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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2388462..2389742- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012041-T1 ID=KJC3_012041-T1|Name=KJC3_012041-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1281bp|location=Sequence derived from alignment at ch8:2388462..2389742- (Aspergillus niger KJC3)
ATGGCTCAGAGCATCACTATCGACCCCAGTAACCTTCAACCCCCGACGAG
ACATCCTACGTCCTCCATCGACCCTGCATCAGAGCTGCCTCCGGCCAAAG
AAAGCAGGGTCCATCCCTCCAAACCAGGCGAGGAGAATGCATCGATATAC
TTTGTTGGCACTGCCACGACGATCATGCGCGTGATTCCTCTCTAGGTAAC
GAGATCAAGCCAAGAACTAACGAGCAATACAGACAATGGCATGGGATCCG
CATTATGACTGATGTATGTACCACCATGCACCTTGCCCAGGGAGTCTAGA
CAGAAGCAATAATATCGTTAGCATGCTAACTGACAAGATCAGCCCAACTT
CCTTCACGCAGGGGACCACGTCCACCTCGGTCCTGGAGTATCCTCGACTC
GAAGAACGAATCCGGCTGTAGATCTAGAAGAGCTACCGCGGATCGACTTG
GTGCTTCTTTCTCATTATCACGGGTAGGTATGACGTTTAACTCATTGGAG
TGAAGAAAGACTGGCTAACGAGGGAAATTGTAGAGATCACTTCGATCGAA
AAGTCGAAGCCTCCTTGCGCCGCGACCTTCCCATCGTTACGACACCTCAT
GCTAAATCCATCTTAACTTCTAAAGGGGATGATTCGTTCACGAGAGTATC
CAGCGTGGACGTCTACGAGCAGCTTACAGTCGATATCAAACCCGACCAGA
ATGACGCACAGCGACAGCAACGGCCCAAGCTCCGGATAACCGGTATGCCA
GGGAAACATATCCCGGTTGGAAAGCCGTTAGAGAAGCTGAATGAGCTGGT
AGGGGCGGTATGTTCCTTCCTCCACATATAGTCCAGCCAGACACTGATGC
GTACGCTGGAATAGATCCCTCCTACAAACGGATGGATGCTCGAGCTAGGT
TACGGCGACGCAAACAGTTTCACCTCCGGGTACAGAATCTACATCTCAGG
GGACACGCTCATGTTCGATGACCTCAAAGAGATTCCGCGTCGGTATGCAG
GACAACCGATCGGCCTGATGCTGGTTCATCTAGGTGGCACAACGGTACCC
TCGCCGGCCATGTTGCCATTGGCGATGATGGTAACCATGGACGCGAAACA
GGGAGTGGAACTGATAAAGTTGATTCGACCACAGGTGACCATCCCCATTC
ATTATGATGATTATGACGTGTTTGCAAGTTCGTTGGATGATTTTCGGGCG
CAAGTGCAGGCTGCTGGGTTGGATGGGGAGGTTGTGTATCTGGACCGGGG
AGAGGAGTATCAGTTTCGCGTCGTAGAATAA back to topCoding sequence (CDS) from alignment at ch8:2388462..2389742- >KJC3_012041-T1 ID=KJC3_012041-T1|Name=KJC3_012041-T1|organism=Aspergillus niger KJC3|type=CDS|length=5145bp|location=Sequence derived from alignment at ch8:2388462..2389742- (Aspergillus niger KJC3)
ATCCCTCCTACAAACGGATGGATGCTCGAGCTAGGTTACGGCGACGCAAA
CAGTTTCACCTCCGGGTACAGAATCTACATCTCAGGGGACACGCTCATGT
TCGATGACCTCAAAGAGATTCCGCGTCGGTATGCAGGACAACCGATCGGC
CTGATGCTGGTTCATCTAGGTGGCACAACGGTACCCTCGCCGGCCATGTT
GCCATTGGCGATGATGGTAACCATGGACGCGAAACAGGGAGTGGAACTGA
TAAAGTTGATTCGACCACAGGTGACCATCCCCATTCATTATGATGATTAT
GACGTGTTTGCAAGTTCGTTGGATGATTTTCGGGCGCAAGTGCAGGCTGC
TGGGTTGGATGGGGAGGTTGTGTATCTGGACCGGGGAGAGGAGTATCAGT
TTCGCGTCGTAGAATAAAGATCACTTCGATCGAAAAGTCGAAGCCTCCTT
GCGCCGCGACCTTCCCATCGTTACGACACCTCATGCTAAATCCATCTTAA
CTTCTAAAGGGGATGATTCGTTCACGAGAGTATCCAGCGTGGACGTCTAC
GAGCAGCTTACAGTCGATATCAAACCCGACCAGAATGACGCACAGCGACA
GCAACGGCCCAAGCTCCGGATAACCGGTATGCCAGGGAAACATATCCCGG
TTGGAAAGCCGTTAGAGAAGCTGAATGAGCTGGTAGGGGCGCCCAACTTC
CTTCACGCAGGGGACCACGTCCACCTCGGTCCTGGAGTATCCTCGACTCG
AAGAACGAATCCGGCTGTAGATCTAGAAGAGCTACCGCGGATCGACTTGG
TGCTTCTTTCTCATTATCACGGACAATGGCATGGGATCCGCATTATGACT
GATATGGCTCAGAGCATCACTATCGACCCCAGTAACCTTCAACCCCCGAC
GAGACATCCTACGTCCTCCATCGACCCTGCATCAGAGCTGCCTCCGGCCA
AAGAAAGCAGGGTCCATCCCTCCAAACCAGGCGAGGAGAATGCATCGATA
TACTTTGTTGGCACTGCCACGACGATCATATCCCTCCTACAAACGGATGG
ATGCTCGAGCTAGGTTACGGCGACGCAAACAGTTTCACCTCCGGGTACAG
AATCTACATCTCAGGGGACACGCTCATGTTCGATGACCTCAAAGAGATTC
CGCGTCGGTATGCAGGACAACCGATCGGCCTGATGCTGGTTCATCTAGGT
GGCACAACGGTACCCTCGCCGGCCATGTTGCCATTGGCGATGATGGTAAC
CATGGACGCGAAACAGGGAGTGGAACTGATAAAGTTGATTCGACCACAGG
TGACCATCCCCATTCATTATGATGATTATGACGTGTTTGCAAGTTCGTTG
GATGATTTTCGGGCGCAAGTGCAGGCTGCTGGGTTGGATGGGGAGGTTGT
GTATCTGGACCGGGGAGAGGAGTATCAGTTTCGCGTCGTAGAATAAAGAT
CACTTCGATCGAAAAGTCGAAGCCTCCTTGCGCCGCGACCTTCCCATCGT
TACGACACCTCATGCTAAATCCATCTTAACTTCTAAAGGGGATGATTCGT
TCACGAGAGTATCCAGCGTGGACGTCTACGAGCAGCTTACAGTCGATATC
AAACCCGACCAGAATGACGCACAGCGACAGCAACGGCCCAAGCTCCGGAT
AACCGGTATGCCAGGGAAACATATCCCGGTTGGAAAGCCGTTAGAGAAGC
TGAATGAGCTGGTAGGGGCGCCCAACTTCCTTCACGCAGGGGACCACGTC
CACCTCGGTCCTGGAGTATCCTCGACTCGAAGAACGAATCCGGCTGTAGA
TCTAGAAGAGCTACCGCGGATCGACTTGGTGCTTCTTTCTCATTATCACG
GACAATGGCATGGGATCCGCATTATGACTGATATGGCTCAGAGCATCACT
ATCGACCCCAGTAACCTTCAACCCCCGACGAGACATCCTACGTCCTCCAT
CGACCCTGCATCAGAGCTGCCTCCGGCCAAAGAAAGCAGGGTCCATCCCT
CCAAACCAGGCGAGGAGAATGCATCGATATACTTTGTTGGCACTGCCACG
ACGATCATATCCCTCCTACAAACGGATGGATGCTCGAGCTAGGTTACGGC
GACGCAAACAGTTTCACCTCCGGGTACAGAATCTACATCTCAGGGGACAC
GCTCATGTTCGATGACCTCAAAGAGATTCCGCGTCGGTATGCAGGACAAC
CGATCGGCCTGATGCTGGTTCATCTAGGTGGCACAACGGTACCCTCGCCG
GCCATGTTGCCATTGGCGATGATGGTAACCATGGACGCGAAACAGGGAGT
GGAACTGATAAAGTTGATTCGACCACAGGTGACCATCCCCATTCATTATG
ATGATTATGACGTGTTTGCAAGTTCGTTGGATGATTTTCGGGCGCAAGTG
CAGGCTGCTGGGTTGGATGGGGAGGTTGTGTATCTGGACCGGGGAGAGGA
GTATCAGTTTCGCGTCGTAGAATAAAGATCACTTCGATCGAAAAGTCGAA
GCCTCCTTGCGCCGCGACCTTCCCATCGTTACGACACCTCATGCTAAATC
CATCTTAACTTCTAAAGGGGATGATTCGTTCACGAGAGTATCCAGCGTGG
ACGTCTACGAGCAGCTTACAGTCGATATCAAACCCGACCAGAATGACGCA
CAGCGACAGCAACGGCCCAAGCTCCGGATAACCGGTATGCCAGGGAAACA
TATCCCGGTTGGAAAGCCGTTAGAGAAGCTGAATGAGCTGGTAGGGGCGC
CCAACTTCCTTCACGCAGGGGACCACGTCCACCTCGGTCCTGGAGTATCC
TCGACTCGAAGAACGAATCCGGCTGTAGATCTAGAAGAGCTACCGCGGAT
CGACTTGGTGCTTCTTTCTCATTATCACGGACAATGGCATGGGATCCGCA
TTATGACTGATATGGCTCAGAGCATCACTATCGACCCCAGTAACCTTCAA
CCCCCGACGAGACATCCTACGTCCTCCATCGACCCTGCATCAGAGCTGCC
TCCGGCCAAAGAAAGCAGGGTCCATCCCTCCAAACCAGGCGAGGAGAATG
CATCGATATACTTTGTTGGCACTGCCACGACGATCATATCCCTCCTACAA
ACGGATGGATGCTCGAGCTAGGTTACGGCGACGCAAACAGTTTCACCTCC
GGGTACAGAATCTACATCTCAGGGGACACGCTCATGTTCGATGACCTCAA
AGAGATTCCGCGTCGGTATGCAGGACAACCGATCGGCCTGATGCTGGTTC
ATCTAGGTGGCACAACGGTACCCTCGCCGGCCATGTTGCCATTGGCGATG
ATGGTAACCATGGACGCGAAACAGGGAGTGGAACTGATAAAGTTGATTCG
ACCACAGGTGACCATCCCCATTCATTATGATGATTATGACGTGTTTGCAA
GTTCGTTGGATGATTTTCGGGCGCAAGTGCAGGCTGCTGGGTTGGATGGG
GAGGTTGTGTATCTGGACCGGGGAGAGGAGTATCAGTTTCGCGTCGTAGA
ATAAAGATCACTTCGATCGAAAAGTCGAAGCCTCCTTGCGCCGCGACCTT
CCCATCGTTACGACACCTCATGCTAAATCCATCTTAACTTCTAAAGGGGA
TGATTCGTTCACGAGAGTATCCAGCGTGGACGTCTACGAGCAGCTTACAG
TCGATATCAAACCCGACCAGAATGACGCACAGCGACAGCAACGGCCCAAG
CTCCGGATAACCGGTATGCCAGGGAAACATATCCCGGTTGGAAAGCCGTT
AGAGAAGCTGAATGAGCTGGTAGGGGCGCCCAACTTCCTTCACGCAGGGG
ACCACGTCCACCTCGGTCCTGGAGTATCCTCGACTCGAAGAACGAATCCG
GCTGTAGATCTAGAAGAGCTACCGCGGATCGACTTGGTGCTTCTTTCTCA
TTATCACGGACAATGGCATGGGATCCGCATTATGACTGATATGGCTCAGA
GCATCACTATCGACCCCAGTAACCTTCAACCCCCGACGAGACATCCTACG
TCCTCCATCGACCCTGCATCAGAGCTGCCTCCGGCCAAAGAAAGCAGGGT
CCATCCCTCCAAACCAGGCGAGGAGAATGCATCGATATACTTTGTTGGCA
CTGCCACGACGATCATATCCCTCCTACAAACGGATGGATGCTCGAGCTAG
GTTACGGCGACGCAAACAGTTTCACCTCCGGGTACAGAATCTACATCTCA
GGGGACACGCTCATGTTCGATGACCTCAAAGAGATTCCGCGTCGGTATGC
AGGACAACCGATCGGCCTGATGCTGGTTCATCTAGGTGGCACAACGGTAC
CCTCGCCGGCCATGTTGCCATTGGCGATGATGGTAACCATGGACGCGAAA
CAGGGAGTGGAACTGATAAAGTTGATTCGACCACAGGTGACCATCCCCAT
TCATTATGATGATTATGACGTGTTTGCAAGTTCGTTGGATGATTTTCGGG
CGCAAGTGCAGGCTGCTGGGTTGGATGGGGAGGTTGTGTATCTGGACCGG
GGAGAGGAGTATCAGTTTCGCGTCGTAGAATAAAGATCACTTCGATCGAA
AAGTCGAAGCCTCCTTGCGCCGCGACCTTCCCATCGTTACGACACCTCAT
GCTAAATCCATCTTAACTTCTAAAGGGGATGATTCGTTCACGAGAGTATC
CAGCGTGGACGTCTACGAGCAGCTTACAGTCGATATCAAACCCGACCAGA
ATGACGCACAGCGACAGCAACGGCCCAAGCTCCGGATAACCGGTATGCCA
GGGAAACATATCCCGGTTGGAAAGCCGTTAGAGAAGCTGAATGAGCTGGT
AGGGGCGCCCAACTTCCTTCACGCAGGGGACCACGTCCACCTCGGTCCTG
GAGTATCCTCGACTCGAAGAACGAATCCGGCTGTAGATCTAGAAGAGCTA
CCGCGGATCGACTTGGTGCTTCTTTCTCATTATCACGGACAATGGCATGG
GATCCGCATTATGACTGATATGGCTCAGAGCATCACTATCGACCCCAGTA
ACCTTCAACCCCCGACGAGACATCCTACGTCCTCCATCGACCCTGCATCA
GAGCTGCCTCCGGCCAAAGAAAGCAGGGTCCATCCCTCCAAACCAGGCGA
GGAGAATGCATCGATATACTTTGTTGGCACTGCCACGACGATCAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036866 |
| DBxref | InterPro:IPR001279 |
| DBxref | PFAM:PF13483 |
| DBxref | PFAM:PF12706 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch8 | supercontig | ch8:2388462..2389742 - |
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