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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2299702..2305212- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012011-T1 ID=KJC3_012011-T1|Name=KJC3_012011-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5511bp|location=Sequence derived from alignment at ch8:2299702..2305212- (Aspergillus niger KJC3)
GTCACTGCTTTCTAATTTTCCTGGTGCGCCTCTCTCTCTTCCCCCTCCCC
CCCCTCCATTTCCCCTTGCCAGTCGTGTCTCCAACTTTCTTCCCCACCCC
ACTGCTCTGCCCTGCCCTGTCCGTTGTGGTTCTAACCCAATCGACAACTG
CGACCCGGTCTGGCACACGCACGCACACCCCCCCTCCCCTCCTCTCACAT
TCACTCACATACTACTCACATACACACACACCTCATTACCCACGCACACA
CCACAGACTCACAGGCGGCCGGTCACACATAGCTTAACTCCCCCCGTCAA
CGGTCCCCACTGATCGGTTCCATCGGCGGCACGCTGTGAATCATCCACTG
CCCATCTCCCTGTCTCCGGCATAGTAACCGCCCGCTGCTAGTTCTCCTTA
GTGGGTGACGCTGCTTTTCTGCAGACAGGGAACCTTGGGATACCCGATCG
ATTGTGGAGGGGACCAGAAAGGAGGAGGAGGAGCAGTTCACAGCCTCATG
TGGCGGCGTCGGTGGCCTTCCCTCACCAGCCACATTCACTCTTATCCATA
CAATTCCCCCATAACATTGTGCTTCCTCTGCAGCTTATCGGCTTGTACCT
TGTTCGGCTTTGTGCCTGGTCTCACCGATTTGTTCTAAAGTGGTGACTGT
GTTTGTTCACTTTTGTCGCTTCCCTGCTCTGGATTCGTCTAGATTTGTTC
TTTTCCGACCGTGCGCTGCCTGTCTGTCTGCTGGTCATTCATTCATCCAT
CTCCCATCAATTTCCATTATCCCCTCTCACCGCCTTCGTGATCTGAACTT
CGCTTCCCCCCAAACCATCACCACCCCAGTCTGCAAAGCACCGATTTGCT
CAAACCTTTCCGCTGATCCGCTTCCTGCCACCTACCAGTCAAATTCCCAC
TGCATGCGAGCCGTGGTCCGTCCACCTTCATCTGTCCGAGGATCACTTGC
ATCGTCGCAGTTTCGCCCTCCATCATCGCAATAGCCAACCAGGTCGCCAT
CTTCTTCCTTCCCCCCTCCCGTTTTGGCATCCTGATCTTCTTCGCGTTTC
TCTAACGCGCCCGCAACCTTGCGACGGTGCCCTCCACCATCACCACCACC
CACCACACCACACCACCACCTTTCCCGTCCTTCCTTGGCCCGCCATGTAC
AGCACTCCTCAATCTTCTGTTCCCGCTCCGATGAATGGCATCGGAGGGGA
GCTCGTTGATGGGTCGGGGACAATCAATCCCGCTGCCCTGAACAATGGTA
TGTGACTGATTTGCTTTCCCTCCTTCCCTTCGTCGCTTCGTCTGTTCGCC
TGTTTGTGTCCCCGCTTGCTTGCTTTGTGTTCAGTTCCTTTCCACTATCC
CCCCTCCCCCTTGTTTCGTTTCTTTCATTCTTTTTCTTTTTCCCTTTCCC
ACATCAGTTTTCCCTATTCGCCGCCGCGCTTTTAACGGTGGACCTTGTCT
GTCGCCGCTCATGGAGGCTCAAAAAATATCTTTCTATCTCTCTTGCTTGT
CCATCGTGACAGCCTCCAAACTGACGGCCTTCTACTAGTCGCCGTAGTGC
TTCCTACCCCAACAACACATGGTGGCATTGCGACCCCAACGAGTATAGCT
CCTCGTGGTGTGAAGCGAAGTCGAACCCCAGACCAGCGCGGGAATGCACG
CGCGGATGGAGACCATGACGACGGTATGTGTGCGTCGGAGTCCTCTTACG
ATTCGCTTCGTGGAATTCCGGAAGCGTGGGAGTTTCTTGGCATTCGCGTT
CCCTCGCACGTTGTTGTTGTTGCTATCTAAATGTCGCGCTTTTGCTTTTT
GCTACCCTTCCGTCCACGTGCATGTATAACATTGCCTGGCGATCAAGATG
GCTGACGCGTGGACCACTTCGGTCAAAGCAACAGATGAACAGGGCCGTCG
GAAACGAGGCCGTCCCCCAAAGACTCCGCGTCCGTCTGCGACAACCCCCA
GCGATCAGACTTCCAATGTTCACCTCCAGACGCCCCGGTTGCAGACCCAG
CCTCTGCCGGCGCAAGCTGCCGTCAATGTATCACCTCCGCAGGCTTCTCC
CCCGGATAAAACGACGCCGACCAAGTCTACGCTCGTCAAGGCCCTACCCA
CCGTTAGGGATCATACGACAGACCAGCTTAATGAAGAAGGCGACGAATAC
ATCCCCAAGGAATTCGATGACGCTGGTGAAAAGAAGGTTGATGCCATGGG
CTACCCTCAAGGAGGCCGAGAGTACAAGTGTCGCACGTTCCGCGTTCCTC
TGCGTGGGAATAAGCTTTTCATGCTTGCGACCGAATGCGCAAGGGTGCTG
GGCTATCGCGACTCGTATCTCTTGTTCAACAAGAACCGGTCGCTGCACAA
GATCATCGCGAGTCAGATCGAGAAGGATGATCTCATTCAGCAGGACATCC
TGCCCTACTCGTATCGTTCGCGCCAGATTGCTATCGTGACGGCCAAGTCG
ATGTTCCGTCAGTTCGGCAGCCGCGTGATTGTCAATGGGCGACGCGTCCG
CGACGACTACTGGGAGAGCAAAGCACGGAAACAAGGATTCACCGAGGATG
ATTTGGCTGGTGAGAAACGACCCGGCGGCGCGAAAGCCCGGGATGCGGCG
GCAGCAGAAGCGGCGGGCGCAGCGAACTTTCTACCCACCCTAACCCATGG
CGATGTCATCTACAGCAATGCGCTGGAATCGGTGCCTGGTAGCTTGCCTG
TCGGCCCCCCATCCTCGGTTTCCCTTGCGCCACCGCTCCCTATGATCCAT
ATGGCCACCACCACCGATGATCCCCGGCTGCGGGAGTATAACAGTATGCC
TCGCCCGCGTCAGGAATTGACCGGCCAGCCTTTCCAGGATCGCATTCAGC
CCAGCTCGGCCGCTGAAATACTTAACCAGGCTTCACACACGGCCGAGTTC
AACAAGATTCTAACGTCACAACGGAGTTATCGCCAGAAGGGCCTGGACGA
CTTTTACGCAAAGCAACGGGAGGTACCCGTTTCTGCAGCACAGTCACAGC
CTGGCCAATTGGATTCGACACCATCCGTGTCACAGCCCTTGCAGTCCCCA
CAGATGGCCTCCACGGGAATGATGAACGCGGCTCAGTCGCAGCAGCCCAT
GCTTTCCCATCAGGCACCGATTATGTCTGGCCAGGCCGGTTTTCAGCCAC
CAGCGGCTCATCAGCAGCCGCCTGTTGCACAGTCCCCTGTTCGGGGCGTA
CCCCCGGTCCGGCCCGAGTTGATGCACCAAAGATCTAACCCTGCCATGGC
TGCCGGGACGCCTCAGCCCCCTGGCCCTTATGGATATCCCTCCCAAGCGC
AGCAGATGTGGGGTCAACCACCACCTCAGCCGCAACCATCTCCGCTCTCT
GCCGCTGGACCTCAGGGCGTCGGCATGCCCCAGTTCCCGTCGCAGTTACA
TACGCAACAATCACCCTCGCCACTCGCACACTCCATGCCGCAGCAGCAAC
AGCAGCAGCAGCAGCATTCGCAATCTCCTCGGAATCACCCCCGACCTTCG
GCGCCGCCGATGCCTCAGACTTTCCCCATGCATCCTCAGCAGGCGCCTCA
ACAGCAGCCCATGGCATCCATGGGATTCCCTGGTGTCACGGCTGCGCCGT
ACCCAGCAGTGACTGCCGCCAGAGGCATGTATCCTTCGACGCAGGGTCCG
GGTGGTCAACAGTTTATGGCGGGCACTCCCCAGCAGCCTGGTTTGGCCAT
GGGAATGAGCGCCGGCGGTGCTATGCCGGGATGGCCTCCGGCTGGCCCCA
TGCAGCCCGGTCATCCGCAACCAGGCCAGTCCGGCACTCCTCTGGGATGG
TCCGGTTACTAGAATGAAGCAAAGTGAGATGGCGATGGCCGGCATAATCC
AAATTCGGCGTTTGCGGGGATCTGGTGATGTTGATCTACGGAAAAGAGAC
ACGCCCGTTTTGACTTGTTATCTTCATTTCATCTTTCTTATACCGTGGAT
CCTGGATCCATTTGCTTTGAGAACGGTTACCTCGCATCTTCCCGTCATAC
CCTTTTCATTGATGCTGTATATTATCCTTGTCTCAAGGATGATGGCTAAT
GATAATCTGCACGCGTTTTCTTCTTATACCCTCTGTTATACCCGGTCAGT
TATGTATGTGTTGTCGTTGATGTTTTCCGCCCTTGACTTGTTGTTTCGTC
GGGAGGCTTTGAAGAATGTTGTTCGATGTGCAGTTACGAGTGTTGTTGCG
ATTGTGCATTTTTCATATGTCCATGATAGAGGGACGGTCAGATGGTATGG
CGGTGAATGTTTCGTTTTGTTTGGGTCGGCGTATTACAACAGCCCATGTT
TGCAGTTATCATTCTTCCGTGTCTTCTATTTTCAACGTCCTTGAGCATCG
GGAATCTTTCTATTTGCACTTCCCTACTTTCTGCGACACCCCACTGCTGT
TACATTTTGGGTACTCTTCACTATTACTCCTGGCTTCTACATTTCATTTT
CTACACATGGAACCACACCCCTCTTGTCCAGTTGCTGCTATCGTGATACT
CTCGATGCTGTCTTTATGCTCTTTATATGCAGATCAAACACGGTTGCACA
CTGGGGGCTCCTAATTTGACCAAACCCTCAACAACCACAATTCCTCCCTT
TTGCCTTTGTAGTTGAACCGTATAAGCTTCAATTTTTTTCAGTGATGGCT
CCTACTATATACACCTGATTGTAAAATACAAACCAGTCCAGTCATAAGAA
TGAGTGACTCTATATACACATTGTTCAATTCAGTGATTACAATCCCCCCC
TATACCACCCCATCCCCTACCACCAAATAACACTAATAAGCAACCGTCAC
CAACGGCGTTGTCACCGGCGCTGCCGAAGACGCACACACGCACCCCGAAC
TAACAGAAGTAACCGGCGGCGCCGTACAATGCGCACTCGTCGTCCAAGAA
ACCGTCCCCGTAACCGTTGGCTCAACCTCACTATCCCCCACAATCTCCCC
CTTCACCAGCACAGGAATCACCGCACCGGTCCTGAGCCCAAAAACCCTAT
GTCCAACGACCCTCAACAAACTCGCTATCTCCCCGGAATGACTCGTCACA
CTCACAAACACCCCATTCTTCTCCTCCCCACCAAACACATCATCCAACGC
CCTCCGACTCCTCACATCCTGCGCCGCGCTCGTCTCCCCAGTCACTCCAT
TCCATAACTCATCGTCTTCAGCGAACCCCTTCTCGAAGGGCCATGTAGGG
AACACGGAATGGATGTGACTTGCGTTGTGACGATGATCGCACGTATGAAT
GGATATACTCTCCCGGAAGAATTCCTTTATTTCTGGGATGAATGGAGTTC
CCAAGGATAGGTCCGAGAATGTGATATTCGCTGTGCGGAGCGCCCGAAGC
AGTGGGCTAACGAAGTAACTATCCGGTGTGTGGATGCGCTGCGCGCTTAT
CTGGATGTTCCAGAAATCGTGCGCGATTTGCGCTTGTTGGATCCCTGTCG
GGGTGAGGTCTGCGTCCAGCCAGGTGGTGGTTCCGTTGCCGGTTAGGAGG
GACCAGTAGCA back to topCoding sequence (CDS) from alignment at ch8:2299702..2305212- >KJC3_012011-T1 ID=KJC3_012011-T1|Name=KJC3_012011-T1|organism=Aspergillus niger KJC3|type=CDS|length=4062bp|location=Sequence derived from alignment at ch8:2299702..2305212- (Aspergillus niger KJC3)
ATGAACAGGGCCGTCGGAAACGAGGCCGTCCCCCAAAGACTCCGCGTCCG
TCTGCGACAACCCCCAGCGATCAGACTTCCAATGTTCACCTCCAGACGCC
CCGGTTGCAGACCCAGCCTCTGCCGGCGCAAGCTGCCGTCAATGTATCAC
CTCCGCAGGCTTCTCCCCCGGATAAAACGACGCCGACCAAGTCTACGCTC
GTCAAGGCCCTACCCACCGTTAGGGATCATACGACAGACCAGCTTAATGA
AGAAGGCGACGAATACATCCCCAAGGAATTCGATGACGCTGGTGAAAAGA
AGGTTGATGCCATGGGCTACCCTCAAGGAGGCCGAGAGTACAAGTGTCGC
ACGTTCCGCGTTCCTCTGCGTGGGAATAAGCTTTTCATGCTTGCGACCGA
ATGCGCAAGGGTGCTGGGCTATCGCGACTCGTATCTCTTGTTCAACAAGA
ACCGGTCGCTGCACAAGATCATCGCGAGTCAGATCGAGAAGGATGATCTC
ATTCAGCAGGACATCCTGCCCTACTCGTATCGTTCGCGCCAGATTGCTAT
CGTGACGGCCAAGTCGATGTTCCGTCAGTTCGGCAGCCGCGTGATTGTCA
ATGGGCGACGCGTCCGCGACGACTACTGGGAGAGCAAAGCACGGAAACAA
GGATTCACCGAGGATGATTTGGCTGGTGAGAAACGACCCGGCGGCGCGAA
AGCCCGGGATGCGGCGGCAGCAGAAGCGGCGGGCGCAGCGAACTTTCTAC
CCACCCTAACCCATGGCGATGTCATCTACAGCAATGCGCTGGAATCGGTG
CCTGGTAGCTTGCCTGTCGGCCCCCCATCCTCGGTTTCCCTTGCGCCACC
GCTCCCTATGATCCATATGGCCACCACCACCGATGATCCCCGGCTGCGGG
AGTATAACAGTATGCCTCGCCCGCGTCAGGAATTGACCGGCCAGCCTTTC
CAGGATCGCATTCAGCCCAGCTCGGCCGCTGAAATACTTAACCAGGCTTC
ACACACGGCCGAGTTCAACAAGATTCTAACGTCACAACGGAGTTATCGCC
AGAAGGGCCTGGACGACTTTTACGCAAAGCAACGGGAGGTACCCGTTTCT
GCAGCACAGTCACAGCCTGGCCAATTGGATTCGACACCATCCGTGTCACA
GCCCTTGCAGTCCCCACAGATGGCCTCCACGGGAATGATGAACGCGGCTC
AGTCGCAGCAGCCCATGCTTTCCCATCAGGCACCGATTATGTCTGGCCAG
GCCGGTTTTCAGCCACCAGCGGCTCATCAGCAGCCGCCTGTTGCACAGTC
CCCTGTTCGGGGCGTACCCCCGGTCCGGCCCGAGTTGATGCACCAAAGAT
CTAACCCTGCCATGGCTGCCGGGACGCCTCAGCCCCCTGGCCCTTATGGA
TATCCCTCCCAAGCGCAGCAGATGTGGGGTCAACCACCACCTCAGCCGCA
ACCATCTCCGCTCTCTGCCGCTGGACCTCAGGGCGTCGGCATGCCCCAGT
TCCCGTCGCAGTTACATACGCAACAATCACCCTCGCCACTCGCACACTCC
ATGCCGCAGCAGCAACAGCAGCAGCAGCAGCATTCGCAATCTCCTCGGAA
TCACCCCCGACCTTCGGCGCCGCCGATGCCTCAGACTTTCCCCATGCATC
CTCAGCAGGCGCCTCAACAGCAGCCCATGGCATCCATGGGATTCCCTGGT
GTCACGGCTGCGCCGTACCCAGCAGTGACTGCCGCCAGAGGCATGTATCC
TTCGACGCAGGGTCCGGGTGGTCAACAGTTTATGGCGGGCACTCCCCAGC
AGCCTGGTTTGGCCATGGGAATGAGCGCCGGCGGTGCTATGCCGGGATGG
CCTCCGGCTGGCCCCATGCAGCCCGGTCATCCGCAACCAGGCCAGTCCGG
CACTCCTCTGGGATGGTCCGGTTACTAGATGTACAGCACTCCTCAATCTT
CTGTTCCCGCTCCGATGAATGGCATCGGAGGGGAGCTCGTTGATGGGTCG
GGGACAATCAATCCCGCTGCCCTGAACAATGATGAACAGGGCCGTCGGAA
ACGAGGCCGTCCCCCAAAGACTCCGCGTCCGTCTGCGACAACCCCCAGCG
ATCAGACTTCCAATGTTCACCTCCAGACGCCCCGGTTGCAGACCCAGCCT
CTGCCGGCGCAAGCTGCCGTCAATGTATCACCTCCGCAGGCTTCTCCCCC
GGATAAAACGACGCCGACCAAGTCTACGCTCGTCAAGGCCCTACCCACCG
TTAGGGATCATACGACAGACCAGCTTAATGAAGAAGGCGACGAATACATC
CCCAAGGAATTCGATGACGCTGGTGAAAAGAAGGTTGATGCCATGGGCTA
CCCTCAAGGAGGCCGAGAGTACAAGTGTCGCACGTTCCGCGTTCCTCTGC
GTGGGAATAAGCTTTTCATGCTTGCGACCGAATGCGCAAGGGTGCTGGGC
TATCGCGACTCGTATCTCTTGTTCAACAAGAACCGGTCGCTGCACAAGAT
CATCGCGAGTCAGATCGAGAAGGATGATCTCATTCAGCAGGACATCCTGC
CCTACTCGTATCGTTCGCGCCAGATTGCTATCGTGACGGCCAAGTCGATG
TTCCGTCAGTTCGGCAGCCGCGTGATTGTCAATGGGCGACGCGTCCGCGA
CGACTACTGGGAGAGCAAAGCACGGAAACAAGGATTCACCGAGGATGATT
TGGCTGGTGAGAAACGACCCGGCGGCGCGAAAGCCCGGGATGCGGCGGCA
GCAGAAGCGGCGGGCGCAGCGAACTTTCTACCCACCCTAACCCATGGCGA
TGTCATCTACAGCAATGCGCTGGAATCGGTGCCTGGTAGCTTGCCTGTCG
GCCCCCCATCCTCGGTTTCCCTTGCGCCACCGCTCCCTATGATCCATATG
GCCACCACCACCGATGATCCCCGGCTGCGGGAGTATAACAGTATGCCTCG
CCCGCGTCAGGAATTGACCGGCCAGCCTTTCCAGGATCGCATTCAGCCCA
GCTCGGCCGCTGAAATACTTAACCAGGCTTCACACACGGCCGAGTTCAAC
AAGATTCTAACGTCACAACGGAGTTATCGCCAGAAGGGCCTGGACGACTT
TTACGCAAAGCAACGGGAGGTACCCGTTTCTGCAGCACAGTCACAGCCTG
GCCAATTGGATTCGACACCATCCGTGTCACAGCCCTTGCAGTCCCCACAG
ATGGCCTCCACGGGAATGATGAACGCGGCTCAGTCGCAGCAGCCCATGCT
TTCCCATCAGGCACCGATTATGTCTGGCCAGGCCGGTTTTCAGCCACCAG
CGGCTCATCAGCAGCCGCCTGTTGCACAGTCCCCTGTTCGGGGCGTACCC
CCGGTCCGGCCCGAGTTGATGCACCAAAGATCTAACCCTGCCATGGCTGC
CGGGACGCCTCAGCCCCCTGGCCCTTATGGATATCCCTCCCAAGCGCAGC
AGATGTGGGGTCAACCACCACCTCAGCCGCAACCATCTCCGCTCTCTGCC
GCTGGACCTCAGGGCGTCGGCATGCCCCAGTTCCCGTCGCAGTTACATAC
GCAACAATCACCCTCGCCACTCGCACACTCCATGCCGCAGCAGCAACAGC
AGCAGCAGCAGCATTCGCAATCTCCTCGGAATCACCCCCGACCTTCGGCG
CCGCCGATGCCTCAGACTTTCCCCATGCATCCTCAGCAGGCGCCTCAACA
GCAGCCCATGGCATCCATGGGATTCCCTGGTGTCACGGCTGCGCCGTACC
CAGCAGTGACTGCCGCCAGAGGCATGTATCCTTCGACGCAGGGTCCGGGT
GGTCAACAGTTTATGGCGGGCACTCCCCAGCAGCCTGGTTTGGCCATGGG
AATGAGCGCCGGCGGTGCTATGCCGGGATGGCCTCCGGCTGGCCCCATGC
AGCCCGGTCATCCGCAACCAGGCCAGTCCGGCACTCCTCTGGGATGGTCC
GGTTACTAGATGTACAGCACTCCTCAATCTTCTGTTCCCGCTCCGATGAA
TGGCATCGGAGGGGAGCTCGTTGATGGGTCGGGGACAATCAATCCCGCTG
CCCTGAACAATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012011-T1.utr3p1 | KJC3_012011-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012011-T1.utr5p1 | KJC3_012011-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013933 |
| DBxref | PFAM:PF08624 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2299702..2305212 - |
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