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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2201500..2203926+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011986-T1 ID=KJC3_011986-T1|Name=KJC3_011986-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2427bp|location=Sequence derived from alignment at ch8:2201500..2203926+ (Aspergillus niger KJC3)
TTTGGATCTTCGCCTTCACTGCTGGATCACATTGCTCAGGTACCTGCTCA
AAAAACGTGCTGGTGGTTGAAATCATTTCAATACTCTCTGTCGCATGCTT
GGGGTTCGGCAATTATCTTATCCCACCGTTGCTTTCGGAGATTCGGAGAT
TTTTTTATCGGGGATATTTTTTCGATTCCGTCCCTCTGATATCATTTCCC
CCTCGTCTCATATGCATAGTGACTTAACGGGTTCTAATTGCCATTATCTA
ACTCGGAATTAATCAATTGAATATATCGTTTTTCAATATGTCGCGACGCG
AGCACTCACGCTCATCGCTCTCATCCGAAGATGTCGAGTCCTCCGAAGAC
CACAGCGCATACGTACACCAGGATGATCCGACTGCATTGGAGAAGCAGAC
TACCGCGGCGTCAGGCATGTCTGCCCTGGAAAATCGTGCGCATTCGGTGA
TCTCGCGCATTCGCAGTCGCGAACCGGGTCAAACTGCCCGCTTCACGCAT
CCGCTGTCGCATACTAGGACCTCCGAGGACGTCATTGTCGACTTTGATGG
GCCGGATGATCCGTACAGGCCGATGAATTGGAGTTTTCGCAAGAAGGCGA
TTACGACGGTTTTGTATGGGTTGACTACAATGGGTATGTGCGATTGCTGT
TATACTTTTTTCTTTAGGTGATGTACTGACGGTGGGTGCGTTCTATAGGT
GCGACTTGGGCTAGTTCGATGTATGCTTGCTGTTCCTCTATGCCGATACT
TGGACTGTATTCCAGTTACTGATAAAGCGCAGTTTCTCTACGGGCACCAA
GCAAATCGATGCGGAGTTCCACGTGGGTGAGGAGGTCGGCACATTGGGTA
CAACGCTGCTGTTGTTCGGTTTTGGTAGGTCTTGATACTATCGCTCGACC
TCTGCGCATAAGTTGACGTGATTAGGACTTGGCCCTCTCGTGTGGGCACC
GCTATCCGAGGTCTATGGACGTAAGCCTGCTGTGCTTGCGCCGTACTTCA
TCGCAGCCATCTTCTCGTTCGGTACCGCCACAGCCAAGGACCTCCAGACC
GTCATGCTGACTCGGTTCTTCTGCGGATTCTTTGGCTCCGCGCCCGTCAC
GAACACCGGTGGTGTCCTGAGCGACATCTGGACGGCAGAGCAGCGAGGTG
CCGCTATTGTTGGTTACGCCATGGCTGTGGTCGGAGGACCGGTGCTGGGT
CCGATTGTCGGAGGTGCCATCTGCCAGAGCTATCTCGGCTGGCGCTGGAC
CGAATACATTACCGGAATCATGATGATGTTCTTCCTCGCGATGGACCTCA
TCTTCCTCGACGAGAGCTACCCGGCTGTTCTCCTCGTTTACAAGGCTCAG
CGACTCCGCTTCGAAACAGGCAACTGGGCTCTCCACGCCCGTCATGAAGA
ATGGGACGTCACCTTCAAGGAACTCGGCAATAAGTATCTCATCCGACCCT
TCGCCCTCCTCACTACGCCCATCTGCTTCCTCGTCGCCATCTACGCCTCC
TTCGTCTACGGTATCCTATACCTCAGTTTGGCCTCCTTCCCCATCGAATT
CCAAGAAGTCCGCGGCTGGAACCAAGTCGTCGGCGCCCTGCCTTTCCTCG
CCTACCTCGTCGGTATCCTCTTCGGCGCCTGCATTAACCTCTTCAACCAG
AAATTCTACATCGCTCGCTTTAAAGCGAACAACAACTTCCCCGTCCCTGA
AGCCCGTCTGCCCCCAATGATGCTCGGCTCTATCGTTTTCGCCGCCGGTC
TCTTCATCTTCGCCTGGACAAGTGACCCCCACATCCATTGGATCGCTCCC
ATCATCGGCGCCGTCTGCATGGGTTTCGGCTTCTTCACCATCTTCCAAGC
TGCCCTGAACTACCTGATCGACACCTTCCAGAAAGTCTCCGCTAGTGCTG
TTGCGGCGAACACTTTCCTGAGAAGTCTGTTCGCGGGCTGCTTCCCTCTC
TTCGCTAATATCATGTTCCATCGTCTTGGTGTGGACTGGGCTGCGAGTGT
GCTAGGTTTTGTGGCTGTCGCATTGATCCCGATCCCTTACCTGTTCTATA
TCTTCGGAAAGCGCATCAGGGCGAAGGGAAAGTGGTCCCGGGCTTCGGTT
TACGGGTACTGATCCTACCTCTTACCTATCTTGGATGTTTTTGCTCAGAA
ACGTCGTCTCTCTTCCTATACCCATCGCGTTCACATATACCCCCACGTCC
ATTCTATGCCAGTCTTCCAAAGTTGAAATGAAGCGGGTAAGATTTATAAA
AGTTTTGTTCACTGGGATTTTGTGTCGGATTGCTCGAGATACCTCTGGTT
TTGTTTGGTTTGATTTGTTTTATATGGCATGACACGCATAGCACGGCCGG
GGTTTTGATAGACAGGAATAACGTATTATCACCGATTAATGTCTAGGTTT
AGTTAAATGGAATGATTTAGATATAGC back to topCoding sequence (CDS) from alignment at ch8:2201500..2203926+ >KJC3_011986-T1 ID=KJC3_011986-T1|Name=KJC3_011986-T1|organism=Aspergillus niger KJC3|type=CDS|length=6588bp|location=Sequence derived from alignment at ch8:2201500..2203926+ (Aspergillus niger KJC3)
ATGTCGCGACGCGAGCACTCACGCTCATCGCTCTCATCCGAAGATGTCGA
GTCCTCCGAAGACCACAGCGCATACGTACACCAGGATGATCCGACTGCAT
TGGAGAAGCAGACTACCGCGGCGTCAGGCATGTCTGCCCTGGAAAATCGT
GCGCATTCGGTGATCTCGCGCATTCGCAGTCGCGAACCGGGTCAAACTGC
CCGCTTCACGCATCCGCTGTCGCATACTAGGACCTCCGAGGACGTCATTG
TCGACTTTGATGGGCCGGATGATCCGTACAGGCCGATGAATTGGAGTTTT
CGCAAGAAGGCGATTACGACGGTTTTGTATGGGTTGACTACAATGGGTGC
GACTTGGGCTAGTTCGATTTTCTCTACGGGCACCAAGCAAATCGATGCGG
AGTTCCACGTGGGTGAGGAGGTCGGCACATTGGGTACAACGCTGCTGTTG
TTCGGTTTTGGACTTGGCCCTCTCGTGTGGGCACCGCTATCCGAGGTCTA
TGGACGTAAGCCTGCTGTGCTTGCGCCGTACTTCATCGCAGCCATCTTCT
CGTTCGGTACCGCCACAGCCAAGGACCTCCAGACCGTCATGCTGACTCGG
TTCTTCTGCGGATTCTTTGGCTCCGCGCCCGTCACGAACACCGGTGGTGT
CCTGAGCGACATCTGGACGGCAGAGCAGCGAGGTGCCGCTATTGTTGGTT
ACGCCATGGCTGTGGTCGGAGGACCGGTGCTGGGTCCGATTGTCGGAGGT
GCCATCTGCCAGAGCTATCTCGGCTGGCGCTGGACCGAATACATTACCGG
AATCATGATGATGTTCTTCCTCGCGATGGACCTCATCTTCCTCGACGAGA
GCTACCCGGCTGTTCTCCTCGTTTACAAGGCTCAGCGACTCCGCTTCGAA
ACAGGCAACTGGGCTCTCCACGCCCGTCATGAAGAATGGGACGTCACCTT
CAAGGAACTCGGCAATAAGTATCTCATCCGACCCTTCGCCCTCCTCACTA
CGCCCATCTGCTTCCTCGTCGCCATCTACGCCTCCTTCGTCTACGGTATC
CTATACCTCAGTTTGGCCTCCTTCCCCATCGAATTCCAAGAAGTCCGCGG
CTGGAACCAAGTCGTCGGCGCCCTGCCTTTCCTCGCCTACCTCGTCGGTA
TCCTCTTCGGCGCCTGCATTAACCTCTTCAACCAGAAATTCTACATCGCT
CGCTTTAAAGCGAACAACAACTTCCCCGTCCCTGAAGCCCGTCTGCCCCC
AATGATGCTCGGCTCTATCGTTTTCGCCGCCGGTCTCTTCATCTTCGCCT
GGACAAGTGACCCCCACATCCATTGGATCGCTCCCATCATCGGCGCCGTC
TGCATGGGTTTCGGCTTCTTCACCATCTTCCAAGCTGCCCTGAACTACCT
GATCGACACCTTCCAGAAAGTCTCCGCTAGTGCTGTTGCGGCGAACACTT
TCCTGAGAAGTCTGTTCGCGGGCTGCTTCCCTCTCTTCGCTAATATCATG
TTCCATCGTCTTGGTGTGGACTGGGCTGCGAGTGTGCTAGGTTTTGTGGC
TGTCGCATTGATCCCGATCCCTTACCTGTTCTATATCTTCGGAAAGCGCA
TCAGGGCGAAGGGAAAGTGGTCCCGGGCTTCGGTTTACGGGTACTGAATG
TCGCGACGCGAGCACTCACGCTCATCGCTCTCATCCGAAGATGTCGAGTC
CTCCGAAGACCACAGCGCATACGTACACCAGGATGATCCGACTGCATTGG
AGAAGCAGACTACCGCGGCGTCAGGCATGTCTGCCCTGGAAAATCGTGCG
CATTCGGTGATCTCGCGCATTCGCAGTCGCGAACCGGGTCAAACTGCCCG
CTTCACGCATCCGCTGTCGCATACTAGGACCTCCGAGGACGTCATTGTCG
ACTTTGATGGGCCGGATGATCCGTACAGGCCGATGAATTGGAGTTTTCGC
AAGAAGGCGATTACGACGGTTTTGTATGGGTTGACTACAATGGGTGCGAC
TTGGGCTAGTTCGATTTTCTCTACGGGCACCAAGCAAATCGATGCGGAGT
TCCACGTGGGTGAGGAGGTCGGCACATTGGGTACAACGCTGCTGTTGTTC
GGTTTTGGACTTGGCCCTCTCGTGTGGGCACCGCTATCCGAGGTCTATGG
ACGTAAGCCTGCTGTGCTTGCGCCGTACTTCATCGCAGCCATCTTCTCGT
TCGGTACCGCCACAGCCAAGGACCTCCAGACCGTCATGCTGACTCGGTTC
TTCTGCGGATTCTTTGGCTCCGCGCCCGTCACGAACACCGGTGGTGTCCT
GAGCGACATCTGGACGGCAGAGCAGCGAGGTGCCGCTATTGTTGGTTACG
CCATGGCTGTGGTCGGAGGACCGGTGCTGGGTCCGATTGTCGGAGGTGCC
ATCTGCCAGAGCTATCTCGGCTGGCGCTGGACCGAATACATTACCGGAAT
CATGATGATGTTCTTCCTCGCGATGGACCTCATCTTCCTCGACGAGAGCT
ACCCGGCTGTTCTCCTCGTTTACAAGGCTCAGCGACTCCGCTTCGAAACA
GGCAACTGGGCTCTCCACGCCCGTCATGAAGAATGGGACGTCACCTTCAA
GGAACTCGGCAATAAGTATCTCATCCGACCCTTCGCCCTCCTCACTACGC
CCATCTGCTTCCTCGTCGCCATCTACGCCTCCTTCGTCTACGGTATCCTA
TACCTCAGTTTGGCCTCCTTCCCCATCGAATTCCAAGAAGTCCGCGGCTG
GAACCAAGTCGTCGGCGCCCTGCCTTTCCTCGCCTACCTCGTCGGTATCC
TCTTCGGCGCCTGCATTAACCTCTTCAACCAGAAATTCTACATCGCTCGC
TTTAAAGCGAACAACAACTTCCCCGTCCCTGAAGCCCGTCTGCCCCCAAT
GATGCTCGGCTCTATCGTTTTCGCCGCCGGTCTCTTCATCTTCGCCTGGA
CAAGTGACCCCCACATCCATTGGATCGCTCCCATCATCGGCGCCGTCTGC
ATGGGTTTCGGCTTCTTCACCATCTTCCAAGCTGCCCTGAACTACCTGAT
CGACACCTTCCAGAAAGTCTCCGCTAGTGCTGTTGCGGCGAACACTTTCC
TGAGAAGTCTGTTCGCGGGCTGCTTCCCTCTCTTCGCTAATATCATGTTC
CATCGTCTTGGTGTGGACTGGGCTGCGAGTGTGCTAGGTTTTGTGGCTGT
CGCATTGATCCCGATCCCTTACCTGTTCTATATCTTCGGAAAGCGCATCA
GGGCGAAGGGAAAGTGGTCCCGGGCTTCGGTTTACGGGTACTGAATGTCG
CGACGCGAGCACTCACGCTCATCGCTCTCATCCGAAGATGTCGAGTCCTC
CGAAGACCACAGCGCATACGTACACCAGGATGATCCGACTGCATTGGAGA
AGCAGACTACCGCGGCGTCAGGCATGTCTGCCCTGGAAAATCGTGCGCAT
TCGGTGATCTCGCGCATTCGCAGTCGCGAACCGGGTCAAACTGCCCGCTT
CACGCATCCGCTGTCGCATACTAGGACCTCCGAGGACGTCATTGTCGACT
TTGATGGGCCGGATGATCCGTACAGGCCGATGAATTGGAGTTTTCGCAAG
AAGGCGATTACGACGGTTTTGTATGGGTTGACTACAATGGGTGCGACTTG
GGCTAGTTCGATTTTCTCTACGGGCACCAAGCAAATCGATGCGGAGTTCC
ACGTGGGTGAGGAGGTCGGCACATTGGGTACAACGCTGCTGTTGTTCGGT
TTTGGACTTGGCCCTCTCGTGTGGGCACCGCTATCCGAGGTCTATGGACG
TAAGCCTGCTGTGCTTGCGCCGTACTTCATCGCAGCCATCTTCTCGTTCG
GTACCGCCACAGCCAAGGACCTCCAGACCGTCATGCTGACTCGGTTCTTC
TGCGGATTCTTTGGCTCCGCGCCCGTCACGAACACCGGTGGTGTCCTGAG
CGACATCTGGACGGCAGAGCAGCGAGGTGCCGCTATTGTTGGTTACGCCA
TGGCTGTGGTCGGAGGACCGGTGCTGGGTCCGATTGTCGGAGGTGCCATC
TGCCAGAGCTATCTCGGCTGGCGCTGGACCGAATACATTACCGGAATCAT
GATGATGTTCTTCCTCGCGATGGACCTCATCTTCCTCGACGAGAGCTACC
CGGCTGTTCTCCTCGTTTACAAGGCTCAGCGACTCCGCTTCGAAACAGGC
AACTGGGCTCTCCACGCCCGTCATGAAGAATGGGACGTCACCTTCAAGGA
ACTCGGCAATAAGTATCTCATCCGACCCTTCGCCCTCCTCACTACGCCCA
TCTGCTTCCTCGTCGCCATCTACGCCTCCTTCGTCTACGGTATCCTATAC
CTCAGTTTGGCCTCCTTCCCCATCGAATTCCAAGAAGTCCGCGGCTGGAA
CCAAGTCGTCGGCGCCCTGCCTTTCCTCGCCTACCTCGTCGGTATCCTCT
TCGGCGCCTGCATTAACCTCTTCAACCAGAAATTCTACATCGCTCGCTTT
AAAGCGAACAACAACTTCCCCGTCCCTGAAGCCCGTCTGCCCCCAATGAT
GCTCGGCTCTATCGTTTTCGCCGCCGGTCTCTTCATCTTCGCCTGGACAA
GTGACCCCCACATCCATTGGATCGCTCCCATCATCGGCGCCGTCTGCATG
GGTTTCGGCTTCTTCACCATCTTCCAAGCTGCCCTGAACTACCTGATCGA
CACCTTCCAGAAAGTCTCCGCTAGTGCTGTTGCGGCGAACACTTTCCTGA
GAAGTCTGTTCGCGGGCTGCTTCCCTCTCTTCGCTAATATCATGTTCCAT
CGTCTTGGTGTGGACTGGGCTGCGAGTGTGCTAGGTTTTGTGGCTGTCGC
ATTGATCCCGATCCCTTACCTGTTCTATATCTTCGGAAAGCGCATCAGGG
CGAAGGGAAAGTGGTCCCGGGCTTCGGTTTACGGGTACTGAATGTCGCGA
CGCGAGCACTCACGCTCATCGCTCTCATCCGAAGATGTCGAGTCCTCCGA
AGACCACAGCGCATACGTACACCAGGATGATCCGACTGCATTGGAGAAGC
AGACTACCGCGGCGTCAGGCATGTCTGCCCTGGAAAATCGTGCGCATTCG
GTGATCTCGCGCATTCGCAGTCGCGAACCGGGTCAAACTGCCCGCTTCAC
GCATCCGCTGTCGCATACTAGGACCTCCGAGGACGTCATTGTCGACTTTG
ATGGGCCGGATGATCCGTACAGGCCGATGAATTGGAGTTTTCGCAAGAAG
GCGATTACGACGGTTTTGTATGGGTTGACTACAATGGGTGCGACTTGGGC
TAGTTCGATTTTCTCTACGGGCACCAAGCAAATCGATGCGGAGTTCCACG
TGGGTGAGGAGGTCGGCACATTGGGTACAACGCTGCTGTTGTTCGGTTTT
GGACTTGGCCCTCTCGTGTGGGCACCGCTATCCGAGGTCTATGGACGTAA
GCCTGCTGTGCTTGCGCCGTACTTCATCGCAGCCATCTTCTCGTTCGGTA
CCGCCACAGCCAAGGACCTCCAGACCGTCATGCTGACTCGGTTCTTCTGC
GGATTCTTTGGCTCCGCGCCCGTCACGAACACCGGTGGTGTCCTGAGCGA
CATCTGGACGGCAGAGCAGCGAGGTGCCGCTATTGTTGGTTACGCCATGG
CTGTGGTCGGAGGACCGGTGCTGGGTCCGATTGTCGGAGGTGCCATCTGC
CAGAGCTATCTCGGCTGGCGCTGGACCGAATACATTACCGGAATCATGAT
GATGTTCTTCCTCGCGATGGACCTCATCTTCCTCGACGAGAGCTACCCGG
CTGTTCTCCTCGTTTACAAGGCTCAGCGACTCCGCTTCGAAACAGGCAAC
TGGGCTCTCCACGCCCGTCATGAAGAATGGGACGTCACCTTCAAGGAACT
CGGCAATAAGTATCTCATCCGACCCTTCGCCCTCCTCACTACGCCCATCT
GCTTCCTCGTCGCCATCTACGCCTCCTTCGTCTACGGTATCCTATACCTC
AGTTTGGCCTCCTTCCCCATCGAATTCCAAGAAGTCCGCGGCTGGAACCA
AGTCGTCGGCGCCCTGCCTTTCCTCGCCTACCTCGTCGGTATCCTCTTCG
GCGCCTGCATTAACCTCTTCAACCAGAAATTCTACATCGCTCGCTTTAAA
GCGAACAACAACTTCCCCGTCCCTGAAGCCCGTCTGCCCCCAATGATGCT
CGGCTCTATCGTTTTCGCCGCCGGTCTCTTCATCTTCGCCTGGACAAGTG
ACCCCCACATCCATTGGATCGCTCCCATCATCGGCGCCGTCTGCATGGGT
TTCGGCTTCTTCACCATCTTCCAAGCTGCCCTGAACTACCTGATCGACAC
CTTCCAGAAAGTCTCCGCTAGTGCTGTTGCGGCGAACACTTTCCTGAGAA
GTCTGTTCGCGGGCTGCTTCCCTCTCTTCGCTAATATCATGTTCCATCGT
CTTGGTGTGGACTGGGCTGCGAGTGTGCTAGGTTTTGTGGCTGTCGCATT
GATCCCGATCCCTTACCTGTTCTATATCTTCGGAAAGCGCATCAGGGCGA
AGGGAAAGTGGTCCCGGGCTTCGGTTTACGGGTACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011986-T1.utr5p1 | KJC3_011986-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011986-T1.utr3p1 | KJC3_011986-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.3 |
| Note | SMCOG1106:major facilitator transporter |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2201500..2203926 + |
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