You are here

KJC3_011992-T1, KJC3_011992-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011992-T1
Unique NameKJC3_011992-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2245165..2245807-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011992-T1 ID=KJC3_011992-T1|Name=KJC3_011992-T1|organism=Aspergillus niger KJC3|type=mRNA|length=643bp|location=Sequence derived from alignment at ch8:2245165..2245807- (Aspergillus niger KJC3)
ATGCCTAAACTTTCGGCGCTGATCGTCTCGGTACTATCGATTTTCGTTTT GGTCGGACTGGTCTCTGCCACTGTCCTCCCCCGGAATATCAGATGCGAAA TTACCGCACCTTACTGTGAAGATAAAACCGGCCATTTGATTACTACTCTG CGCCGTGACGTTCATGGCGACTACGACGCCGATATTGAAGATCTGAGCGA TTCCGCTCAAGATGAATTAGCAGCCCCTCTTTGCAACGACAATTCTCAAT GCAACCTTGGCCAAATCTGCAACCAGGGTTTCTGTGTCGCAGGTTGTAAG TCCAATGTGGACTGTTCTCGCTTTCACACCTGTTCCAAAGGGTCGTGCAC AGATAGCCGTGGTAGCAGATGCGCCCCAAACAGGAGCAGATGTTCTCTCA GCGCCGAATGCTGCTCCGGACGATGCAAGCGCTGGGGCGGTTTCGTGGGA AGAAGAAGGTGCAGGGGCTTTAGAGATGTGTGAGGTTAATGGCCTGGCTG CTTCTATTGAAGCCTTATGTGGGCGGACTGGTGGCTTGAGGGAAACGAAG TATTGTCTACCAGTTGTGGCGCTGAATGAATTGCCTCTATTGGGCACAAA GGCAACCACTATCGCCTCACCTATTGCATGGATCATGTATTAG
back to top

Coding sequence (CDS) from alignment at ch8:2245165..2245807-

>KJC3_011992-T1 ID=KJC3_011992-T1|Name=KJC3_011992-T1|organism=Aspergillus niger KJC3|type=CDS|length=1140bp|location=Sequence derived from alignment at ch8:2245165..2245807- (Aspergillus niger KJC3)
ATGCGCCCCAAACAGGAGCAGATGTTCTCTCAGCGCCGAATGCTGCTCCG
GACGATGCAAGCGCTGGGGCGGTTTCGTGGGAAGAAGAAGGTGCAGGGGC
TTTAGAGATGTGTGAGGTTAATGGCCTGGCTGCTTCTATTGAAGCCTTAT
GTGGGCGGACTGGTGGCTTGAGGGAAACGAAGTATTGTCTACCAGTTGTG
GCGCTGAATGAATTGCCTCTATTGGGCACAAAGGCAACCACTATCGCCTC
ACCTATTGCATGGATCATGTATTAGATGCCTAAACTTTCGGCGCTGATCG
TCTCGGTACTATCGATTTTCGTTTTGGTCGGACTGGTCTCTGCCACTGTC
CTCCCCCGGAATATCAGATGCGAAATTACCGCACCTTACTGTGAAGATAA
AACCGGCCATTTGATTACTACTCTGCGCCGTGACGTTCATGGCGACTACG
ACGCCGATATTGAAGATCTGAGCGATTCCGCTCAAGATGAATTAGCAGCC
CCTCTTTGCAACGACAATTCTCAATGCAACCTTGGCCAAATCTGCAACCA
GGGTTTCTGTGTCGCAGGTTATGCGCCCCAAACAGGAGCAGATGTTCTCT
CAGCGCCGAATGCTGCTCCGGACGATGCAAGCGCTGGGGCGGTTTCGTGG
GAAGAAGAAGGTGCAGGGGCTTTAGAGATGTGTGAGGTTAATGGCCTGGC
TGCTTCTATTGAAGCCTTATGTGGGCGGACTGGTGGCTTGAGGGAAACGA
AGTATTGTCTACCAGTTGTGGCGCTGAATGAATTGCCTCTATTGGGCACA
AAGGCAACCACTATCGCCTCACCTATTGCATGGATCATGTATTAGATGCC
TAAACTTTCGGCGCTGATCGTCTCGGTACTATCGATTTTCGTTTTGGTCG
GACTGGTCTCTGCCACTGTCCTCCCCCGGAATATCAGATGCGAAATTACC
GCACCTTACTGTGAAGATAAAACCGGCCATTTGATTACTACTCTGCGCCG
TGACGTTCATGGCGACTACGACGCCGATATTGAAGATCTGAGCGATTCCG
CTCAAGATGAATTAGCAGCCCCTCTTTGCAACGACAATTCTCAATGCAAC
CTTGGCCAAATCTGCAACCAGGGTTTCTGTGTCGCAGGTT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011992KJC3_011992Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011992-T1KJC3_011992-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011992-T1.cdsKJC3_011992-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011992-T1.exon2KJC3_011992-T1.exon2Aspergillus niger KJC3exon
KJC3_011992-T1.exon1KJC3_011992-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-23)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2245165..2245807 -