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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2325883..2327336- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012017-T1 ID=KJC3_012017-T1|Name=KJC3_012017-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1454bp|location=Sequence derived from alignment at ch8:2325883..2327336- (Aspergillus niger KJC3)
GGGAAAGTCCCGGTCTCTCCTTCATCCATCATCTACTCTTCCAAACTCCT
TTGTTTTGGCTTCCTCCGATCGACCATGATACTTTCCACCTTATAGTCAC
CTCTGTATATAGCACAAGGTTCTTTCCTGCAACCTTACCCACCTCAGATT
ACCCGGCCACAAACCTTCAGTGTCCAATCTTCCAAGGCATAAAAAGAGAG
TGGCCACCTCGCCTGCCTCCATACTCTCTCTTCTTCCTACCAGTCTAGAG
ATCTGGTTGACTGAGCTCCATCAATCACAATGGACTTTCTCCCAGGTAAC
ACCGCAAACGCAACCAACATCTCCTACAACTACCCCATGAACATCCCCAT
CAACACCACCAACATCACCACACCAATCTCTCCAAATATCAATAATACTA
ACCTCCCACCCACAGACTCCCTCCTCTCTCTAATCCAACAACATCCAACT
TTTCAAACCCTCACCTCCACTCCCATCGCCTCCCACCTCGCCTCCCTCCA
CACAACCTACCTGACCCCCTACATCTCCCACTGCCGCACCGCCTACCTCG
ACCCCTACCTCATCCACCCGCTCGCCTCGCTCCTCACCTCCTCCATGCCC
ATGCCCGACCTCGTCTCCATCTTCATCCTCGCCCTCGTCCTCATCATCTC
CCTCAAGATCCTCGACTATGCTCGCCGTCTCGTCATGTTCTGGGTCAATC
TGGCCCTGAGGTTGTTGTGGTGGGCGCTTGTGCTGGCTGCCTTGTGGTAT
GTGTACTCGGTGGGGATTGAGAAAACGGGCAGGGACTTGGGGTGGATGGT
TGGGCTTGTCGGTGGGTTTGTCGATGGGTTCAGGGATGGTGTTGAGGGCG
GGAGGGCTGTTACGGGGTCTGGCTCTGGGATGGGGTCCGGGGGGTATGTT
ACGGGGTTGGGAGGGGCGGGGAGGTATTAGGAAGTTTGAATATGATATAG
TATTGGGGTTGAGAGGGGAAGTCATTGGGGATATAGATACTTGGTTGAGT
TGGGAAACTGGTAATAATTAATGGGGTTTTATGGTGATGGTAGGATGGGA
TTGCCATTGGGAGATGGGAAGGAATGACACCGAGGTCGAGCCCGGTCCGA
GACCGGCCTGGACTGAGCTACGATTAAACGAAGTGCATGCTGCATGGATA
CATGGCTGGTTTTGGTTCGATTGAATTGAATGTGACATGAATTGAGTTTT
AGTTGCCTTGAATTGAGCGGTGAGGTATAGATATGTGTGCTATGGTATGC
TAAGCCATGTACACTGCAAGGATTGGAAGGGATATCATTTCAATTGCTGA
TGATAAGATAAGACAGAAGAAACAACTCACTTGGTCACTATCTATCTTTA
TTATCATTACTACTTCTGCAGTTGAGAAGCTGTTTACGGAGCTACCGAGT
GTCACAAGAGCAGAAAGGGCGCAGGTGCAGATGCATACTTGGCTATTATG
ATAT back to topCoding sequence (CDS) from alignment at ch8:2325883..2327336- >KJC3_012017-T1 ID=KJC3_012017-T1|Name=KJC3_012017-T1|organism=Aspergillus niger KJC3|type=CDS|length=1062bp|location=Sequence derived from alignment at ch8:2325883..2327336- (Aspergillus niger KJC3)
ACTCCCTCCTCTCTCTAATCCAACAACATCCAACTTTTCAAACCCTCACC
TCCACTCCCATCGCCTCCCACCTCGCCTCCCTCCACACAACCTACCTGAC
CCCCTACATCTCCCACTGCCGCACCGCCTACCTCGACCCCTACCTCATCC
ACCCGCTCGCCTCGCTCCTCACCTCCTCCATGCCCATGCCCGACCTCGTC
TCCATCTTCATCCTCGCCCTCGTCCTCATCATCTCCCTCAAGATCCTCGA
CTATGCTCGCCGTCTCGTCATGTTCTGGGTCAATCTGGCCCTGAGGTTGT
TGTGGTGGGCGCTTGTGCTGGCTGCCTTGTGGTATGTGTACTCGGTGGGG
ATTGAGAAAACGGGCAGGGACTTGGGGTGGATGGTTGGGCTTGTCGGTGG
GTTTGTCGATGGGTTCAGGGATGGTGTTGAGGGCGGGAGGGCTGTTACGG
GGTCTGGCTCTGGGATGGGGTCCGGGGGGTATGTTACGGGGTTGGGAGGG
GCGGGGAGGTATTAGATGGACTTTCTCCCAGACTCCCTCCTCTCTCTAAT
CCAACAACATCCAACTTTTCAAACCCTCACCTCCACTCCCATCGCCTCCC
ACCTCGCCTCCCTCCACACAACCTACCTGACCCCCTACATCTCCCACTGC
CGCACCGCCTACCTCGACCCCTACCTCATCCACCCGCTCGCCTCGCTCCT
CACCTCCTCCATGCCCATGCCCGACCTCGTCTCCATCTTCATCCTCGCCC
TCGTCCTCATCATCTCCCTCAAGATCCTCGACTATGCTCGCCGTCTCGTC
ATGTTCTGGGTCAATCTGGCCCTGAGGTTGTTGTGGTGGGCGCTTGTGCT
GGCTGCCTTGTGGTATGTGTACTCGGTGGGGATTGAGAAAACGGGCAGGG
ACTTGGGGTGGATGGTTGGGCTTGTCGGTGGGTTTGTCGATGGGTTCAGG
GATGGTGTTGAGGGCGGGAGGGCTGTTACGGGGTCTGGCTCTGGGATGGG
GTCCGGGGGGTATGTTACGGGGTTGGGAGGGGCGGGGAGGTATTAGATGG
ACTTTCTCCCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012017-T1.utr3p1 | KJC3_012017-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012017-T1.utr5p1 | KJC3_012017-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR024316 |
| DBxref | PFAM:PF12716 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2325883..2327336 - |
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