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KJC3_012003-T1, KJC3_012003-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012003-T1
Unique NameKJC3_012003-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2270809..2272228+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012003-T1 ID=KJC3_012003-T1|Name=KJC3_012003-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1420bp|location=Sequence derived from alignment at ch8:2270809..2272228+ (Aspergillus niger KJC3)
CACCAGCCACAATCACGTGCCCGCTTAAGCCGCCGCACACCCAGAAAAAA
TCAAACCCTAGTCCCACAACGAACATCCCAAATTGACCCGGTCCATCTTC
AATCCTCACGTCGACAACCCGTACGATACGACACGAAGCCGCCCACCATG
GTATGTTGAATGCGCCATGCTGCTATTCGCAGTTTTTGATTCTGCGTGAA
AAAAGTGAAATGCTGACGGGAGTTTTTCTATTTGAAGTCGTCCAAGGTCA
AGGCTGGTCAGCTCTGGGGAAAGAGCAAGGATGACCTCACCAAGCAGCTG
GAGGAATTGAAGACCGAGCTGAGCCAGCTCCGTGTCCAGAAGATCGCTGG
CGGTGCCTCCTCGAAGACCCACAGAATGTGCGTTTGAAAAGAATTCATCT
GATTTTCTCCTGCGAACCCCTCATGTGTGTGCGTTGTGTGTGGTGTGTGA
AGGATATGAGATTTGCACCTGTCGGATTGTGGATTACGGCGGGAGGAAGG
AAACGACAACGACATTCGACAATTGGAAAAATGAGACGACGCATACCAGT
CAAGAACAGAAATCCCGACAACCCATGAAATCGACCTACAATAAGGAAAC
GAGGGGTACACGACCGAACGACAACAAGATCCAAGCCGAGAAGAAACTTT
CCGACAGGGCGCAAAATCCAACATATCTACCACCTACATGAAAAAAATGG
GCACACATGCGCAGTGAACCAGGAACAAGAACAGGGATGCTGATATACCG
TCTTTTAACAGCCACGACGTTCGCAAGTCGATCGCTCGCGTTCTGACCGT
CATCAACGCCAACCAGCGCGCTCAGCTCCGCTTGTTCTACAAGAGCAAGA
AGTACACTCCTCTTGACCTCCGCCCCAAGCTCACCCGTGCTCTCCGCCGC
CGTCTCACCAAGCACGAGGCTACCCTGAAGACCGAGCGCAAGCGCAAGCA
GGAGATCCACTTCCCCCAGCGGAAGTACGCTGTTAAGGTACGACCTGCCC
AACATACCTGAATATATGACCCCGCGGGGGAAAATATGAAGGACATTGGC
TAACTGGGATTGCAACAGGCTTAAATGTTTAAGACGGGGTCGTCTCTGGA
TCTGGATGGAGTTAACGGGAACGTCGTTTAATGATGACGGGTTGACCTAA
CCTTGCCGTGAGGGGGGTCGGATTCATCAAAACGGTTTCTTTTGAAAAAA
GAAATCGATTATGTATCTTAGAAAAAAGAAGATGCAGATCGATGTTTTTA
AATGAAGGCCTTGCTTGACATGACATGAGATAAAGATTCTTATTATTGGT
ATTGTGGTAGTTGCGGAGTACAGTGATATCTAGTCTCCCTGGGTAGTGCC
CTTTTTCTTTTTTCCTTTTTTTTTGCTCTCGAGTAGTATAGTCTATCTTG
TACGACTGTCCATATGCAAC
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Coding sequence (CDS) from alignment at ch8:2270809..2272228+

>KJC3_012003-T1 ID=KJC3_012003-T1|Name=KJC3_012003-T1|organism=Aspergillus niger KJC3|type=CDS|length=1500bp|location=Sequence derived from alignment at ch8:2270809..2272228+ (Aspergillus niger KJC3)
ATGTCGTCCAAGGTCAAGGCTGGTCAGCTCTGGGGAAAGAGCAAGGATGA
CCTCACCAAGCAGCTGGAGGAATTGAAGACCGAGCTGAGCCAGCTCCGTG
TCCAGAAGATCGCTGGCGGTGCCTCCTCGAAGACCCACAGAATCCACGAC
GTTCGCAAGTCGATCGCTCGCGTTCTGACCGTCATCAACGCCAACCAGCG
CGCTCAGCTCCGCTTGTTCTACAAGAGCAAGAAGTACACTCCTCTTGACC
TCCGCCCCAAGCTCACCCGTGCTCTCCGCCGCCGTCTCACCAAGCACGAG
GCTACCCTGAAGACCGAGCGCAAGCGCAAGCAGGAGATCCACTTCCCCCA
GCGGAAGTACGCTGTTAAGGCTTAAATGTCGTCCAAGGTCAAGGCTGGTC
AGCTCTGGGGAAAGAGCAAGGATGACCTCACCAAGCAGCTGGAGGAATTG
AAGACCGAGCTGAGCCAGCTCCGTGTCCAGAAGATCGCTGGCGGTGCCTC
CTCGAAGACCCACAGAATCCACGACGTTCGCAAGTCGATCGCTCGCGTTC
TGACCGTCATCAACGCCAACCAGCGCGCTCAGCTCCGCTTGTTCTACAAG
AGCAAGAAGTACACTCCTCTTGACCTCCGCCCCAAGCTCACCCGTGCTCT
CCGCCGCCGTCTCACCAAGCACGAGGCTACCCTGAAGACCGAGCGCAAGC
GCAAGCAGGAGATCCACTTCCCCCAGCGGAAGTACGCTGTTAAGGCTTAA
ATGTCGTCCAAGGTCAAGGCTGGTCAGCTCTGGGGAAAGAGCAAGGATGA
CCTCACCAAGCAGCTGGAGGAATTGAAGACCGAGCTGAGCCAGCTCCGTG
TCCAGAAGATCGCTGGCGGTGCCTCCTCGAAGACCCACAGAATCCACGAC
GTTCGCAAGTCGATCGCTCGCGTTCTGACCGTCATCAACGCCAACCAGCG
CGCTCAGCTCCGCTTGTTCTACAAGAGCAAGAAGTACACTCCTCTTGACC
TCCGCCCCAAGCTCACCCGTGCTCTCCGCCGCCGTCTCACCAAGCACGAG
GCTACCCTGAAGACCGAGCGCAAGCGCAAGCAGGAGATCCACTTCCCCCA
GCGGAAGTACGCTGTTAAGGCTTAAATGTCGTCCAAGGTCAAGGCTGGTC
AGCTCTGGGGAAAGAGCAAGGATGACCTCACCAAGCAGCTGGAGGAATTG
AAGACCGAGCTGAGCCAGCTCCGTGTCCAGAAGATCGCTGGCGGTGCCTC
CTCGAAGACCCACAGAATCCACGACGTTCGCAAGTCGATCGCTCGCGTTC
TGACCGTCATCAACGCCAACCAGCGCGCTCAGCTCCGCTTGTTCTACAAG
AGCAAGAAGTACACTCCTCTTGACCTCCGCCCCAAGCTCACCCGTGCTCT
CCGCCGCCGTCTCACCAAGCACGAGGCTACCCTGAAGACCGAGCGCAAGC
GCAAGCAGGAGATCCACTTCCCCCAGCGGAAGTACGCTGTTAAGGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL35KJC3_012003Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012003-T1KJC3_012003-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012003-T1.utr5p1KJC3_012003-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012003-T1.exon1KJC3_012003-T1.exon1Aspergillus niger KJC3exon
KJC3_012003-T1.exon2KJC3_012003-T1.exon2Aspergillus niger KJC3exon
KJC3_012003-T1.exon3KJC3_012003-T1.exon3Aspergillus niger KJC3exon
KJC3_012003-T1.exon4KJC3_012003-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012003-T1.cdsKJC3_012003-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012003-T1.utr3p1KJC3_012003-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265FTY
DBxrefInterPro:IPR001854
DBxrefInterPro:IPR036049
DBxrefPFAM:PF00831
Product60S ribosomal protein L35
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2270809..2272228 +
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