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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2175097..2176873+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011977-T1 ID=KJC3_011977-T1|Name=KJC3_011977-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1777bp|location=Sequence derived from alignment at ch8:2175097..2176873+ (Aspergillus niger KJC3)
CTCACTCCTCCGGCCAGTGCCAGTAACACTCCTAAAGGCCCACAGCTGTC
GCTCAATTCTCTCCGTCATTCACTCTCCAACTCTGCTGAAAGCGGGCCCC
CCTCTCCTGTCAACCACCATGACGGAATCTCCGGGCTCCCCCCTCTCCTC
CATTGCTTCCGACGACATGTCGGATCGCGACGACCTAAAGCAAGGCTTCT
CCCCCTCGGGCTCCAACATGCCTCCCTCTAAGCGTCGTCGCACTGGTGTT
GCTTCTTGGGATCGCAATACTCCCGTCTCGACCACTTTCCAAGATGACCT
CCCTCCTCCTTCTCCCTCCACCTCCATCTCGTCCGATACCTCCGGCGACA
TTCCCAATTCTCCTAACACCCTCGCTCTCATCGGAGGCAGTCAGGATGAT
GACTACAGCGGCCAAGGCAACGATCAAGTCACCATCTGTCGCTGGGATGG
ATGCGACGCCGGTGACCTAGGCAACATGGACGGTCTCGTAAAGCACATAC
ATGAAGAACATGTCGGGAGCCGACAGAAGAAATACTCCTGCGAATGGTCC
GATTGCAGTCGGAAGGGCCAAACGCACGCAAGTGGCTATGCGCTGCGCGC
ACACATGAGAAGCCATACGCGAGAAAAGCCCTTCTATTGCGCTCTACCAG
GTAAGTTTCCCCAGACCTTCCCCGTTATAAGTTCCTTTCTTGTTATCCCT
TGGCAGCGTCTAACATTGTTCCTTGATATTTGCCTATAGAATGCGACCGC
AGCTTCACTCGATCAGATGCCCTTGCCAAACACATGAGAACTGTCCATGA
AACAGAGGCGCTTCGTCCCTCCGACCCCGTACCCAAACACCACAATGTCG
CTGCTTCGGCGGCAGGAACGCCGACCGCGACTCCGTCTGGCAAGATCCAA
CGATTGAAGCTGAAGCTATCGTTTCCACCGAAGGACGATGCAGGAGATCA
TAGCGAAAGTGCCAATGAGGAGGGCGCAGGACTGGAGGACGATCTTCACG
TACCTCCTGGTGGGTTGGAGAAGGAATTCGACACCTACGAGATGCTGCTC
GAAGGCCCGCAACTGTATCGGTTGCTTCTGAGACAGATCCATTGGGCACA
GCAGGATGGCGCGGAGCTACGCGACGCATGGGAAAAGATTCGCGTCAAGA
GAAAGGAATCTTGGATGGAGAAGGAGGCGATCTTCGATGATCTGATGGAG
GCCGAGGTACGATTGTTCAAGCTCCTTGATGAGAAATTCAGCGTGTCCAA
GTCTGCGCCGGCAAATGGGACGGATAATCCGCCGCAGTCGGAGCAGCCAA
TGGAGGTAGATGTTGCACAAGACCAGGGGTCTGGATCTGTTCCTCCATGA
TGCGATTGTTGATCTTGAATGTGATGGTCATTTAATATATCCTTCTTGAT
TTGATCACTCCTGCCTTTCCTATTGCTCTTTCCCCCTCTTTGCCCTTGTA
CTTTACCTTCTTGTTTTGGGGGCTTCTTTTTGGGATTTTCTTTCTTGGGG
CTGCTGGTAATGACTTAGCTACGGAATTGGGCCACGTCACGTCTCTTGTG
ATAAAAAAACGTGTCACTACTACTCATATTCCATTCTTTCCCCCCTTATC
ATACACCTTTTCTCTCCATTGTTTTACCACGTCACGGGACATGCAGGGAC
TTGATCAATTCCGGATTAGTTCAATTCGTTTCGCTTCGTTTCGCTTTCGT
TATCGCAAAATATCCTGGTCTTTACTACTATTATTACCTGTCTGCTGTTT
GTAACTTACGAAATGGGATTGGCGCTT back to topCoding sequence (CDS) from alignment at ch8:2175097..2176873+ >KJC3_011977-T1 ID=KJC3_011977-T1|Name=KJC3_011977-T1|organism=Aspergillus niger KJC3|type=CDS|length=2286bp|location=Sequence derived from alignment at ch8:2175097..2176873+ (Aspergillus niger KJC3)
ATGACGGAATCTCCGGGCTCCCCCCTCTCCTCCATTGCTTCCGACGACAT
GTCGGATCGCGACGACCTAAAGCAAGGCTTCTCCCCCTCGGGCTCCAACA
TGCCTCCCTCTAAGCGTCGTCGCACTGGTGTTGCTTCTTGGGATCGCAAT
ACTCCCGTCTCGACCACTTTCCAAGATGACCTCCCTCCTCCTTCTCCCTC
CACCTCCATCTCGTCCGATACCTCCGGCGACATTCCCAATTCTCCTAACA
CCCTCGCTCTCATCGGAGGCAGTCAGGATGATGACTACAGCGGCCAAGGC
AACGATCAAGTCACCATCTGTCGCTGGGATGGATGCGACGCCGGTGACCT
AGGCAACATGGACGGTCTCGTAAAGCACATACATGAAGAACATGTCGGGA
GCCGACAGAAGAAATACTCCTGCGAATGGTCCGATTGCAGTCGGAAGGGC
CAAACGCACGCAAGTGGCTATGCGCTGCGCGCACACATGAGAAGCCATAC
GCGAGAAAAGCCCTTCTATTGCGCTCTACCAGAATGCGACCGCAGCTTCA
CTCGATCAGATGCCCTTGCCAAACACATGAGAACTGTCCATGAAACAGAG
GCGCTTCGTCCCTCCGACCCCGTACCCAAACACCACAATGTCGCTGCTTC
GGCGGCAGGAACGCCGACCGCGACTCCGTCTGGCAAGATCCAACGATTGA
AGCTGAAGCTATCGTTTCCACCGAAGGACGATGCAGGAGATCATAGCGAA
AGTGCCAATGAGGAGGGCGCAGGACTGGAGGACGATCTTCACGTACCTCC
TGGTGGGTTGGAGAAGGAATTCGACACCTACGAGATGCTGCTCGAAGGCC
CGCAACTGTATCGGTTGCTTCTGAGACAGATCCATTGGGCACAGCAGGAT
GGCGCGGAGCTACGCGACGCATGGGAAAAGATTCGCGTCAAGAGAAAGGA
ATCTTGGATGGAGAAGGAGGCGATCTTCGATGATCTGATGGAGGCCGAGG
TACGATTGTTCAAGCTCCTTGATGAGAAATTCAGCGTGTCCAAGTCTGCG
CCGGCAAATGGGACGGATAATCCGCCGCAGTCGGAGCAGCCAATGGAGGT
AGATGTTGCACAAGACCAGGGGTCTGGATCTGTTCCTCCATGAATGACGG
AATCTCCGGGCTCCCCCCTCTCCTCCATTGCTTCCGACGACATGTCGGAT
CGCGACGACCTAAAGCAAGGCTTCTCCCCCTCGGGCTCCAACATGCCTCC
CTCTAAGCGTCGTCGCACTGGTGTTGCTTCTTGGGATCGCAATACTCCCG
TCTCGACCACTTTCCAAGATGACCTCCCTCCTCCTTCTCCCTCCACCTCC
ATCTCGTCCGATACCTCCGGCGACATTCCCAATTCTCCTAACACCCTCGC
TCTCATCGGAGGCAGTCAGGATGATGACTACAGCGGCCAAGGCAACGATC
AAGTCACCATCTGTCGCTGGGATGGATGCGACGCCGGTGACCTAGGCAAC
ATGGACGGTCTCGTAAAGCACATACATGAAGAACATGTCGGGAGCCGACA
GAAGAAATACTCCTGCGAATGGTCCGATTGCAGTCGGAAGGGCCAAACGC
ACGCAAGTGGCTATGCGCTGCGCGCACACATGAGAAGCCATACGCGAGAA
AAGCCCTTCTATTGCGCTCTACCAGAATGCGACCGCAGCTTCACTCGATC
AGATGCCCTTGCCAAACACATGAGAACTGTCCATGAAACAGAGGCGCTTC
GTCCCTCCGACCCCGTACCCAAACACCACAATGTCGCTGCTTCGGCGGCA
GGAACGCCGACCGCGACTCCGTCTGGCAAGATCCAACGATTGAAGCTGAA
GCTATCGTTTCCACCGAAGGACGATGCAGGAGATCATAGCGAAAGTGCCA
ATGAGGAGGGCGCAGGACTGGAGGACGATCTTCACGTACCTCCTGGTGGG
TTGGAGAAGGAATTCGACACCTACGAGATGCTGCTCGAAGGCCCGCAACT
GTATCGGTTGCTTCTGAGACAGATCCATTGGGCACAGCAGGATGGCGCGG
AGCTACGCGACGCATGGGAAAAGATTCGCGTCAAGAGAAAGGAATCTTGG
ATGGAGAAGGAGGCGATCTTCGATGATCTGATGGAGGCCGAGGTACGATT
GTTCAAGCTCCTTGATGAGAAATTCAGCGTGTCCAAGTCTGCGCCGGCAA
ATGGGACGGATAATCCGCCGCAGTCGGAGCAGCCAATGGAGGTAGATGTT
GCACAAGACCAGGGGTCTGGATCTGTTCCTCCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011977-T1.utr5p1 | KJC3_011977-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011977-T1.utr3p1 | KJC3_011977-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| DBxref | PFAM:PF13912 |
| DBxref | PFAM:PF00096 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2175097..2176873 + |
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