KJC3_012019-T1, KJC3_012019-T1 (mRNA) Aspergillus niger KJC3

Overview


Name	KJC3_012019-T1
Unique Name	KJC3_012019-T1
Type	mRNA
Organism	Aspergillus niger KJC3

Sequences

The following sequences are available for this feature:

mRNA from alignment at ch8:2334351..2336009-
coding sequence from alignment at ch8:2334351..2336009-

mRNA from alignment at ch8:2334351..2336009-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJC3_012019-T1 ID=KJC3_012019-T1|Name=KJC3_012019-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1659bp|location=Sequence derived from alignment at ch8:2334351..2336009- (Aspergillus niger KJC3)
ATGTCTCGATCCTTCAACGGGTGCAAACGATGTAAAGCCCGGCGGCAGAA
ATGCGACGAGCAGCGTCCCAGTTGTGGTCGCTGCATGTCGGCCGGCACGC
AATGTCGATATGCGATGCAGCTGCAGTGGGGGGGCCGAGCCTTTTCGCGC
TCAAGGTTTGGAGCCTGCGTGGGAACAGGAGGCATGCAAAAACTAGGTGG
GTGAATGCCATGTAGCCTGTTGTATACCGGGATATACTGATCTAACTTTG
CTACTCGCAATCAGAGTACTCCCCGGGCGAATTCATCTACACCACCAAAG
CTGCGGCTGCTCTTTCTCCGGGCACAATAGCAACATCTCCTTCTACCCAA
CCGACGAACACCACCTTAGTCCGCCATATTGATCCGTTCGCCTCCCTCTC
TACCGATCAGAAATCCCTCCTACACCACTTCCTCAATGATGCCTCTCAGA
TCACGGCTTGTCATTCCGGCATGCAGCGCGATATCTGCAAGATGCTCGTC
CCTATGGCCCTTCAGACCCCGTCCCTCCTCTACGCAACCATGGCCCTCTC
CGCTATCCACCTCCAAGCCCTCCACAACCAATCTGAAAACGTCAAGTCTG
CACCCGAAATCGCACGCTTTATGGCCCTCAGTTTAGAACATTTCAGAACG
GAACTACAGAACCCTGCGAGCAGGGGATCGGATGCGCTGCTTGCAACCGC
CCGGACCCTCTGCCTCGCCGAGATTCATTCCGGTGCAATTCACCCCAATT
CCTGGCGCGCACATATCGAAGGTGCCCGGGCTCTGATGGAGGCCTCGGAT
CAGAGCGGGGCGCTGTCCCCCAAGTCGCCGGAGGGGTTCAGACGGTATCT
AGATAGATGGTATCGGTCAATTGTGTCGCTGACAGCGTTGACGGGGAATG
GGCCGCCCATAGGTGAAGCTACGGATCAGCTGGTCTCCATTGGACCAAAC
CAGTCGGCCTCGCCGGATTACTTGGATGATTACTGGGGTTTTACGGTAAA
CTTGGCCACAATCTTCCGGAGGATTGGGGCTGTCGCGTGGCGGGAGCATC
AGAGTCGGGGCCAGGAAGGTGATGAGAGTTCTGTCCAAGGGAACGAGATC
AGCGTACACAACGAAGCTGCAGCGCTGGAGTCGTCGCTCCGCCATCTCAT
GGAACAAGAAGTGGCTTCGCAGCCCGCATTCTACCCTGGCGTCGTGGAGG
GTCTTTCTGCGGAATGTATCCAACAGCTCATGCTCTGTAACGAGGCCTTC
CAACTCAGTGCTCTCATTCAGATCCATCGTCGACTGCGAAAGACACCAGC
GTCTGCACCGGTGGTGCAGGAGTCGGTTAAGAGGATCCTTGAATGCACGG
CTCAAATCGGGCCGTCTCCGGGACTGAGCCCGTGGGTAATGCTGACTACC
CCGCTATTCATCGCTGGGTGTGAGGCGCGCGGAGAAGACCGTGAGCAAGT
GCGACGGCTACTGTCCTCGCTGCACGATACCATTCGAGTACCAAATGTGT
TGCAGTCATTGAAGTTTCTGGAACAGTATTGGGCGAATCAGTTGGATGAG
AACGAGGGGTGGAGTCAATATCTCGGTATGTACAATTCGTCTGTTAAAAA
AGAAGATAATACTAACGCGATATTCAGATCGGATGAGATTTGATTTTATC
CCGTACTAA

Coding sequence (CDS) from alignment at ch8:2334351..2336009-

>KJC3_012019-T1 ID=KJC3_012019-T1|Name=KJC3_012019-T1|organism=Aspergillus niger KJC3|type=CDS|length=4617bp|location=Sequence derived from alignment at ch8:2334351..2336009- (Aspergillus niger KJC3)
ATCGGATGAGATTTGATTTTATCCCGTACTAAAGTACTCCCCGGGCGAAT
TCATCTACACCACCAAAGCTGCGGCTGCTCTTTCTCCGGGCACAATAGCA
ACATCTCCTTCTACCCAACCGACGAACACCACCTTAGTCCGCCATATTGA
TCCGTTCGCCTCCCTCTCTACCGATCAGAAATCCCTCCTACACCACTTCC
TCAATGATGCCTCTCAGATCACGGCTTGTCATTCCGGCATGCAGCGCGAT
ATCTGCAAGATGCTCGTCCCTATGGCCCTTCAGACCCCGTCCCTCCTCTA
CGCAACCATGGCCCTCTCCGCTATCCACCTCCAAGCCCTCCACAACCAAT
CTGAAAACGTCAAGTCTGCACCCGAAATCGCACGCTTTATGGCCCTCAGT
TTAGAACATTTCAGAACGGAACTACAGAACCCTGCGAGCAGGGGATCGGA
TGCGCTGCTTGCAACCGCCCGGACCCTCTGCCTCGCCGAGATTCATTCCG
GTGCAATTCACCCCAATTCCTGGCGCGCACATATCGAAGGTGCCCGGGCT
CTGATGGAGGCCTCGGATCAGAGCGGGGCGCTGTCCCCCAAGTCGCCGGA
GGGGTTCAGACGGTATCTAGATAGATGGTATCGGTCAATTGTGTCGCTGA
CAGCGTTGACGGGGAATGGGCCGCCCATAGGTGAAGCTACGGATCAGCTG
GTCTCCATTGGACCAAACCAGTCGGCCTCGCCGGATTACTTGGATGATTA
CTGGGGTTTTACGGTAAACTTGGCCACAATCTTCCGGAGGATTGGGGCTG
TCGCGTGGCGGGAGCATCAGAGTCGGGGCCAGGAAGGTGATGAGAGTTCT
GTCCAAGGGAACGAGATCAGCGTACACAACGAAGCTGCAGCGCTGGAGTC
GTCGCTCCGCCATCTCATGGAACAAGAAGTGGCTTCGCAGCCCGCATTCT
ACCCTGGCGTCGTGGAGGGTCTTTCTGCGGAATGTATCCAACAGCTCATG
CTCTGTAACGAGGCCTTCCAACTCAGTGCTCTCATTCAGATCCATCGTCG
ACTGCGAAAGACACCAGCGTCTGCACCGGTGGTGCAGGAGTCGGTTAAGA
GGATCCTTGAATGCACGGCTCAAATCGGGCCGTCTCCGGGACTGAGCCCG
TGGGTAATGCTGACTACCCCGCTATTCATCGCTGGGTGTGAGGCGCGCGG
AGAAGACCGTGAGCAAGTGCGACGGCTACTGTCCTCGCTGCACGATACCA
TTCGAGTACCAAATGTGTTGCAGTCATTGAAGTTTCTGGAACAGTATTGG
GCGAATCAGTTGGATGAGAACGAGGGGTGGAGTCAATATCTCGATGTCTC
GATCCTTCAACGGGTGCAAACGATGTAAAGCCCGGCGGCAGAAATGCGAC
GAGCAGCGTCCCAGTTGTGGTCGCTGCATGTCGGCCGGCACGCAATGTCG
ATATGCGATGCAGCTGCAGTGGGGGGGCCGAGCCTTTTCGCGCTCAAGGT
TTGGAGCCTGCGTGGGAACAGGAGGCATGCAAAAACTAGATCGGATGAGA
TTTGATTTTATCCCGTACTAAAGTACTCCCCGGGCGAATTCATCTACACC
ACCAAAGCTGCGGCTGCTCTTTCTCCGGGCACAATAGCAACATCTCCTTC
TACCCAACCGACGAACACCACCTTAGTCCGCCATATTGATCCGTTCGCCT
CCCTCTCTACCGATCAGAAATCCCTCCTACACCACTTCCTCAATGATGCC
TCTCAGATCACGGCTTGTCATTCCGGCATGCAGCGCGATATCTGCAAGAT
GCTCGTCCCTATGGCCCTTCAGACCCCGTCCCTCCTCTACGCAACCATGG
CCCTCTCCGCTATCCACCTCCAAGCCCTCCACAACCAATCTGAAAACGTC
AAGTCTGCACCCGAAATCGCACGCTTTATGGCCCTCAGTTTAGAACATTT
CAGAACGGAACTACAGAACCCTGCGAGCAGGGGATCGGATGCGCTGCTTG
CAACCGCCCGGACCCTCTGCCTCGCCGAGATTCATTCCGGTGCAATTCAC
CCCAATTCCTGGCGCGCACATATCGAAGGTGCCCGGGCTCTGATGGAGGC
CTCGGATCAGAGCGGGGCGCTGTCCCCCAAGTCGCCGGAGGGGTTCAGAC
GGTATCTAGATAGATGGTATCGGTCAATTGTGTCGCTGACAGCGTTGACG
GGGAATGGGCCGCCCATAGGTGAAGCTACGGATCAGCTGGTCTCCATTGG
ACCAAACCAGTCGGCCTCGCCGGATTACTTGGATGATTACTGGGGTTTTA
CGGTAAACTTGGCCACAATCTTCCGGAGGATTGGGGCTGTCGCGTGGCGG
GAGCATCAGAGTCGGGGCCAGGAAGGTGATGAGAGTTCTGTCCAAGGGAA
CGAGATCAGCGTACACAACGAAGCTGCAGCGCTGGAGTCGTCGCTCCGCC
ATCTCATGGAACAAGAAGTGGCTTCGCAGCCCGCATTCTACCCTGGCGTC
GTGGAGGGTCTTTCTGCGGAATGTATCCAACAGCTCATGCTCTGTAACGA
GGCCTTCCAACTCAGTGCTCTCATTCAGATCCATCGTCGACTGCGAAAGA
CACCAGCGTCTGCACCGGTGGTGCAGGAGTCGGTTAAGAGGATCCTTGAA
TGCACGGCTCAAATCGGGCCGTCTCCGGGACTGAGCCCGTGGGTAATGCT
GACTACCCCGCTATTCATCGCTGGGTGTGAGGCGCGCGGAGAAGACCGTG
AGCAAGTGCGACGGCTACTGTCCTCGCTGCACGATACCATTCGAGTACCA
AATGTGTTGCAGTCATTGAAGTTTCTGGAACAGTATTGGGCGAATCAGTT
GGATGAGAACGAGGGGTGGAGTCAATATCTCGATGTCTCGATCCTTCAAC
GGGTGCAAACGATGTAAAGCCCGGCGGCAGAAATGCGACGAGCAGCGTCC
CAGTTGTGGTCGCTGCATGTCGGCCGGCACGCAATGTCGATATGCGATGC
AGCTGCAGTGGGGGGGCCGAGCCTTTTCGCGCTCAAGGTTTGGAGCCTGC
GTGGGAACAGGAGGCATGCAAAAACTAGATCGGATGAGATTTGATTTTAT
CCCGTACTAAAGTACTCCCCGGGCGAATTCATCTACACCACCAAAGCTGC
GGCTGCTCTTTCTCCGGGCACAATAGCAACATCTCCTTCTACCCAACCGA
CGAACACCACCTTAGTCCGCCATATTGATCCGTTCGCCTCCCTCTCTACC
GATCAGAAATCCCTCCTACACCACTTCCTCAATGATGCCTCTCAGATCAC
GGCTTGTCATTCCGGCATGCAGCGCGATATCTGCAAGATGCTCGTCCCTA
TGGCCCTTCAGACCCCGTCCCTCCTCTACGCAACCATGGCCCTCTCCGCT
ATCCACCTCCAAGCCCTCCACAACCAATCTGAAAACGTCAAGTCTGCACC
CGAAATCGCACGCTTTATGGCCCTCAGTTTAGAACATTTCAGAACGGAAC
TACAGAACCCTGCGAGCAGGGGATCGGATGCGCTGCTTGCAACCGCCCGG
ACCCTCTGCCTCGCCGAGATTCATTCCGGTGCAATTCACCCCAATTCCTG
GCGCGCACATATCGAAGGTGCCCGGGCTCTGATGGAGGCCTCGGATCAGA
GCGGGGCGCTGTCCCCCAAGTCGCCGGAGGGGTTCAGACGGTATCTAGAT
AGATGGTATCGGTCAATTGTGTCGCTGACAGCGTTGACGGGGAATGGGCC
GCCCATAGGTGAAGCTACGGATCAGCTGGTCTCCATTGGACCAAACCAGT
CGGCCTCGCCGGATTACTTGGATGATTACTGGGGTTTTACGGTAAACTTG
GCCACAATCTTCCGGAGGATTGGGGCTGTCGCGTGGCGGGAGCATCAGAG
TCGGGGCCAGGAAGGTGATGAGAGTTCTGTCCAAGGGAACGAGATCAGCG
TACACAACGAAGCTGCAGCGCTGGAGTCGTCGCTCCGCCATCTCATGGAA
CAAGAAGTGGCTTCGCAGCCCGCATTCTACCCTGGCGTCGTGGAGGGTCT
TTCTGCGGAATGTATCCAACAGCTCATGCTCTGTAACGAGGCCTTCCAAC
TCAGTGCTCTCATTCAGATCCATCGTCGACTGCGAAAGACACCAGCGTCT
GCACCGGTGGTGCAGGAGTCGGTTAAGAGGATCCTTGAATGCACGGCTCA
AATCGGGCCGTCTCCGGGACTGAGCCCGTGGGTAATGCTGACTACCCCGC
TATTCATCGCTGGGTGTGAGGCGCGCGGAGAAGACCGTGAGCAAGTGCGA
CGGCTACTGTCCTCGCTGCACGATACCATTCGAGTACCAAATGTGTTGCA
GTCATTGAAGTTTCTGGAACAGTATTGGGCGAATCAGTTGGATGAGAACG
AGGGGTGGAGTCAATATCTCGATGTCTCGATCCTTCAACGGGTGCAAACG
ATGTAAAGCCCGGCGGCAGAAATGCGACGAGCAGCGTCCCAGTTGTGGTC
GCTGCATGTCGGCCGGCACGCAATGTCGATATGCGATGCAGCTGCAGTGG
GGGGGCCGAGCCTTTTCGCGCTCAAGGTTTGGAGCCTGCGTGGGAACAGG
AGGCATGCAAAAACTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0042025	host cell nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270	zinc ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
KJC3_012019	KJC3_012019	Aspergillus niger KJC3	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_012019-T1	KJC3_012019-T1-protein	Aspergillus niger KJC3	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_012019-T1.cds	KJC3_012019-T1.cds	Aspergillus niger KJC3	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_012019-T1.exon3	KJC3_012019-T1.exon3	Aspergillus niger KJC3	exon
KJC3_012019-T1.exon2	KJC3_012019-T1.exon2	Aspergillus niger KJC3	exon
KJC3_012019-T1.exon1	KJC3_012019-T1.exon1	Aspergillus niger KJC3	exon

Properties


Property Name	Value
DBxref	InterPro:IPR021858
DBxref	InterPro:IPR036864
DBxref	InterPro:IPR001138
DBxref	PFAM:PF00172
DBxref	PFAM:PF11951
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC3	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ch8	supercontig	ch8:2334351..2336009 -

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KJC3_012019-T1, KJC3_012019-T1 (mRNA) Aspergillus niger KJC3