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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2196948..2197644- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011984-T1 ID=KJC3_011984-T1|Name=KJC3_011984-T1|organism=Aspergillus niger KJC3|type=mRNA|length=697bp|location=Sequence derived from alignment at ch8:2196948..2197644- (Aspergillus niger KJC3)
ACCAACATCACCCACCACCGCCACTTTTCCAATCTTCTGATCTGTCATTT
CTCATTCCTCACCTCTCCTCCTCCTCCCGCCTCCCTCTTCGTTTCCTTCG
TACGACCCCTCCTTTCACCTCCCTAGAGCCACCTGTCCGCTCTCACTCCC
CCTCCCACGCCTACCCATCATGTCGAATCCCACCGCGACCCAGGACACCA
AGGCCGAGCCTACCCAACAGCCACAGCAACAGAAGCCCCCCGTGCTGGAA
GAAGATGACGAGTTTGAGGACTTCCCCGTTGAAGGTTAGCCACAAACCAC
ACAGACCGCTGGTCTTTCCTGTCATGCAGAAGAGGGAGCTTCGCTCCGCC
CAGACAGCCGGCAAAAATGATCTTACGGAGGACGGGTTGCGCTGACCTCG
GAGCTTTAATTGCAGACTGGCCTCAGGAGGAAACCGAACAAGGATCTGCT
GCCAACGGCGCAAGCGCTCATTTGTGGGAGGAGAGCTGGGATGATGACGA
TGCGGCCGAGGACTTCTCGAAGCAACTGAAGTACGTTTTCCCAAGCCAAG
CCAAACCGAATCAAAACTCATCAGTCAATGCGATGAGCGCAATATGTTGC
CATTGATCTACACCTCATCTAAAGCTCAAATTGGACTAACATGTTTGCTT
CGAACTACAGAGAGGAGCTGAAGAAGGTCGGGGCGTCTAATCAATAG back to topCoding sequence (CDS) from alignment at ch8:2196948..2197644- >KJC3_011984-T1 ID=KJC3_011984-T1|Name=KJC3_011984-T1|organism=Aspergillus niger KJC3|type=CDS|length=801bp|location=Sequence derived from alignment at ch8:2196948..2197644- (Aspergillus niger KJC3)
AGAGGAGCTGAAGAAGGTCGGGGCGTCTAATCAATAGACTGGCCTCAGGA
GGAAACCGAACAAGGATCTGCTGCCAACGGCGCAAGCGCTCATTTGTGGG
AGGAGAGCTGGGATGATGACGATGCGGCCGAGGACTTCTCGAAGCAACTG
AAATGTCGAATCCCACCGCGACCCAGGACACCAAGGCCGAGCCTACCCAA
CAGCCACAGCAACAGAAGCCCCCCGTGCTGGAAGAAGATGACGAGTTTGA
GGACTTCCCCGTTGAAGAGAGGAGCTGAAGAAGGTCGGGGCGTCTAATCA
ATAGACTGGCCTCAGGAGGAAACCGAACAAGGATCTGCTGCCAACGGCGC
AAGCGCTCATTTGTGGGAGGAGAGCTGGGATGATGACGATGCGGCCGAGG
ACTTCTCGAAGCAACTGAAATGTCGAATCCCACCGCGACCCAGGACACCA
AGGCCGAGCCTACCCAACAGCCACAGCAACAGAAGCCCCCCGTGCTGGAA
GAAGATGACGAGTTTGAGGACTTCCCCGTTGAAGAGAGGAGCTGAAGAAG
GTCGGGGCGTCTAATCAATAGACTGGCCTCAGGAGGAAACCGAACAAGGA
TCTGCTGCCAACGGCGCAAGCGCTCATTTGTGGGAGGAGAGCTGGGATGA
TGACGATGCGGCCGAGGACTTCTCGAAGCAACTGAAATGTCGAATCCCAC
CGCGACCCAGGACACCAAGGCCGAGCCTACCCAACAGCCACAGCAACAGA
AGCCCCCCGTGCTGGAAGAAGATGACGAGTTTGAGGACTTCCCCGTTGAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0008541 | proteasome regulatory particle, lid subcomplex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006406 | mRNA export from nucleus |
| GO:0043248 | proteasome assembly |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011984-T1.utr5p1 | KJC3_011984-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.3 |
| DBxref | InterPro:IPR007834 |
| DBxref | PFAM:PF05160 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2196948..2197644 - |
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