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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2376373..2377290- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012034-T1 ID=KJC3_012034-T1|Name=KJC3_012034-T1|organism=Aspergillus niger KJC3|type=mRNA|length=918bp|location=Sequence derived from alignment at ch8:2376373..2377290- (Aspergillus niger KJC3)
TACTCTTACTGAGACTTGAGCTTCCCTCTTTATAATCTTCAATATTAGAT
CATATTTGTTTCATTTTTCTGGCTGAGTGTGTTCTTCCACTTCTAGCCTC
TGCGCCGTCTATTTCTGAACATACTTTCTGTCTTGTTGCCGGTTTTCTGG
CTGAGTATAGTATATTGCGTCATGGTATGAGTGTAACCACTGACTCCCGT
TTGAGTTGAGAGTAACAGATAGCAGGGCGGACTTAAGGAAGACATAGCAT
TTGACCCGCCTTGCCATCCACGAGCTGTAGGTCACAGACAGAACATTCTT
TTGGTGCATGACTGACAATTGCCAGTGTGCCATACAAGGTGATTACCACC
ATACAACATCCAGGTGCAGAAATGTCACTGATTCTTGCAGCATGTCTCAC
GAAGAACTCGTACCAGGAGGAGAAATGCCAGTCCCAGATCAATGCCCTCT
ATGAGTGCTGTAATGCCTTCTACAAGGCGCGAGGAGAGGACGCAAAGACT
CCAAGCTGTCCCAAGCCCAACTTGCTGCGTCTGAAGATGAAGCAACGGGG
CATGGAGCCTTAGCTTGCATTGGTAAGGGTTTTCGTGTCTTAACAGAGAT
CTACGGATCGTTGTACATACTACCATTCATACTTTCGTCGTCCATAGAGT
AGAGACCAATTCATCAAGGTCCTTAGAACGTGTCCGGTCGTTGCCGAAAG
ACAGTGGCAGTGATAGTCTTAGTAGTCAGTCCATCTCAGATAAATCTGAA
GCTGGAATGTGACAATTCCCTTGCAGTCTGAGCTCCCATGCTGAGTAAAG
AGCTAGGCTAGTTGTGAAAATTGCCAAATTTCTCTAAGACAATCTTGAGC
ACGCAAAGAGGCCGATTGACCTGAACGAAGATTGAAGCGCTCGTTCCGAG
ACTCTAATGATTGCCTAT back to topCoding sequence (CDS) from alignment at ch8:2376373..2377290- >KJC3_012034-T1 ID=KJC3_012034-T1|Name=KJC3_012034-T1|organism=Aspergillus niger KJC3|type=CDS|length=960bp|location=Sequence derived from alignment at ch8:2376373..2377290- (Aspergillus niger KJC3)
CATGTCTCACGAAGAACTCGTACCAGGAGGAGAAATGCCAGTCCCAGATC
AATGCCCTCTATGAGTGCTGTAATGCCTTCTACAAGGCGCGAGGAGAGGA
CGCAAAGACTCCAAGCTGTCCCAAGCCCAACTTGCTGCGTCTGAAGATGA
AGCAACGGGGCATGGAGCCTTAGTGTGCCATACAAGGGCGGACTTAAGGA
AGACATAGCATTTGACCCGCCTTGCCATCCACGAGCTATGCATGTCTCAC
GAAGAACTCGTACCAGGAGGAGAAATGCCAGTCCCAGATCAATGCCCTCT
ATGAGTGCTGTAATGCCTTCTACAAGGCGCGAGGAGAGGACGCAAAGACT
CCAAGCTGTCCCAAGCCCAACTTGCTGCGTCTGAAGATGAAGCAACGGGG
CATGGAGCCTTAGTGTGCCATACAAGGGCGGACTTAAGGAAGACATAGCA
TTTGACCCGCCTTGCCATCCACGAGCTATGCATGTCTCACGAAGAACTCG
TACCAGGAGGAGAAATGCCAGTCCCAGATCAATGCCCTCTATGAGTGCTG
TAATGCCTTCTACAAGGCGCGAGGAGAGGACGCAAAGACTCCAAGCTGTC
CCAAGCCCAACTTGCTGCGTCTGAAGATGAAGCAACGGGGCATGGAGCCT
TAGTGTGCCATACAAGGGCGGACTTAAGGAAGACATAGCATTTGACCCGC
CTTGCCATCCACGAGCTATGCATGTCTCACGAAGAACTCGTACCAGGAGG
AGAAATGCCAGTCCCAGATCAATGCCCTCTATGAGTGCTGTAATGCCTTC
TACAAGGCGCGAGGAGAGGACGCAAAGACTCCAAGCTGTCCCAAGCCCAA
CTTGCTGCGTCTGAAGATGAAGCAACGGGGCATGGAGCCTTAGTGTGCCA
TACAAGGGCGGACTTAAGGAAGACATAGCATTTGACCCGCCTTGCCATCC
ACGAGCTATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012034-T1.utr3p1 | KJC3_012034-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012034-T1.utr5p1 | KJC3_012034-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009069 |
| DBxref | InterPro:IPR027179 |
| DBxref | PFAM:PF08991 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2376373..2377290 - |
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