|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2395240..2397196- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012044-T1 ID=KJC3_012044-T1|Name=KJC3_012044-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1957bp|location=Sequence derived from alignment at ch8:2395240..2397196- (Aspergillus niger KJC3) TCCTTCTTCTCTCGCAGCAATTGCTCATCATGTCTGCTGTACGTCCCGTG
AGAAAAGGTCTTCACCTTTTGGGCTCGAGCTCGCTCGCCCGCCCCGCCTC
TGTCGCTGTCAATGGCGCATCTCTGCTCCCGCGGCAGCTGGCAGCTTCTC
CGCGCGCTCTCCGCCCCGCGGCCAGCTCCATTCCTGCTGCTCGTCCACTT
CCCCGGGTGACTTCGCTGTCTGCTCAAGGAGGTGTCCGATATGCCTCGTC
TGTAGCTCCTTCAGGTCCAGTGAAGAAGACTCAGCTGTATGACCTTCACT
TGGCCCGGGGTGCCAAAATGGTCCCCTTTGCGGGGTTCTCCATGCCCCTG
CAGTATTCCGACCTCAGTCATGTTGAGAGCCACAAGTGGACTCGGGAAAA
GGCCAGTCTTTTCGACGTGAGCCATATGTGCGTATACCTCTCTTCGTGAA
GTGCCCAGAGTCTCGTTAATTGACCATCTACAGGGTTCAACATCAGCTCA
GCGGTCCCGGCGCTCTCGACCTCCTCATGAAGGTCACCCCCTCATCCCTC
GACAAGCTCAAGCATAACCAATCCACTCTCTCTTGTCTCCTGGAGGATGG
AACTGGCGGCATTATCGATGACACCGTCATCACTCGTCGTACCGATGACA
CCTTCTACTTCGTGACCAACGCCGGTCGTCGCACCGAGGACCTGGCCTTC
CTGCAAGCCGAAATCGACACCTACAAGCAAGCCCACGGGCCCGACAGCCT
GAAGTGGGAGATCCTCGAGGACCGCGCCCTAGTCGCTCTCCAAGGTCCTA
AGGCTGCCTCCGTCCTCCAATCCCTCGTCACCCCCGACGGTGCCAACTCA
GATCTCTCCACCCTCTACTTCGGTAACTGCCGAGAGCTGCACCTCACCTT
CCCCGACGGCACCACCACCCCGCAGCCCCTTCTCGTCTCCCGAACCGGCT
ACACCGGCGAAGATGGCTTTGAGATCTCCATCCCCACTGCCAGCGACGCC
ACCCTACCTGTCCGCGTTACCGAGCTCTTCCTCTCCAACCCCGACGAAGT
CCGTCTCGCCGGTCTCGCCGCGCGCGACTCCCTCCGTCTCGAAGCCGGAA
TGTGTCTCTATGGAAGCGACATTTCCACCTCTCAAACTCCTCCCGGCGCC
TCCCTGACCTGGCTCGTAGGCAAGGAGCGTCGTGACCCTGCCACCGCCAA
CTTCAACGGCGCCTCCACCATCCTCCCCCAGGTTGCCTCCCCCAAGACCC
TCTCCCAGCGCCGTGTCGGATTCACCGTTGAGAAGGGCTCCCCTGCCCGT
GAGGGCGCCATCATTGTCGATCTGAACGATGAGTCCCGCACCCAGATCGG
TGTCATTACCTCTGGCCTTCCTAGCCCTACCCTGGGCGGCACTAACATTG
CCATGGGCTACATCAAGAACGGCCTGCATAAGAAGGGCACCGAGGTTGGC
GTCTTGGTGAGGAACAAGCTCCGCAAGGCTACGGTTACGGGTATGCCTTG
GGTTGAGAGCAAGTTCTATCGTCCCAAGGCTTAGGCTTAGTCTATCTTTT
GGTCGATATTTCTTGGCTTGGATGTGGATGGATGGGGCAATAGGAGTGGG
TGTTTGGCTTGGTTTCAACAATAGATTCCCCTGATGACGATTCTTGATGT
TTGATGTTTGACGTCATTGTTTGTACATAGATTCTGATGATTCATCTTTT
TTCAACTTTTTTCTTTGGTTCCTTTTGGGACCAGCAATGGGTTCAACCCT
GTCGTGATGGCTGCTTCGTTTATCAGCAAAGGCCAGAATGTGTCCGATGG
TACAAGCATGGTTAATGATATCTGGTACATTCATAAAAAAGTTCCAATAT
TCCCGATTAGGTACTGTGCAACACGTTATTCTGTCTTGCTTCTTCTAGGT
AGCAGGACGTTATGTACGTATGAATAGTGATGCAAAACACGAAGTTTCCC
ATTTTAT back to topCoding sequence (CDS) from alignment at ch8:2395240..2397196- >KJC3_012044-T1 ID=KJC3_012044-T1|Name=KJC3_012044-T1|organism=Aspergillus niger KJC3|type=CDS|length=2898bp|location=Sequence derived from alignment at ch8:2395240..2397196- (Aspergillus niger KJC3) GGTTCAACATCAGCTCAGCGGTCCCGGCGCTCTCGACCTCCTCATGAAGG TCACCCCCTCATCCCTCGACAAGCTCAAGCATAACCAATCCACTCTCTCT TGTCTCCTGGAGGATGGAACTGGCGGCATTATCGATGACACCGTCATCAC TCGTCGTACCGATGACACCTTCTACTTCGTGACCAACGCCGGTCGTCGCA CCGAGGACCTGGCCTTCCTGCAAGCCGAAATCGACACCTACAAGCAAGCC CACGGGCCCGACAGCCTGAAGTGGGAGATCCTCGAGGACCGCGCCCTAGT CGCTCTCCAAGGTCCTAAGGCTGCCTCCGTCCTCCAATCCCTCGTCACCC CCGACGGTGCCAACTCAGATCTCTCCACCCTCTACTTCGGTAACTGCCGA GAGCTGCACCTCACCTTCCCCGACGGCACCACCACCCCGCAGCCCCTTCT CGTCTCCCGAACCGGCTACACCGGCGAAGATGGCTTTGAGATCTCCATCC CCACTGCCAGCGACGCCACCCTACCTGTCCGCGTTACCGAGCTCTTCCTC TCCAACCCCGACGAAGTCCGTCTCGCCGGTCTCGCCGCGCGCGACTCCCT CCGTCTCGAAGCCGGAATGTGTCTCTATGGAAGCGACATTTCCACCTCTC AAACTCCTCCCGGCGCCTCCCTGACCTGGCTCGTAGGCAAGGAGCGTCGT GACCCTGCCACCGCCAACTTCAACGGCGCCTCCACCATCCTCCCCCAGGT TGCCTCCCCCAAGACCCTCTCCCAGCGCCGTGTCGGATTCACCGTTGAGA AGGGCTCCCCTGCCCGTGAGGGCGCCATCATTGTCGATCTGAACGATGAG TCCCGCACCCAGATCGGTGTCATTACCTCTGGCCTTCCTAGCCCTACCCT GGGCGGCACTAACATTGCCATGGGCTACATCAAGAACGGCCTGCATAAGA AGGGCACCGAGGTTGGCGTCTTGGTGAGGAACAAGCTCCGCAAGGCTACG GTTACGGGTATGCCTTGGGTTGAGAGCAAGTTCTATCGTCCCAAGGCTTA GATGTCTGCTGTACGTCCCGTGAGAAAAGGTCTTCACCTTTTGGGCTCGA GCTCGCTCGCCCGCCCCGCCTCTGTCGCTGTCAATGGCGCATCTCTGCTC CCGCGGCAGCTGGCAGCTTCTCCGCGCGCTCTCCGCCCCGCGGCCAGCTC CATTCCTGCTGCTCGTCCACTTCCCCGGGTGACTTCGCTGTCTGCTCAAG GAGGTGTCCGATATGCCTCGTCTGTAGCTCCTTCAGGTCCAGTGAAGAAG ACTCAGCTGTATGACCTTCACTTGGCCCGGGGTGCCAAAATGGTCCCCTT TGCGGGGTTCTCCATGCCCCTGCAGTATTCCGACCTCAGTCATGTTGAGA GCCACAAGTGGACTCGGGAAAAGGCCAGTCTTTTCGACGTGAGCCATATG GTTCAACATCAGCTCAGCGGTCCCGGCGCTCTCGACCTCCTCATGAAGGT CACCCCCTCATCCCTCGACAAGCTCAAGCATAACCAATCCACTCTCTCTT GTCTCCTGGAGGATGGAACTGGCGGCATTATCGATGACACCGTCATCACT CGTCGTACCGATGACACCTTCTACTTCGTGACCAACGCCGGTCGTCGCAC CGAGGACCTGGCCTTCCTGCAAGCCGAAATCGACACCTACAAGCAAGCCC ACGGGCCCGACAGCCTGAAGTGGGAGATCCTCGAGGACCGCGCCCTAGTC GCTCTCCAAGGTCCTAAGGCTGCCTCCGTCCTCCAATCCCTCGTCACCCC CGACGGTGCCAACTCAGATCTCTCCACCCTCTACTTCGGTAACTGCCGAG AGCTGCACCTCACCTTCCCCGACGGCACCACCACCCCGCAGCCCCTTCTC GTCTCCCGAACCGGCTACACCGGCGAAGATGGCTTTGAGATCTCCATCCC CACTGCCAGCGACGCCACCCTACCTGTCCGCGTTACCGAGCTCTTCCTCT CCAACCCCGACGAAGTCCGTCTCGCCGGTCTCGCCGCGCGCGACTCCCTC CGTCTCGAAGCCGGAATGTGTCTCTATGGAAGCGACATTTCCACCTCTCA AACTCCTCCCGGCGCCTCCCTGACCTGGCTCGTAGGCAAGGAGCGTCGTG ACCCTGCCACCGCCAACTTCAACGGCGCCTCCACCATCCTCCCCCAGGTT GCCTCCCCCAAGACCCTCTCCCAGCGCCGTGTCGGATTCACCGTTGAGAA GGGCTCCCCTGCCCGTGAGGGCGCCATCATTGTCGATCTGAACGATGAGT CCCGCACCCAGATCGGTGTCATTACCTCTGGCCTTCCTAGCCCTACCCTG GGCGGCACTAACATTGCCATGGGCTACATCAAGAACGGCCTGCATAAGAA GGGCACCGAGGTTGGCGTCTTGGTGAGGAACAAGCTCCGCAAGGCTACGG TTACGGGTATGCCTTGGGTTGAGAGCAAGTTCTATCGTCCCAAGGCTTAG ATGTCTGCTGTACGTCCCGTGAGAAAAGGTCTTCACCTTTTGGGCTCGAG CTCGCTCGCCCGCCCCGCCTCTGTCGCTGTCAATGGCGCATCTCTGCTCC CGCGGCAGCTGGCAGCTTCTCCGCGCGCTCTCCGCCCCGCGGCCAGCTCC ATTCCTGCTGCTCGTCCACTTCCCCGGGTGACTTCGCTGTCTGCTCAAGG AGGTGTCCGATATGCCTCGTCTGTAGCTCCTTCAGGTCCAGTGAAGAAGA CTCAGCTGTATGACCTTCACTTGGCCCGGGGTGCCAAAATGGTCCCCTTT GCGGGGTTCTCCATGCCCCTGCAGTATTCCGACCTCAGTCATGTTGAGAG CCACAAGTGGACTCGGGAAAAGGCCAGTCTTTTCGACGTGAGCCATAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0006546 | glycine catabolic process |
Vocabulary: Molecular Function
Term | Definition |
GO:0004047 | aminomethyltransferase activity |
GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_012044-T1.utr3p1 | KJC3_012044-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_012044-T1.utr5p1 | KJC3_012044-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
Note | BUSCO:EOG09263J6Z |
DBxref | InterPro:IPR029043 |
DBxref | InterPro:IPR006223 |
DBxref | InterPro:IPR028896 |
DBxref | InterPro:IPR013977 |
DBxref | InterPro:IPR006222 |
DBxref | InterPro:IPR027266 |
DBxref | PFAM:PF08669 |
DBxref | PFAM:PF01571 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:2395240..2397196 - |
|