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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2268026..2269322+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012001-T1 ID=KJC3_012001-T1|Name=KJC3_012001-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1297bp|location=Sequence derived from alignment at ch8:2268026..2269322+ (Aspergillus niger KJC3)
GCCGACATCTCAACCAACCAACCCACCCACCTCATTTACTTCCCCACCGA
TACCTCCAACAATGTGGAAGCGCACGGGGCTTCTAGCCTCATTAACTGAG
CCGACGCTCCTCCAGAACACTCGTTGCCTAAGTTGCCAATTGCGCAATGC
GGCCGCACTCCGGCCCCGAACCGCTGCGCTGCGTTACTACGCCAGCAAAC
CCGACACCAGCAGCGAAACCAAGCCAAAAACACCCTCCCCCATCGCATCT
CTCGCAAGCAAGACCAACAGAGTAGCCCAATTTCAAGCAAACTACTCCGC
GACAGCATCCAAGGTCCCCTCCCCGACTAGCCAACCCGGCGATGACGACT
TCATACCTCCGACGCTAGACCGACCTATCGGATCGGTAATCCCACCCAAG
GAAGGACAGAACACGGGTGTCGATGACCGCTCTATACGACAGAGGAGAGA
TGATTTCGTGAACTACGAGAGACATCTTGAGCGGCGGAAGGAATTGTACG
ACCCCATTTATTTCCTAAGCCTATACTCCTTATACAATTTCTAATCAAGT
CTCGATGATAAACTATAGAACCCGACAAGTCGCAAAGCCCTACTTCCGCG
AATGGTCCAACATGCGCTACCACGAAGGCAAAACCTTCATGTCGAACCCC
CGCCTCTTCAAGCGCGACAAGGCCCTCTACTTCCCCAACATGCACGGCAT
CACTCTCGCCTCGCCGAAAGAACCCCAGAACACGACGACTCTTTTCCGCG
GCAAGATTACAATCGTGAACCTCTTCTCGAGCGTGTGGGCCGAGTCGCAG
GTCGTTACCTTCACAGGCAAGGAGCAGAACCCCGGTCTGTGGGAGACGAT
TGCCGCGGAGGGAGACGGCATGGTGCAGAAGGTTGATATCAACTTGGAGG
AGAATGCGTTGAAGGCCGGCCTGGTTAAGATGTTCATGTGGCGTATGCGG
GCAAAGTTGCCGCAGGAGCAGCATGAACGGTACTTCCTGGTGCGGAAGGG
ATTGGATGATGGATTGAAGGAGAGTATTGGGATGTTGAACTCGAAGGTGG
GGTATGTGTATTTGTTGGACGAGAACTGTCGCATTCGGTGGGCGGGCAGT
GGGCCTGCTGAGAAGGAGGAGTTGGAGGCACTGAATAATGGGGTGCGCAA
GTTGGTGCAGGAGAAGAAGGTCAGTTTGCAGTCGGAGATGCCGGCGCAGG
AGTGGGATGCTGCGAGGGGTCAGGGTGAAGCTGTGAAGAAGCCTCGTGTT
GTTATGCCCTAGATGGGTTTGGTGTGCCATGGCTGGACAGGTACGGG back to topCoding sequence (CDS) from alignment at ch8:2268026..2269322+ >KJC3_012001-T1 ID=KJC3_012001-T1|Name=KJC3_012001-T1|organism=Aspergillus niger KJC3|type=CDS|length=2256bp|location=Sequence derived from alignment at ch8:2268026..2269322+ (Aspergillus niger KJC3)
ATGTGGAAGCGCACGGGGCTTCTAGCCTCATTAACTGAGCCGACGCTCCT
CCAGAACACTCGTTGCCTAAGTTGCCAATTGCGCAATGCGGCCGCACTCC
GGCCCCGAACCGCTGCGCTGCGTTACTACGCCAGCAAACCCGACACCAGC
AGCGAAACCAAGCCAAAAACACCCTCCCCCATCGCATCTCTCGCAAGCAA
GACCAACAGAGTAGCCCAATTTCAAGCAAACTACTCCGCGACAGCATCCA
AGGTCCCCTCCCCGACTAGCCAACCCGGCGATGACGACTTCATACCTCCG
ACGCTAGACCGACCTATCGGATCGGTAATCCCACCCAAGGAAGGACAGAA
CACGGGTGTCGATGACCGCTCTATACGACAGAGGAGAGATGATTTCGTGA
ACTACGAGAGACATCTTGAGCGGCGGAAGGAATTAACCCGACAAGTCGCA
AAGCCCTACTTCCGCGAATGGTCCAACATGCGCTACCACGAAGGCAAAAC
CTTCATGTCGAACCCCCGCCTCTTCAAGCGCGACAAGGCCCTCTACTTCC
CCAACATGCACGGCATCACTCTCGCCTCGCCGAAAGAACCCCAGAACACG
ACGACTCTTTTCCGCGGCAAGATTACAATCGTGAACCTCTTCTCGAGCGT
GTGGGCCGAGTCGCAGGTCGTTACCTTCACAGGCAAGGAGCAGAACCCCG
GTCTGTGGGAGACGATTGCCGCGGAGGGAGACGGCATGGTGCAGAAGGTT
GATATCAACTTGGAGGAGAATGCGTTGAAGGCCGGCCTGGTTAAGATGTT
CATGTGGCGTATGCGGGCAAAGTTGCCGCAGGAGCAGCATGAACGGTACT
TCCTGGTGCGGAAGGGATTGGATGATGGATTGAAGGAGAGTATTGGGATG
TTGAACTCGAAGGTGGGGTATGTGTATTTGTTGGACGAGAACTGTCGCAT
TCGGTGGGCGGGCAGTGGGCCTGCTGAGAAGGAGGAGTTGGAGGCACTGA
ATAATGGGGTGCGCAAGTTGGTGCAGGAGAAGAAGGTCAGTTTGCAGTCG
GAGATGCCGGCGCAGGAGTGGGATGCTGCGAGGGGTCAGGGTGAAGCTGT
GAAGAAGCCTCGTGTTGTTATGCCCTAGATGTGGAAGCGCACGGGGCTTC
TAGCCTCATTAACTGAGCCGACGCTCCTCCAGAACACTCGTTGCCTAAGT
TGCCAATTGCGCAATGCGGCCGCACTCCGGCCCCGAACCGCTGCGCTGCG
TTACTACGCCAGCAAACCCGACACCAGCAGCGAAACCAAGCCAAAAACAC
CCTCCCCCATCGCATCTCTCGCAAGCAAGACCAACAGAGTAGCCCAATTT
CAAGCAAACTACTCCGCGACAGCATCCAAGGTCCCCTCCCCGACTAGCCA
ACCCGGCGATGACGACTTCATACCTCCGACGCTAGACCGACCTATCGGAT
CGGTAATCCCACCCAAGGAAGGACAGAACACGGGTGTCGATGACCGCTCT
ATACGACAGAGGAGAGATGATTTCGTGAACTACGAGAGACATCTTGAGCG
GCGGAAGGAATTAACCCGACAAGTCGCAAAGCCCTACTTCCGCGAATGGT
CCAACATGCGCTACCACGAAGGCAAAACCTTCATGTCGAACCCCCGCCTC
TTCAAGCGCGACAAGGCCCTCTACTTCCCCAACATGCACGGCATCACTCT
CGCCTCGCCGAAAGAACCCCAGAACACGACGACTCTTTTCCGCGGCAAGA
TTACAATCGTGAACCTCTTCTCGAGCGTGTGGGCCGAGTCGCAGGTCGTT
ACCTTCACAGGCAAGGAGCAGAACCCCGGTCTGTGGGAGACGATTGCCGC
GGAGGGAGACGGCATGGTGCAGAAGGTTGATATCAACTTGGAGGAGAATG
CGTTGAAGGCCGGCCTGGTTAAGATGTTCATGTGGCGTATGCGGGCAAAG
TTGCCGCAGGAGCAGCATGAACGGTACTTCCTGGTGCGGAAGGGATTGGA
TGATGGATTGAAGGAGAGTATTGGGATGTTGAACTCGAAGGTGGGGTATG
TGTATTTGTTGGACGAGAACTGTCGCATTCGGTGGGCGGGCAGTGGGCCT
GCTGAGAAGGAGGAGTTGGAGGCACTGAATAATGGGGTGCGCAAGTTGGT
GCAGGAGAAGAAGGTCAGTTTGCAGTCGGAGATGCCGGCGCAGGAGTGGG
ATGCTGCGAGGGGTCAGGGTGAAGCTGTGAAGAAGCCTCGTGTTGTTATG
CCCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012001-T1.utr5p1 | KJC3_012001-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012001-T1.utr3p1 | KJC3_012001-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263UN3 |
| DBxref | InterPro:IPR007849 |
| DBxref | PFAM:PF05176 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2268026..2269322 + |
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