTTCCCACATGTTCTCTGCCAGGTTTCCTCCTGTCTAATGGGTACCCG
CACCCCTGCTTGACCGCTTTGCTTATCAACGTATCTGTTGCATTTGTCTT
GCTTCCATCCTGCTGGCAAAAGAATCGAGCGTTCCGTTCTCTCTTTCCTT
GCTGCGCCTGTCCGTCTGTTCCTGTTCGTGCTAGGACACAATTCTTCTCC
TTACTCGCCTACCATCGTCATCTTGCATGTAGTAGTACTACTGTCTCGTT
TTGGTTCTGCGCTTGCTTGATTGATTGATTGATCAATGATCTGATATTCT
GGTTGTTCTGTTGACGATTCCTGCCCATCTATTTAGCAGGTGTGTCTGCT
TTTTTTTGAGATATCATACCCGGTGTTGTGCTGTCTTGATTTGTCTCCTT
GCTCATGTGTGTGTGTGTGTGTGTGTGTGTGT back to topCoding sequence (CDS) from alignment at ch8:2148745..2152576+ >KJC3_011971-T1 ID=KJC3_011971-T1|Name=KJC3_011971-T1|organism=Aspergillus niger KJC3|type=CDS|length=2127bp|location=Sequence derived from alignment at ch8:2148745..2152576+ (Aspergillus niger KJC3)
ATGCTTGTTCCGAAACCTCCCGTGGATTTGGAGGGTCACTGCTCTGCTCT
ATACGACAACGCTCTCTACACCTACTCCGCCAATGGCTTTCTATCGATAC
CCCTCGAGCGCAATGGAAACTGGACCCAATTGACCATGGGTGAGGCTGTC
TCAGACGCAGCGTGTGTAATCGGTGGCACAGACGGCGATGAGACCAAGCA
ATCCCTCTATGTCATTGGCGGATCCGGCTCGTCGAGTCAACCGGGCTTGC
AGCGATACTCGTTTCAAGACAAGACGTGGACCACCATTCAACCCCCGCAA
TCGGTCATGGGGAACCGTACTCACCACAAGGCCGTCTACCTGTCGAATTC
TTCCTCTATTCTGGTCTATGGTGGCCACCAGACCGACGAAACTGTTGCAT
CTTCCGACACATACGTTCTCAGTACCGTATCGCCTTACTCCATTGCGGCC
CACAATGCGACGGAAGCGTCACCGGCCGTCAACCCGGTTCTGTTGCCATG
GAATGATCGCGAGGCGGCGTTGGTTGGCGGTACCACAACCCCAAAGAAAG
TGCACCTATTCAACCCGACTGCGGGCTGGTATGGATCCAACGTGACACTG
TCCCAGTCGCTATCCAGTGGCGTGCAGTGCGCCATTCTTGAAGGATCCGA
CGGAAGCAAGGTGCTGGAGGAGTTCGACATGGACGTTGCGCCCAACACTG
TCTCGAGCGTGGTGTTGGTGAATTCGTCCGGGAAGGAGCAGAACCCTGCT
ACCGCCATCAGTTCATCCTCGTCACGCAAACGGAAGAGAGAAGTTACCCT
CAGCAGTTACCCGACCTACGATAGTAGCCTAGCGCAGTCCACAACACGGC
AGAACTACTCCCTAGCTCAGGGGGAGGATGGGTTGGTAGTGATCTCTAGT
GGCAGTGGCACGGACTCCTTGGCCATCTTCAACCAAACCGCCAACAGCTG
GGTCAACGCTACCAAATTGTTCTACGGTGACGAGAGCCGGCAGCAGATTC
TCGGGTCATCCACAACGACGGCATCTACATCCACAGCAACGTCGACCTCC
AGCGCATCCTCCAGCGCCGGCGCCGGCGGCTCGTCCAGCAGCGATGTCGG
CACCATAGTCGGCGCCACCCTGGGAGCGATCCTGGGTGTCGCCGCTATCC
TGGTGATCATTCTCCTGCTTATCAAACGTAAGAAGCAGAATATGAAGAAA
GCCCGAGGCGAAAGCGACAAAGATCGGCTCAGTTTCCAGGACCAGGGTGT
GGAGCCATTGACCCAGTCAGCGTACCCCATGGCCAAGAGCCCAGTCCCGC
TTGCAGCTTCCTCGGTAGACTCGCTTGCAATCTTCTCGGGCAAGGTGGGT
GATGAGAAGACCCCGAGGCCGGCTGGTGCCCGTCCTACCTTTGCACAGAA
CTCGACTCCGCTGAAGTCGAGCCCTCTGACGACCATTCATTCCACCGGAG
AAGCCTCGTCACCTAGTGTGTACTCGAGTGCTGCCTTTGATAAAGAGATC
GAGGCTCAGAACTCCACCTCCGGGGGTCGCCCAGGGGACCGGAGAACCAA
TGAAGGGTGGAGTCGCTACTTCCAAGACAACAGTGCAACAAGCTTGGTTG
GAATGCAATCCCAAACTCTCCAGCCCCCATCAGGCGCATCGTCTGCCAAG
CCGCAGCCGAAAGGCGCCGCATGGCAGATGAAGACTCTCACACCCCTGGA
TTTTGGCTTCTTGGATGAGCCAAAGCCTCTAGGACAGGTAATAAGCGGTA
GCCCCACAACGGAGCATGCCTCGTCTATCATCTCCTCCGAGGGTCGCCCT
GTTGCAATCCAAGAGAGTCAGTCAGCTCGCATCTCTAGCGCTTCGTCGAT
GAGTGCCGAGCTGGAGGGTGACGGGCCCTGGCCACAGCGCAGCTGGGCGG
ACCGGCCTCCCAGTAGTACCTACAGCAGAAGTTTCTACAACCCCAGCACG
CATGTGCCTTCAATAGCAGTGCCATCCGAAAGTGACTACCGAACACTCGA
CCCGTCTCGCACCAACACACGCGGTTCAAGCGTTCTTATACCCGAAGAAG
TGGAACCGATGCCGCCACGCCATCCTACTAATGTCAACTCGGACATGAGT
TGGCTGAACTTGAATGCCGATCGATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011971-T1.utr5p1 | KJC3_011971-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011971-T1.utr3p1 | KJC3_011971-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011043 |
| DBxref | InterPro:IPR015915 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2148745..2152576 + |
|
