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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2358334..2362730+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012029-T2 ID=KJC3_012029-T2|Name=KJC3_012029-T2|organism=Aspergillus niger KJC3|type=mRNA|length=4397bp|location=Sequence derived from alignment at ch8:2358334..2362730+ (Aspergillus niger KJC3)
ATCAAGTCTACATTTGGCCGTACAACATCCGTCATGGCCAAAAGTAAGGG
GAAGCGCTCTTCCGGAGCAGACAACATCATCCCCGACGGTGGTGTCGCTG
TTAACGACTCCGCCCCCGGTGCTGATGCTCTTCCACAACTCGAGGAAAGT
GCATTTGCCGGCTTGCGACAGAAGATCGAACAGCGACTGAAGGACCAGAG
CGCCTCGAAGCAGAAGCCGAAGAACAACAAGGGAAAGTCGGGTCCCAGTG
ATACGCCACAGAAGAAAGAGCCTGCACCCAAGCCCGAGCCGAAGCAAGCG
TCCAACAACGACAAGAACAACAAAGGCAAGAAGCGGGACCGCAATGGTGA
GGTGATCGCAAGGGAGGAGAAGGCTGTTTCGAAAGATAAGAAGCCGGCAT
CGAAGGAGAACCAGGCCGATGTTTTGCGGCAAGAGATTTTGGCCCTCGGA
GGCACGGAGGAAGATTTGGATCTCATCGCCGGGGTTGGTTCGGACTCTGA
AGTTGAAGATGCTACAGAGAAGAAATCGAAGGGCAAGTCCGACGATGCTT
CTCTCCGGAAGGAACTTTCGAGTATTCTGGCTGCCGCCGGTCAGGTTGTC
CCTGACGACCTAGAGGACGAAGAGGTGGAGGAAGAGGAAGCCGAGGAGGC
AGAAGCAAGCGAGGAAGATGACGTCGAAGAGGATGAGGAGGAAGAAGCCG
AGGATGATGAGGACGAGGAACCCTCAGAGGATGAAGAGCCAGCTCCCGCC
CCCGCCCCGAAGGAGACCAAAGAATCGGCCAAGAAAGAGAAAGCCAACAA
GGAACCCGCCGCCGAAGTCGTCTTCCCCAAGGAGTTTTCCAAACTCGTGA
GTATAGCCAGCCTAAATCACAAATATCCTTCTAATGTAGCCATTAGGCTG
TTCGACCCAGGTCCGATTGGTACATGACGGAACTGCCCTCGATACCGACA
GCACAAGCAAAGTCGCTGCCTCGTCATGTGGTGGATCGGTTCTACGATTA
CGCCGTCTCTCTGCTCGAGAAGGAAAACAAGATGTACGCGGAAGCGCAGC
AAGCATCTGCCTCTTCATCCCACAAGTTCTACAGCACGATCATGTCTACC
GGTACACTTAGCGATAAGACTTCTGCCTTGACTCTTGCTGTTCAAGAGTC
GCCTCTTCACAACACCAAGGCATTGGGTGACCTCATCGCCCTTGGAAAGA
AGCGCAGTCGTGCTCAGGCCGTGGAAGTCTTGAGATCGCTCAAGGATATG
TTCGCTCAAGGAACGTTACTTCCTAGCGACAGGAGACTCCGGGCTTTTGC
CAACCAGCCGTCTCTTATTGCTGCGTTGCAAGGCGCAGGCAGCAGGTGGT
CCGAAGGAGACCCTCTCCCTGGAGGGCTTCAGAAGAGCCACCTGATTGTT
TGGGCTTATGAGCACTTCCTGAAGGATCAGTTTTTCGAAGTCCTTAAGAT
CCTCGAAGTCTGGTGTAATGATGAGATTGAGTTCTCTCGCTCCAGAGCTG
TCAGCTACGTTTACGAACTACTCAAGGAGAAGCCGGAGCAGGAAACGAAC
CTCCTGCGACTGTTGGTCAACAAGCTGGGAGATACGTCGAAGAAGATTGC
TTCGCGGGCATCCTACCTCCTGTTGCAACTTGAACAGGCCCACCCTCTGA
TGAAGCCCACCATCATCGCCGCTGTGGAGGAAGTCCTTTTCCGTCCTGGT
CAGAGTCAACATGCCAAATACTATGCTGTTATCACGCTGAACCAAACGGT
CTTGAGTCTCAAGGAGGAGACCGTTGCATTGAAGTTGCTTGACATCTATT
TCTCGATTTTTGTTGCTCTCCTGCGGCCTAACAAGGAGCCAAAGGGCAAG
AAGAACGGAAAGTATGGCAACAAGCACAACAAGAACAAGGGGAAGGAGGA
CTCTGATAAGAGTCTGGCTCAGACTGAAGAGGTGCGGGATAAACTGACCT
CTGCAGTCCTGACTGGTGTCAACCGAGCCTACCCATTTACCAGCTCGGAT
AGTGAACGGTACGTTTCGCATGTCCTTAATTTCTATACATCGCTAATCCG
TCTTTAGTCTCTCCAAGCACATCGATACTCTCTTCCGCATCACACACTCC
GCCAACTTCAACACCAGTATCCAGGCGCTCATGCTCATCCAGCAGATCAC
CGCGACTCACCAGGTCGGTGCTGATCGCTTCTACCGCACGTTATACGAGT
CTCTTCTCGACCCGCGGGTTGCTACATCCTCTAAGCAGTCGCTGTATCTC
AACCTTCTGTTCAAGGCCTTGAAGAACGATCTGAACACCCGTCGTGTGAA
GGCGTTCGTGAAGCGTATTGTTCAGGTTCTTGGGCTGCACCAGCCCGCGT
TCATTTGCGGTGTCTTCTACCTGATCCGTGAACTGGAGAAGACATTCCCC
GATCTCGCTTCCTTGTTCGATCAACCAGAGGAGAACGATAGCGATGATGA
GGAGGTGTTCCGCGATGTTCCTGATGAGGATGACGAGCCGCAGGAACAGC
CAGAAGCCCCACAGAAGTCAGAGAAGCCATCCACGCAATACGACCCCCGC
AAGAGAGACCCCGGCCACAGCAATGCCGACCGGACATGTCTGTGGGAATT
GGTAAGTCTATCTTGATAATGAAATGTTGTCTCTCGCTAATAAGGTTTTA
TAGCTGCCTTACTTGTCTCATTTCCACCCCTCCGTGTCTGTGAACGCGGC
TCACCTGCTCGACCACAAGCCGATGTCCGGACAGCCCGATCTCACATTGC
ACACGTTGTCTCACTTCCTCGACCGCTTCGTCTACCGGACCCCCAAGGCC
TCTGCGCTCACCCGTGGTTCATCTATTATGCAACCGCTGGCAGGCAGCGA
GGCCAAGGACCGGTTGGTCTCGGGCGGCAAGCAGTTCCAGCAGCTGCCTC
TCAACTCGGAGGCCTTCTGGAAGAAGAAGTCCGAGGAAGTTGCAGCGGAA
GATGTCTTCTTCCACGAATACTTCAGCCGCATTGGAAAGGGTCAAGACAA
GGACAAGACCAAGAAGGCCAAGGATGCGGTCGACGAAGACGAGGAGGATG
CCGAACTCAGCGGCGCCGAGTCCGAGATCTGGAAGGCGTTGGTTGACTCC
CGTCCCGACTTGGAAGCAGGCAGCGACGACGACCTCGACATGGACGATCT
CGAGTCCGCATACGACAAGTCCGACGAAGAAGGCGGCGACAGCGAAGTCG
AACTCAACCTTGATTCGGATGACGAGATGGAGGATATCGAGGAGGCCGCA
GTATCCGATATCGAAGAGGAGGAAGAGCAGCCCGCTCTTAAGACCAAGGC
TAAGAAGGGCAAGGCCGCCAAGGAAGAAGAGCCATCCGACGACGAGGATG
CGTTTGACATGGACGTTTCAGACGATGAGGCCTTCGTTGACAGTGACGAG
GAACTGCCCTCTGACGTGGAACTCGGAGCGGCTGTTGAGCCTCCGAAGGA
TGACAAGCAATCCGACCGGAAGAAGCGGCGCAAGCTCAAGCATCTGCCCA
CATTTGCTTCGGCGGACGACTATGCGGCCCTGCTGGCCGGGGAGGACGAG
GGAACGTGAATTTGGAGCTTGTAGTTACTACCCTGATATGCTATCTATTG
CAGTATACCACAAAAGCATGCACATTGGTTCAAAAACATGAACATCACTC
CGTAGATGTAGTGAAACACAATAGGTCCCACCAAATACCCCTTACCTCAT
ACGTAGCAAGAGAGTAGTAGTCTAAGTATGTATGGCCCGGCCCGCCCTGA
TTTGAGTGCTTCCATTCCTTCCTTCTCCAGGTATTCTATCCCTTGCGCAA
GCAATATTCGACACAGCAACAGTGACCGGATCTAGTTTCCGAACCTTGCA
CCATGCAAAATACAACAGAGAGAACACATCCGTGCTGAAAATGCCATCAA
ATCGCACAATAAACACTCACAATCCCATACCGAACTACATGCTCGTACAG
CTAGCTATAACTCATAGCTAGCTGCCGATAAGCTTCCATCAAATCGTTTC
CGCTGTCAGAAGTGGCGTAAAAGCGGCGCCACTAAGACCAAGCCAGCCGT
CATACTAGATAGATAGGAGGACTAGTTCAGATCGTGGGACAGACACGACA
CGGACTGCGGCGTAAACTAGTGCGTGCCTTAGCGCCTGGCGTAAGGCGTA
TATGCCTCGAGAAGAGATTTTATCGGCTGAGTTGCCCTGTTGTAATTGAT
TGGACTTGAACCGGGTCATTCTATAGCCATGTCTCCTATCCTGGTAACGA
TAATGGAGAAGCAGGCTGCTCACTAACAAGTACCCAGCGACTCTACTTAT
CAGTGAAACCGGACGTAGGATATTATCGAATTCGCAAACACCGAAGCTAG
ATAGTAGACAAGCTACCTAAGATATCAAGAAAAAAAAAAGACTTAAA back to topCoding sequence (CDS) from alignment at ch8:2358334..2362730+ >KJC3_012029-T2 ID=KJC3_012029-T2|Name=KJC3_012029-T2|organism=Aspergillus niger KJC3|type=CDS|length=3948bp|location=Sequence derived from alignment at ch8:2358334..2362730+ (Aspergillus niger KJC3)
ATGGCCAAAAGTAAGGGGAAGCGCTCTTCCGGAGCAGACAACATCATCCC
CGACGGTGGTGTCGCTGTTAACGACTCCGCCCCCGGTGCTGATGCTCTTC
CACAACTCGAGGAAAGTGCATTTGCCGGCTTGCGACAGAAGATCGAACAG
CGACTGAAGGACCAGAGCGCCTCGAAGCAGAAGCCGAAGAACAACAAGGG
AAAGTCGGGTCCCAGTGATACGCCACAGAAGAAAGAGCCTGCACCCAAGC
CCGAGCCGAAGCAAGCGTCCAACAACGACAAGAACAACAAAGGCAAGAAG
CGGGACCGCAATGGTGAGGTGATCGCAAGGGAGGAGAAGGCTGTTTCGAA
AGATAAGAAGCCGGCATCGAAGGAGAACCAGGCCGATGTTTTGCGGCAAG
AGATTTTGGCCCTCGGAGGCACGGAGGAAGATTTGGATCTCATCGCCGGG
GTTGGTTCGGACTCTGAAGTTGAAGATGCTACAGAGAAGAAATCGAAGGG
CAAGTCCGACGATGCTTCTCTCCGGAAGGAACTTTCGAGTATTCTGGCTG
CCGCCGGTCAGGTTGTCCCTGACGACCTAGAGGACGAAGAGGTGGAGGAA
GAGGAAGCCGAGGAGGCAGAAGCAAGCGAGGAAGATGACGTCGAAGAGGA
TGAGGAGGAAGAAGCCGAGGATGATGAGGACGAGGAACCCTCAGAGGATG
AAGAGCCAGCTCCCGCCCCCGCCCCGAAGGAGACCAAAGAATCGGCCAAG
AAAGAGAAAGCCAACAAGGAACCCGCCGCCGAAGTCGTCTTCCCCAAGGA
GTTTTCCAAACTCGCTGTTCGACCCAGGTCCGATTGGTACATGACGGAAC
TGCCCTCGATACCGACAGCACAAGCAAAGTCGCTGCCTCGTCATGTGGTG
GATCGGTTCTACGATTACGCCGTCTCTCTGCTCGAGAAGGAAAACAAGAT
GTACGCGGAAGCGCAGCAAGCATCTGCCTCTTCATCCCACAAGTTCTACA
GCACGATCATGTCTACCGGTACACTTAGCGATAAGACTTCTGCCTTGACT
CTTGCTGTTCAAGAGTCGCCTCTTCACAACACCAAGGCATTGGGTGACCT
CATCGCCCTTGGAAAGAAGCGCAGTCGTGCTCAGGCCGTGGAAGTCTTGA
GATCGCTCAAGGATATGTTCGCTCAAGGAACGTTACTTCCTAGCGACAGG
AGACTCCGGGCTTTTGCCAACCAGCCGTCTCTTATTGCTGCGTTGCAAGG
CGCAGGCAGCAGGTGGTCCGAAGGAGACCCTCTCCCTGGAGGGCTTCAGA
AGAGCCACCTGATTGTTTGGGCTTATGAGCACTTCCTGAAGGATCAGTTT
TTCGAAGTCCTTAAGATCCTCGAAGTCTGGTGTAATGATGAGATTGAGTT
CTCTCGCTCCAGAGCTGTCAGCTACGTTTACGAACTACTCAAGGAGAAGC
CGGAGCAGGAAACGAACCTCCTGCGACTGTTGGTCAACAAGCTGGGAGAT
ACGTCGAAGAAGATTGCTTCGCGGGCATCCTACCTCCTGTTGCAACTTGA
ACAGGCCCACCCTCTGATGAAGCCCACCATCATCGCCGCTGTGGAGGAAG
TCCTTTTCCGTCCTGGTCAGAGTCAACATGCCAAATACTATGCTGTTATC
ACGCTGAACCAAACGGTCTTGAGTCTCAAGGAGGAGACCGTTGCATTGAA
GTTGCTTGACATCTATTTCTCGATTTTTGTTGCTCTCCTGCGGCCTAACA
AGGAGCCAAAGGGCAAGAAGAACGGAAAGTATGGCAACAAGCACAACAAG
AACAAGGGGAAGGAGGACTCTGATAAGAGTCTGGCTCAGACTGAAGAGGT
GCGGGATAAACTGACCTCTGCAGTCCTGACTGGTGTCAACCGAGCCTACC
CATTTACCAGCTCGGATAGTGAACGGTACGTTTCGCATGTCCTTAATTTC
TATACATCGCTAATCCGTCTTTAGATGGCCAAAAGTAAGGGGAAGCGCTC
TTCCGGAGCAGACAACATCATCCCCGACGGTGGTGTCGCTGTTAACGACT
CCGCCCCCGGTGCTGATGCTCTTCCACAACTCGAGGAAAGTGCATTTGCC
GGCTTGCGACAGAAGATCGAACAGCGACTGAAGGACCAGAGCGCCTCGAA
GCAGAAGCCGAAGAACAACAAGGGAAAGTCGGGTCCCAGTGATACGCCAC
AGAAGAAAGAGCCTGCACCCAAGCCCGAGCCGAAGCAAGCGTCCAACAAC
GACAAGAACAACAAAGGCAAGAAGCGGGACCGCAATGGTGAGGTGATCGC
AAGGGAGGAGAAGGCTGTTTCGAAAGATAAGAAGCCGGCATCGAAGGAGA
ACCAGGCCGATGTTTTGCGGCAAGAGATTTTGGCCCTCGGAGGCACGGAG
GAAGATTTGGATCTCATCGCCGGGGTTGGTTCGGACTCTGAAGTTGAAGA
TGCTACAGAGAAGAAATCGAAGGGCAAGTCCGACGATGCTTCTCTCCGGA
AGGAACTTTCGAGTATTCTGGCTGCCGCCGGTCAGGTTGTCCCTGACGAC
CTAGAGGACGAAGAGGTGGAGGAAGAGGAAGCCGAGGAGGCAGAAGCAAG
CGAGGAAGATGACGTCGAAGAGGATGAGGAGGAAGAAGCCGAGGATGATG
AGGACGAGGAACCCTCAGAGGATGAAGAGCCAGCTCCCGCCCCCGCCCCG
AAGGAGACCAAAGAATCGGCCAAGAAAGAGAAAGCCAACAAGGAACCCGC
CGCCGAAGTCGTCTTCCCCAAGGAGTTTTCCAAACTCGCTGTTCGACCCA
GGTCCGATTGGTACATGACGGAACTGCCCTCGATACCGACAGCACAAGCA
AAGTCGCTGCCTCGTCATGTGGTGGATCGGTTCTACGATTACGCCGTCTC
TCTGCTCGAGAAGGAAAACAAGATGTACGCGGAAGCGCAGCAAGCATCTG
CCTCTTCATCCCACAAGTTCTACAGCACGATCATGTCTACCGGTACACTT
AGCGATAAGACTTCTGCCTTGACTCTTGCTGTTCAAGAGTCGCCTCTTCA
CAACACCAAGGCATTGGGTGACCTCATCGCCCTTGGAAAGAAGCGCAGTC
GTGCTCAGGCCGTGGAAGTCTTGAGATCGCTCAAGGATATGTTCGCTCAA
GGAACGTTACTTCCTAGCGACAGGAGACTCCGGGCTTTTGCCAACCAGCC
GTCTCTTATTGCTGCGTTGCAAGGCGCAGGCAGCAGGTGGTCCGAAGGAG
ACCCTCTCCCTGGAGGGCTTCAGAAGAGCCACCTGATTGTTTGGGCTTAT
GAGCACTTCCTGAAGGATCAGTTTTTCGAAGTCCTTAAGATCCTCGAAGT
CTGGTGTAATGATGAGATTGAGTTCTCTCGCTCCAGAGCTGTCAGCTACG
TTTACGAACTACTCAAGGAGAAGCCGGAGCAGGAAACGAACCTCCTGCGA
CTGTTGGTCAACAAGCTGGGAGATACGTCGAAGAAGATTGCTTCGCGGGC
ATCCTACCTCCTGTTGCAACTTGAACAGGCCCACCCTCTGATGAAGCCCA
CCATCATCGCCGCTGTGGAGGAAGTCCTTTTCCGTCCTGGTCAGAGTCAA
CATGCCAAATACTATGCTGTTATCACGCTGAACCAAACGGTCTTGAGTCT
CAAGGAGGAGACCGTTGCATTGAAGTTGCTTGACATCTATTTCTCGATTT
TTGTTGCTCTCCTGCGGCCTAACAAGGAGCCAAAGGGCAAGAAGAACGGA
AAGTATGGCAACAAGCACAACAAGAACAAGGGGAAGGAGGACTCTGATAA
GAGTCTGGCTCAGACTGAAGAGGTGCGGGATAAACTGACCTCTGCAGTCC
TGACTGGTGTCAACCGAGCCTACCCATTTACCAGCTCGGATAGTGAACGG
TACGTTTCGCATGTCCTTAATTTCTATACATCGCTAATCCGTCTTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012029-T2.utr5p1 | KJC3_012029-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016024 |
| DBxref | PFAM:PF03914 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2358334..2362730 + |
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