You are here

Home

KJC3_012022-T1, KJC3_012022-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012022-T1
Unique NameKJC3_012022-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2341719..2342829-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012022-T1 ID=KJC3_012022-T1|Name=KJC3_012022-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1111bp|location=Sequence derived from alignment at ch8:2341719..2342829- (Aspergillus niger KJC3)
CAATGAATACCAGTCAGGAAGCTAAGTTTCCTCTTCACGAGGCTGCCCGG
GAGGGCAAAAGTACGAGGCATTCAACCCGGACATTGTGATAAGCTCTAAC
CGATCTCCTCCAGCTCAAATCGCTGAATCTCTCCTCAGCGTACGTACTCC
AAAGCTGCCCCGCACCGCCATCAGGGAGCTCTATACAACCTCACTATCAG
CTCAAAGACCGTCTCGCTGATGGCTTCTAGGCCAACCCCAAGCTAGCAAA
TGTCAAAGATGACGATGATCGCCTTCCCATCCACTGGGCGGTAGCATACA
ACCGTCTCCCGATTGTGGAGCTACTGATATCCAACAAGCACTTTGATCCC
GATGTCGAGGTCCGTTATTGTCTCATCTTTTGTAATGTACCACGCCAGAA
CATCACTAATATTTCCATAGGATGGCTCCGGCTGGACACCACTCATGATT
GCATCTAGCTTGAAGAACGCCGAAGGCGATCCCATCATCGATCTCCTCCT
CAAGAAAGGCGCAGACGTCAGCACGAAGAGCGTCTCGGGCCAGGTACTTC
CCGTCCCTTCCTCCTAGGCCACCTTTTCCCTAACTTAATATCTGTGTCTA
CAATAGAACGCCCTCCACTTTGCAACTTCCAAAGCCAACCTCTCCACCGT
CCGCACCCTCATCGCCAACAAATGCAGCGCAAGAGTAAAGGATAGACGCG
GACAGCTGCCTCTGCACCGAGCAGCGGCGATTGGATCCTCGCCTATCATC
AAGATCCTTCTGGAGGAGGGGAAGAGTCCCGTCAATGCAACGGATGTTGA
TGGGCTGACAGCTTTACATCATGCCGTGTCAGAGGGTCACGGCGATGCAG
CGATTACGTTGCTCAAGGCTGGTGCGGAGGCAGATAAGAGGGATTCGAAT
GGTGTTTTGGCCATTGATATGGCGCCGGATAGCAAGGTTCGTCTTCTTCC
TTTTTTATCATATATAAATCGAGGTGGGAGTGTGTGCTGATAGTGGTATG
CGTATAGGTGCGGAGCTATATCCTGCAAACAGCGGAGAGGGAGGGGATCG
AGTTATAGTTTATTCGGTATGTTGGATAGGAGGAACGAATGGATGGAAGA
TATAAAAAGGA
back to top

Coding sequence (CDS) from alignment at ch8:2341719..2342829-

>KJC3_012022-T1 ID=KJC3_012022-T1|Name=KJC3_012022-T1|organism=Aspergillus niger KJC3|type=CDS|length=4302bp|location=Sequence derived from alignment at ch8:2341719..2342829- (Aspergillus niger KJC3)
GTGCGGAGCTATATCCTGCAAACAGCGGAGAGGGAGGGGATCGAGTTATA
GAACGCCCTCCACTTTGCAACTTCCAAAGCCAACCTCTCCACCGTCCGCA
CCCTCATCGCCAACAAATGCAGCGCAAGAGTAAAGGATAGACGCGGACAG
CTGCCTCTGCACCGAGCAGCGGCGATTGGATCCTCGCCTATCATCAAGAT
CCTTCTGGAGGAGGGGAAGAGTCCCGTCAATGCAACGGATGTTGATGGGC
TGACAGCTTTACATCATGCCGTGTCAGAGGGTCACGGCGATGCAGCGATT
ACGTTGCTCAAGGCTGGTGCGGAGGCAGATAAGAGGGATTCGAATGGTGT
TTTGGCCATTGATATGGCGCCGGATAGCAAGGATGGCTCCGGCTGGACAC
CACTCATGATTGCATCTAGCTTGAAGAACGCCGAAGGCGATCCCATCATC
GATCTCCTCCTCAAGAAAGGCGCAGACGTCAGCACGAAGAGCGTCTCGGG
CCAGGCCAACCCCAAGCTAGCAAATGTCAAAGATGACGATGATCGCCTTC
CCATCCACTGGGCGGTAGCATACAACCGTCTCCCGATTGTGGAGCTACTG
ATATCCAACAAGCACTTTGATCCCGATGTCGAGCTCAAATCGCTGAATCT
CTCCTCAGCATGAATACCAGTCAGGAAGCTAAGTTTCCTCTTCACGAGGC
TGCCCGGGAGGGCAAAAGTGCGGAGCTATATCCTGCAAACAGCGGAGAGG
GAGGGGATCGAGTTATAGAACGCCCTCCACTTTGCAACTTCCAAAGCCAA
CCTCTCCACCGTCCGCACCCTCATCGCCAACAAATGCAGCGCAAGAGTAA
AGGATAGACGCGGACAGCTGCCTCTGCACCGAGCAGCGGCGATTGGATCC
TCGCCTATCATCAAGATCCTTCTGGAGGAGGGGAAGAGTCCCGTCAATGC
AACGGATGTTGATGGGCTGACAGCTTTACATCATGCCGTGTCAGAGGGTC
ACGGCGATGCAGCGATTACGTTGCTCAAGGCTGGTGCGGAGGCAGATAAG
AGGGATTCGAATGGTGTTTTGGCCATTGATATGGCGCCGGATAGCAAGGA
TGGCTCCGGCTGGACACCACTCATGATTGCATCTAGCTTGAAGAACGCCG
AAGGCGATCCCATCATCGATCTCCTCCTCAAGAAAGGCGCAGACGTCAGC
ACGAAGAGCGTCTCGGGCCAGGCCAACCCCAAGCTAGCAAATGTCAAAGA
TGACGATGATCGCCTTCCCATCCACTGGGCGGTAGCATACAACCGTCTCC
CGATTGTGGAGCTACTGATATCCAACAAGCACTTTGATCCCGATGTCGAG
CTCAAATCGCTGAATCTCTCCTCAGCATGAATACCAGTCAGGAAGCTAAG
TTTCCTCTTCACGAGGCTGCCCGGGAGGGCAAAAGTGCGGAGCTATATCC
TGCAAACAGCGGAGAGGGAGGGGATCGAGTTATAGAACGCCCTCCACTTT
GCAACTTCCAAAGCCAACCTCTCCACCGTCCGCACCCTCATCGCCAACAA
ATGCAGCGCAAGAGTAAAGGATAGACGCGGACAGCTGCCTCTGCACCGAG
CAGCGGCGATTGGATCCTCGCCTATCATCAAGATCCTTCTGGAGGAGGGG
AAGAGTCCCGTCAATGCAACGGATGTTGATGGGCTGACAGCTTTACATCA
TGCCGTGTCAGAGGGTCACGGCGATGCAGCGATTACGTTGCTCAAGGCTG
GTGCGGAGGCAGATAAGAGGGATTCGAATGGTGTTTTGGCCATTGATATG
GCGCCGGATAGCAAGGATGGCTCCGGCTGGACACCACTCATGATTGCATC
TAGCTTGAAGAACGCCGAAGGCGATCCCATCATCGATCTCCTCCTCAAGA
AAGGCGCAGACGTCAGCACGAAGAGCGTCTCGGGCCAGGCCAACCCCAAG
CTAGCAAATGTCAAAGATGACGATGATCGCCTTCCCATCCACTGGGCGGT
AGCATACAACCGTCTCCCGATTGTGGAGCTACTGATATCCAACAAGCACT
TTGATCCCGATGTCGAGCTCAAATCGCTGAATCTCTCCTCAGCATGAATA
CCAGTCAGGAAGCTAAGTTTCCTCTTCACGAGGCTGCCCGGGAGGGCAAA
AGTGCGGAGCTATATCCTGCAAACAGCGGAGAGGGAGGGGATCGAGTTAT
AGAACGCCCTCCACTTTGCAACTTCCAAAGCCAACCTCTCCACCGTCCGC
ACCCTCATCGCCAACAAATGCAGCGCAAGAGTAAAGGATAGACGCGGACA
GCTGCCTCTGCACCGAGCAGCGGCGATTGGATCCTCGCCTATCATCAAGA
TCCTTCTGGAGGAGGGGAAGAGTCCCGTCAATGCAACGGATGTTGATGGG
CTGACAGCTTTACATCATGCCGTGTCAGAGGGTCACGGCGATGCAGCGAT
TACGTTGCTCAAGGCTGGTGCGGAGGCAGATAAGAGGGATTCGAATGGTG
TTTTGGCCATTGATATGGCGCCGGATAGCAAGGATGGCTCCGGCTGGACA
CCACTCATGATTGCATCTAGCTTGAAGAACGCCGAAGGCGATCCCATCAT
CGATCTCCTCCTCAAGAAAGGCGCAGACGTCAGCACGAAGAGCGTCTCGG
GCCAGGCCAACCCCAAGCTAGCAAATGTCAAAGATGACGATGATCGCCTT
CCCATCCACTGGGCGGTAGCATACAACCGTCTCCCGATTGTGGAGCTACT
GATATCCAACAAGCACTTTGATCCCGATGTCGAGCTCAAATCGCTGAATC
TCTCCTCAGCATGAATACCAGTCAGGAAGCTAAGTTTCCTCTTCACGAGG
CTGCCCGGGAGGGCAAAAGTGCGGAGCTATATCCTGCAAACAGCGGAGAG
GGAGGGGATCGAGTTATAGAACGCCCTCCACTTTGCAACTTCCAAAGCCA
ACCTCTCCACCGTCCGCACCCTCATCGCCAACAAATGCAGCGCAAGAGTA
AAGGATAGACGCGGACAGCTGCCTCTGCACCGAGCAGCGGCGATTGGATC
CTCGCCTATCATCAAGATCCTTCTGGAGGAGGGGAAGAGTCCCGTCAATG
CAACGGATGTTGATGGGCTGACAGCTTTACATCATGCCGTGTCAGAGGGT
CACGGCGATGCAGCGATTACGTTGCTCAAGGCTGGTGCGGAGGCAGATAA
GAGGGATTCGAATGGTGTTTTGGCCATTGATATGGCGCCGGATAGCAAGG
ATGGCTCCGGCTGGACACCACTCATGATTGCATCTAGCTTGAAGAACGCC
GAAGGCGATCCCATCATCGATCTCCTCCTCAAGAAAGGCGCAGACGTCAG
CACGAAGAGCGTCTCGGGCCAGGCCAACCCCAAGCTAGCAAATGTCAAAG
ATGACGATGATCGCCTTCCCATCCACTGGGCGGTAGCATACAACCGTCTC
CCGATTGTGGAGCTACTGATATCCAACAAGCACTTTGATCCCGATGTCGA
GCTCAAATCGCTGAATCTCTCCTCAGCATGAATACCAGTCAGGAAGCTAA
GTTTCCTCTTCACGAGGCTGCCCGGGAGGGCAAAAGTGCGGAGCTATATC
CTGCAAACAGCGGAGAGGGAGGGGATCGAGTTATAGAACGCCCTCCACTT
TGCAACTTCCAAAGCCAACCTCTCCACCGTCCGCACCCTCATCGCCAACA
AATGCAGCGCAAGAGTAAAGGATAGACGCGGACAGCTGCCTCTGCACCGA
GCAGCGGCGATTGGATCCTCGCCTATCATCAAGATCCTTCTGGAGGAGGG
GAAGAGTCCCGTCAATGCAACGGATGTTGATGGGCTGACAGCTTTACATC
ATGCCGTGTCAGAGGGTCACGGCGATGCAGCGATTACGTTGCTCAAGGCT
GGTGCGGAGGCAGATAAGAGGGATTCGAATGGTGTTTTGGCCATTGATAT
GGCGCCGGATAGCAAGGATGGCTCCGGCTGGACACCACTCATGATTGCAT
CTAGCTTGAAGAACGCCGAAGGCGATCCCATCATCGATCTCCTCCTCAAG
AAAGGCGCAGACGTCAGCACGAAGAGCGTCTCGGGCCAGGCCAACCCCAA
GCTAGCAAATGTCAAAGATGACGATGATCGCCTTCCCATCCACTGGGCGG
TAGCATACAACCGTCTCCCGATTGTGGAGCTACTGATATCCAACAAGCAC
TTTGATCCCGATGTCGAGCTCAAATCGCTGAATCTCTCCTCAGCATGAAT
ACCAGTCAGGAAGCTAAGTTTCCTCTTCACGAGGCTGCCCGGGAGGGCAA
AA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012022KJC3_012022Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012022-T1KJC3_012022-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012022-T1.cdsKJC3_012022-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012022-T1.utr3p1KJC3_012022-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012022-T1.exon6KJC3_012022-T1.exon6Aspergillus niger KJC3exon
KJC3_012022-T1.exon5KJC3_012022-T1.exon5Aspergillus niger KJC3exon
KJC3_012022-T1.exon4KJC3_012022-T1.exon4Aspergillus niger KJC3exon
KJC3_012022-T1.exon3KJC3_012022-T1.exon3Aspergillus niger KJC3exon
KJC3_012022-T1.exon2KJC3_012022-T1.exon2Aspergillus niger KJC3exon
KJC3_012022-T1.exon1KJC3_012022-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012022-T1.utr5p1KJC3_012022-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2341719..2342829 -
Powered by Drupal