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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2152683..2155460- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011972-T1 ID=KJC3_011972-T1|Name=KJC3_011972-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2778bp|location=Sequence derived from alignment at ch8:2152683..2155460- (Aspergillus niger KJC3)
CATTCATCGACTTAACAGATAGTAAGGTGAGTCTCCACTTTGCACAGATG
TCATCATCCGACAAAACGGGTTTCAGTGTGCGGGTGCCCCGAAACACCGG
CGGGACTCTCCTGTCACCAATGAATTGAAGGTGAGGCTGCACAAGCAGTG
AAATCCTATACTGCACTACCAAATCGTACCTGCCTTAAATGGGTGCATCT
GCCCCTACGTCACGGGCGCTTGCCCCGCTGTCTCGCTCTTTCCCTCCCCA
GTCGCCACTGCCATTTTTACTTCTTCTCGTCTTCTTCTTCTTTCTTCTTC
CCTTTCCACCTCAACATCACCTCCACTCTTCTTCTTCTTCTTCTTCTACT
ACAATCCTCCACTATCCCCATCAGCTTTCATCAATTCCTTTTCATAACAC
CACTCCCTTCATCCATCTAATGATCACCCCCATCTAGATCTTCGTTTCTC
AACAGTCCCTTGAACCCGGACAATGACCCACTACGAAAGCCGTCAGTACG
CCCGGCCTCCCGGCGGCTACAATCCTGACTATTACTATGGTGCCCCTCCT
CATGGCACCGCTCGTCACCAAACAGATGTCGTCCGTCGTCGCGATGGCAG
CGTTGATTCCTACGATGCCCCTCCGCGCGACTACCCGCCTGGCGATTATG
GCTACGAATACGGCTACGGCATCCCCCCTCAGGCCAGACCGTCCCGTGTC
TCCACCCTCTCGGAGGGGGTGCGCAGATCCCACTCTATGGGCCATCGTGA
TCCCTATTACGATGACTCGGACTACTACCGTCGATCCCACCGCCGTTCGA
GGCGACATGATGACCGACGTATGTATCTCATGTCTCGGACAGATAGCACG
CCAAAGAGTACAAAGCTACTGAGAGTAAGTCGCCTGCTGACATACATTCG
CAGGTGATCGCCCCAGATACTCTCGTTCTCCATCGGACAGCCGCTCTCCC
CCAAGACGACGTCGCAAGTCCATCTCTGAGCAGGCCTTGGGTGCTCTAGG
TCTAGGGTCACTCGCCTCATCTGGATCCCATCATCGCGAACATGATCGTG
GTCGCTCACATACCCGGGATCGTAAGTCTTACTCCTACTCGCCCTCGCCC
ACCCGGGACAGAAGCCGTCACCGACGGGAGAAGAGTGAGCAGCGCATCGC
CCAGGCTGTTCGAGCGGCTCTGGCTGCGGGGGCCATAGAGGCCTTTCGTG
TTCGCAAGGACCCTGGCGAGTGGACCGGTGAAAAGGGCAAGCGCATCCTT
ACAGCTGCGATCACGGCCGGCGGTACCGATGGACTTGTGGACCGAGACCC
GAAGAAACATTCCAAGCGCCATGTCGTCGAATCCACCCTGGCGGGTCTGG
CTGCCAACCATTTCATCAACGGATCAAGATCCCGGTCGAGGTCTCGTGGC
CGGGGTCGCTCGCAAAGCCAGGGTGGACTGAAGAATCTGGTTGCCACAGG
GGCCCTGGCCGCGGCTGGGAAGGAGGCCTATGATCGTTTCCGATCCAAGT
CTCGCCCTCGGAGTCGGAGCCGAGGCCGGGGCCGGTCCAGCTCTCGGGAT
AGCTACGACGACCGTCGCCCCCGCAAACGGAGCAAGAGCGTGACCGACTA
CATCAACCAAGGAATGGAAGCACTAGGCCTAGGACAAAAGGACAGCCGTG
ACAGGAGAGCTCATGGCGGCCGCTCGTCTCGTCGCGACGTCTATTCGGAC
GACGAGCTCTCGAGTGAGGACGAGCCCCGACAGCATCACAGCCCACGGCG
CTCCAGACACTCTAGAGATGTGAGTCGACCTTTATCTACCGTCACCACCT
CGACACGACCTTCCACACGCACCACATCCAAAGGAATCGGCGAAGCTGGT
CATGGTCGTGTCAACAGCCCTCATGGAGGTGGTCAATCCGAGGATTCTGA
TTCTGACCTGGGAAGCAGTACCGATGAAGAACACCAACGCAAAAAACTTA
CCCGGAAAACCCTAGTGAAATCCGGCCTGGCCGCGGTGGCCACCATCCAC
GCCGCACATAGTCTGCACGAAAGTATGGAAAAACACAAAAAACGAGCGGA
GATGGTTCGCGAGGGTGAGCTTTCACCGGAAGAAGCCCGTCGTCTTCGGA
TCAAGGGTCAGCTAGGCGATGTAGCCAGCGTCGGCCTGGCCGCCCTGGGG
ATCAAAGGTGCAATCGGAGAATGGAAGCATGTGGAAGAAGCCCGCCGTGA
GCGACATGAATTTGCGAAAAGCTGCGACGAACGACGAGAGCGCCGACACC
GCCGTGTACAGAGCCAAGGACCGACGGCTCGACCGCCGCGGACCATATAC
CCTGACGAGATTGAGGAGCATCATCCATCGGAGTATGGATCAACATCAGA
TCTTCGATCCCGGTCTGTGGGACGATCGTCCAGAACGCCTGTCACACCAT
ATGCTTGAAATGAAGAAATGTAAAAATGAGCGATATTGAATTGCAGACAT
GTGCTATGATAATGATTGATGATTGATGAACCTTTCGTTTTTATGCAAAG
TTTGTTGTGTTATTCCTATGCAAATTGATAATAGTCTTTCCTTTGAATGT
TCTTGACGTTCGCCAGTTGACTACTGATGTTGTATACGTACACGCGCCTG
CTTGTCTTCACATGCATGTTACTTTGTCGACTATCCACCTATTTCTCTTT
CGGTATAGCTGATTTTCCCAATAATTTACTGTAGCTTACAGATAGTATTA
CAGCACTGTTTCGATTTCATGGCTTCTAAGACATACAATACAGTGATTAC
TTAGAAAGCGAACAGTGAAATGAACGGC back to topCoding sequence (CDS) from alignment at ch8:2152683..2155460- >KJC3_011972-T1 ID=KJC3_011972-T1|Name=KJC3_011972-T1|organism=Aspergillus niger KJC3|type=CDS|length=3702bp|location=Sequence derived from alignment at ch8:2152683..2155460- (Aspergillus niger KJC3)
GTGATCGCCCCAGATACTCTCGTTCTCCATCGGACAGCCGCTCTCCCCCA
AGACGACGTCGCAAGTCCATCTCTGAGCAGGCCTTGGGTGCTCTAGGTCT
AGGGTCACTCGCCTCATCTGGATCCCATCATCGCGAACATGATCGTGGTC
GCTCACATACCCGGGATCGTAAGTCTTACTCCTACTCGCCCTCGCCCACC
CGGGACAGAAGCCGTCACCGACGGGAGAAGAGTGAGCAGCGCATCGCCCA
GGCTGTTCGAGCGGCTCTGGCTGCGGGGGCCATAGAGGCCTTTCGTGTTC
GCAAGGACCCTGGCGAGTGGACCGGTGAAAAGGGCAAGCGCATCCTTACA
GCTGCGATCACGGCCGGCGGTACCGATGGACTTGTGGACCGAGACCCGAA
GAAACATTCCAAGCGCCATGTCGTCGAATCCACCCTGGCGGGTCTGGCTG
CCAACCATTTCATCAACGGATCAAGATCCCGGTCGAGGTCTCGTGGCCGG
GGTCGCTCGCAAAGCCAGGGTGGACTGAAGAATCTGGTTGCCACAGGGGC
CCTGGCCGCGGCTGGGAAGGAGGCCTATGATCGTTTCCGATCCAAGTCTC
GCCCTCGGAGTCGGAGCCGAGGCCGGGGCCGGTCCAGCTCTCGGGATAGC
TACGACGACCGTCGCCCCCGCAAACGGAGCAAGAGCGTGACCGACTACAT
CAACCAAGGAATGGAAGCACTAGGCCTAGGACAAAAGGACAGCCGTGACA
GGAGAGCTCATGGCGGCCGCTCGTCTCGTCGCGACGTCTATTCGGACGAC
GAGCTCTCGAGTGAGGACGAGCCCCGACAGCATCACAGCCCACGGCGCTC
CAGACACTCTAGAGATGTGAGTCGACCTTTATCTACCGTCACCACCTCGA
CACGACCTTCCACACGCACCACATCCAAAGGAATCGGCGAAGCTGGTCAT
GGTCGTGTCAACAGCCCTCATGGAGGTGGTCAATCCGAGGATTCTGATTC
TGACCTGGGAAGCAGTACCGATGAAGAACACCAACGCAAAAAACTTACCC
GGAAAACCCTAGTGAAATCCGGCCTGGCCGCGGTGGCCACCATCCACGCC
GCACATAGTCTGCACGAAAGTATGGAAAAACACAAAAAACGAGCGGAGAT
GGTTCGCGAGGGTGAGCTTTCACCGGAAGAAGCCCGTCGTCTTCGGATCA
AGGGTCAGCTAGGCGATGTAGCCAGCGTCGGCCTGGCCGCCCTGGGGATC
AAAGGTGCAATCGGAGAATGGAAGCATGTGGAAGAAGCCCGCCGTGAGCG
ACATGAATTTGCGAAAAGCTGCGACGAACGACGAGAGCGCCGACACCGCC
GTGTACAGAGCCAAGGACCGACGGCTCGACCGCCGCGGACCATATACCCT
GACGAGATTGAGGAGCATCATCCATCGGAGTATGGATCAACATCAGATCT
TCGATCCCGGTCTGTGGGACGATCGTCCAGAACGCCTGTCACACCATATG
CTTGAATGACCCACTACGAAAGCCGTCAGTACGCCCGGCCTCCCGGCGGC
TACAATCCTGACTATTACTATGGTGCCCCTCCTCATGGCACCGCTCGTCA
CCAAACAGATGTCGTCCGTCGTCGCGATGGCAGCGTTGATTCCTACGATG
CCCCTCCGCGCGACTACCCGCCTGGCGATTATGGCTACGAATACGGCTAC
GGCATCCCCCCTCAGGCCAGACCGTCCCGTGTCTCCACCCTCTCGGAGGG
GGTGCGCAGATCCCACTCTATGGGCCATCGTGATCCCTATTACGATGACT
CGGACTACTACCGTCGATCCCACCGCCGTTCGAGGCGACATGATGACCGA
CGTGATCGCCCCAGATACTCTCGTTCTCCATCGGACAGCCGCTCTCCCCC
AAGACGACGTCGCAAGTCCATCTCTGAGCAGGCCTTGGGTGCTCTAGGTC
TAGGGTCACTCGCCTCATCTGGATCCCATCATCGCGAACATGATCGTGGT
CGCTCACATACCCGGGATCGTAAGTCTTACTCCTACTCGCCCTCGCCCAC
CCGGGACAGAAGCCGTCACCGACGGGAGAAGAGTGAGCAGCGCATCGCCC
AGGCTGTTCGAGCGGCTCTGGCTGCGGGGGCCATAGAGGCCTTTCGTGTT
CGCAAGGACCCTGGCGAGTGGACCGGTGAAAAGGGCAAGCGCATCCTTAC
AGCTGCGATCACGGCCGGCGGTACCGATGGACTTGTGGACCGAGACCCGA
AGAAACATTCCAAGCGCCATGTCGTCGAATCCACCCTGGCGGGTCTGGCT
GCCAACCATTTCATCAACGGATCAAGATCCCGGTCGAGGTCTCGTGGCCG
GGGTCGCTCGCAAAGCCAGGGTGGACTGAAGAATCTGGTTGCCACAGGGG
CCCTGGCCGCGGCTGGGAAGGAGGCCTATGATCGTTTCCGATCCAAGTCT
CGCCCTCGGAGTCGGAGCCGAGGCCGGGGCCGGTCCAGCTCTCGGGATAG
CTACGACGACCGTCGCCCCCGCAAACGGAGCAAGAGCGTGACCGACTACA
TCAACCAAGGAATGGAAGCACTAGGCCTAGGACAAAAGGACAGCCGTGAC
AGGAGAGCTCATGGCGGCCGCTCGTCTCGTCGCGACGTCTATTCGGACGA
CGAGCTCTCGAGTGAGGACGAGCCCCGACAGCATCACAGCCCACGGCGCT
CCAGACACTCTAGAGATGTGAGTCGACCTTTATCTACCGTCACCACCTCG
ACACGACCTTCCACACGCACCACATCCAAAGGAATCGGCGAAGCTGGTCA
TGGTCGTGTCAACAGCCCTCATGGAGGTGGTCAATCCGAGGATTCTGATT
CTGACCTGGGAAGCAGTACCGATGAAGAACACCAACGCAAAAAACTTACC
CGGAAAACCCTAGTGAAATCCGGCCTGGCCGCGGTGGCCACCATCCACGC
CGCACATAGTCTGCACGAAAGTATGGAAAAACACAAAAAACGAGCGGAGA
TGGTTCGCGAGGGTGAGCTTTCACCGGAAGAAGCCCGTCGTCTTCGGATC
AAGGGTCAGCTAGGCGATGTAGCCAGCGTCGGCCTGGCCGCCCTGGGGAT
CAAAGGTGCAATCGGAGAATGGAAGCATGTGGAAGAAGCCCGCCGTGAGC
GACATGAATTTGCGAAAAGCTGCGACGAACGACGAGAGCGCCGACACCGC
CGTGTACAGAGCCAAGGACCGACGGCTCGACCGCCGCGGACCATATACCC
TGACGAGATTGAGGAGCATCATCCATCGGAGTATGGATCAACATCAGATC
TTCGATCCCGGTCTGTGGGACGATCGTCCAGAACGCCTGTCACACCATAT
GCTTGAATGACCCACTACGAAAGCCGTCAGTACGCCCGGCCTCCCGGCGG
CTACAATCCTGACTATTACTATGGTGCCCCTCCTCATGGCACCGCTCGTC
ACCAAACAGATGTCGTCCGTCGTCGCGATGGCAGCGTTGATTCCTACGAT
GCCCCTCCGCGCGACTACCCGCCTGGCGATTATGGCTACGAATACGGCTA
CGGCATCCCCCCTCAGGCCAGACCGTCCCGTGTCTCCACCCTCTCGGAGG
GGGTGCGCAGATCCCACTCTATGGGCCATCGTGATCCCTATTACGATGAC
TCGGACTACTACCGTCGATCCCACCGCCGTTCGAGGCGACATGATGACCG
AC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011972-T1.utr3p1 | KJC3_011972-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011972-T1.utr5p1 | KJC3_011972-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2152683..2155460 - |
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