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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2415519..2417282+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012048-T1 ID=KJC3_012048-T1|Name=KJC3_012048-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1764bp|location=Sequence derived from alignment at ch8:2415519..2417282+ (Aspergillus niger KJC3)
ATGGACTCTGACCTAGAAAAAAGACAGAGATCCCCTTCCTTGCGGAGTGT
GACACGAGAGCAGCTAGAGACTTCACAAGCTCTGGGATCACCCCCTCCAA
CATGTGGATCGAGATACGAAAGATGGGCGAGAAACATCAAAGGCTTAGAG
GCTCGCGGGATCGAGCCCGTGTCTCTTGAAGAACGACTGAAGAACACCAG
CTCGACCCCTTTCCGAATGATGCTCACGTGGTTCAGTATGGGCATGGCAA
TCAACAATATTGTGACCGGATCTTTGGGAACACTGGTCATGAAGCTTAGC
TTCACCGACGCCGCGCTGTGTGTCATCTTCGGTACGCTCCTGGGAGGTCT
GGGAGTTGGATACATGAGCACATGGGGTCCCAGAAGCGGTAACCGCACAC
TTGTATGGCCTACACTTGCACCTTGGTTTTCTTCTCTCGCCCTTCCCATC
TGCACTTAGCCATTTGCGTGATTTAAAAGATCCTGGCTCACAACCATATT
CTCCTGATAGATCGTGTCTCGGTACTTCATGGGATATTACCCTAGTAAGG
TCTGTTGTATACTGAATGTGCTGACCAACTTGGGAACCGGCATGATGAGT
GCCACTGTAGGAGGACAGTTGCTTTCCAAGCTATCAGGAGGAGTCGTATC
CGTCATAGTTGGTATAGTAATAGTTGCCTTGGTGAGCTGGGCAATGGCTA
CCTTTGGGATGAAGATATTCCAGTTCTATGAGAGGTATGGCTCGTCACCC
TTCCATGTTTCAGAGCACTATCCTGACCATCAATTCTGGCATAGATATGC
TTGGTTTCCGCAATTGTTGATCTTTTCCGTTCTCACCGGCTCGGCTGGAC
CGCAATTCGATTTCCATAGCCCGACGATTGGTTCTATCGAGCAGATCAAC
GCAAAGCGTCTAACATACTTCTCACTTTGCCTATCTATTCCCTTGTCATG
GATACCCGTATCCGCAGACTACCAGGTTTACTATTCTCCGGAGATCAGGC
GATGGAAGATATGGACAGTGACCACGATCGGTGTAAGCCTCTCGATCGCC
ATAACGCTTCTTCTTGGCGCCGGGCTTGGAAGCGGTGTTGCAATCAACTC
TAAATGGGCGTCTCTTTATGACGGTACGCCGGGGAGTCTGCTGATGGCCG
GCTATGATCGGCTGGGACCTCTCGGAAAGCTATGCGCCTTCATCAATGTC
TTAACAATTGTGTCCAACAATGCCCCCAGCTCGTACTCAACCGGATTGAA
TTTCCAGATGCTGGGAGAGATGTGGCTCAGAGTTCCACGACCTGTTTTCA
CGACTGTCAGTACTCTGATTTACGCATCATGTGCCATCGGAGGCCGAAAC
TCTTTGTATGAGATATTCGGGAATCTCATGCCGCTCATTGGATACTGGGT
CATTATCTGGTTTACCATTGTGGTAGAACAAGACGTACTTTTCAACCGAG
GGAAAGTTTACGACTGGACTGATTGGAACAATTGGCTTAAGCTCCCGGTT
GGAGTGGCAGCTAGCACTGCCTTTTTGATCGGTTGGGTAGGAGCCATCGT
TGGCATGGTACGCAGTCCCACTAGCATGTGCTTGTTGCACGAATTGCTGC
TAACCAAGGTACCTTTTGTCTGGTAGAATCAAGCCTATTATATTGGCCCA
GTCTCCAGAGCGATCCCAGGTGGGTGTGATCTGGGCATCTGGCTGGGGTT
GGGCTTCACGGCTCTTGCATTTCCGCCATTCAGAATGCTGGAGCTGAAAA
TAATTGGCCGTTGA back to topCoding sequence (CDS) from alignment at ch8:2415519..2417282+ >KJC3_012048-T1 ID=KJC3_012048-T1|Name=KJC3_012048-T1|organism=Aspergillus niger KJC3|type=CDS|length=6108bp|location=Sequence derived from alignment at ch8:2415519..2417282+ (Aspergillus niger KJC3)
ATGGACTCTGACCTAGAAAAAAGACAGAGATCCCCTTCCTTGCGGAGTGT
GACACGAGAGCAGCTAGAGACTTCACAAGCTCTGGGATCACCCCCTCCAA
CATGTGGATCGAGATACGAAAGATGGGCGAGAAACATCAAAGGCTTAGAG
GCTCGCGGGATCGAGCCCGTGTCTCTTGAAGAACGACTGAAGAACACCAG
CTCGACCCCTTTCCGAATGATGCTCACGTGGTTCAGTATGGGCATGGCAA
TCAACAATATTGTGACCGGATCTTTGGGAACACTGGTCATGAAGCTTAGC
TTCACCGACGCCGCGCTGTGTGTCATCTTCGGTACGCTCCTGGGAGGTCT
GGGAGTTGGATACATGAGCACATGGGGTCCCAGAAGCGGTAACCGCACAC
TTATCGTGTCTCGGTACTTCATGGGATATTACCCTAGTAAGGTCTGTTGT
ATACTGAATGTGCTGACCAACTTGGGAACCGGCATGATGAGTGCCACTGT
AGGAGGACAGTTGCTTTCCAAGCTATCAGGAGGAGTCGTATCCGTCATAG
TTGGTATAGTAATAGTTGCCTTGGTGAGCTGGGCAATGGCTACCTTTGGG
ATGAAGATATTCCAGTTCTATGAGAGATATGCTTGGTTTCCGCAATTGTT
GATCTTTTCCGTTCTCACCGGCTCGGCTGGACCGCAATTCGATTTCCATA
GCCCGACGATTGGTTCTATCGAGCAGATCAACGCAAAGCGTCTAACATAC
TTCTCACTTTGCCTATCTATTCCCTTGTCATGGATACCCGTATCCGCAGA
CTACCAGGTTTACTATTCTCCGGAGATCAGGCGATGGAAGATATGGACAG
TGACCACGATCGGTGTAAGCCTCTCGATCGCCATAACGCTTCTTCTTGGC
GCCGGGCTTGGAAGCGGTGTTGCAATCAACTCTAAATGGGCGTCTCTTTA
TGACGGTACGCCGGGGAGTCTGCTGATGGCCGGCTATGATCGGCTGGGAC
CTCTCGGAAAGCTATGCGCCTTCATCAATGTCTTAACAATTGTGTCCAAC
AATGCCCCCAGCTCGTACTCAACCGGATTGAATTTCCAGATGCTGGGAGA
GATGTGGCTCAGAGTTCCACGACCTGTTTTCACGACTGTCAGTACTCTGA
TTTACGCATCATGTGCCATCGGAGGCCGAAACTCTTTGTATGAGATATTC
GGGAATCTCATGCCGCTCATTGGATACTGGGTCATTATCTGGTTTACCAT
TGTGGTAGAACAAGACGTACTTTTCAACCGAGGGAAAGTTTACGACTGGA
CTGATTGGAACAATTGGCTTAAGCTCCCGGTTGGAGTGGCAGCTAGCACT
GCCTTTTTGATCGGTTGGGTAGGAGCCATCGTTGGCATGAATCAAGCCTA
TTATATTGGCCCAGTCTCCAGAGCGATCCCAGGTGGGTGTGATCTGGGCA
TCTGGCTGGGGTTGGGCTTCACGGCTCTTGCATTTCCGCCATTCAGAATG
CTGGAGCTGAAAATAATTGGCCGTTGAATGGACTCTGACCTAGAAAAAAG
ACAGAGATCCCCTTCCTTGCGGAGTGTGACACGAGAGCAGCTAGAGACTT
CACAAGCTCTGGGATCACCCCCTCCAACATGTGGATCGAGATACGAAAGA
TGGGCGAGAAACATCAAAGGCTTAGAGGCTCGCGGGATCGAGCCCGTGTC
TCTTGAAGAACGACTGAAGAACACCAGCTCGACCCCTTTCCGAATGATGC
TCACGTGGTTCAGTATGGGCATGGCAATCAACAATATTGTGACCGGATCT
TTGGGAACACTGGTCATGAAGCTTAGCTTCACCGACGCCGCGCTGTGTGT
CATCTTCGGTACGCTCCTGGGAGGTCTGGGAGTTGGATACATGAGCACAT
GGGGTCCCAGAAGCGGTAACCGCACACTTATCGTGTCTCGGTACTTCATG
GGATATTACCCTAGTAAGGTCTGTTGTATACTGAATGTGCTGACCAACTT
GGGAACCGGCATGATGAGTGCCACTGTAGGAGGACAGTTGCTTTCCAAGC
TATCAGGAGGAGTCGTATCCGTCATAGTTGGTATAGTAATAGTTGCCTTG
GTGAGCTGGGCAATGGCTACCTTTGGGATGAAGATATTCCAGTTCTATGA
GAGATATGCTTGGTTTCCGCAATTGTTGATCTTTTCCGTTCTCACCGGCT
CGGCTGGACCGCAATTCGATTTCCATAGCCCGACGATTGGTTCTATCGAG
CAGATCAACGCAAAGCGTCTAACATACTTCTCACTTTGCCTATCTATTCC
CTTGTCATGGATACCCGTATCCGCAGACTACCAGGTTTACTATTCTCCGG
AGATCAGGCGATGGAAGATATGGACAGTGACCACGATCGGTGTAAGCCTC
TCGATCGCCATAACGCTTCTTCTTGGCGCCGGGCTTGGAAGCGGTGTTGC
AATCAACTCTAAATGGGCGTCTCTTTATGACGGTACGCCGGGGAGTCTGC
TGATGGCCGGCTATGATCGGCTGGGACCTCTCGGAAAGCTATGCGCCTTC
ATCAATGTCTTAACAATTGTGTCCAACAATGCCCCCAGCTCGTACTCAAC
CGGATTGAATTTCCAGATGCTGGGAGAGATGTGGCTCAGAGTTCCACGAC
CTGTTTTCACGACTGTCAGTACTCTGATTTACGCATCATGTGCCATCGGA
GGCCGAAACTCTTTGTATGAGATATTCGGGAATCTCATGCCGCTCATTGG
ATACTGGGTCATTATCTGGTTTACCATTGTGGTAGAACAAGACGTACTTT
TCAACCGAGGGAAAGTTTACGACTGGACTGATTGGAACAATTGGCTTAAG
CTCCCGGTTGGAGTGGCAGCTAGCACTGCCTTTTTGATCGGTTGGGTAGG
AGCCATCGTTGGCATGAATCAAGCCTATTATATTGGCCCAGTCTCCAGAG
CGATCCCAGGTGGGTGTGATCTGGGCATCTGGCTGGGGTTGGGCTTCACG
GCTCTTGCATTTCCGCCATTCAGAATGCTGGAGCTGAAAATAATTGGCCG
TTGAATGGACTCTGACCTAGAAAAAAGACAGAGATCCCCTTCCTTGCGGA
GTGTGACACGAGAGCAGCTAGAGACTTCACAAGCTCTGGGATCACCCCCT
CCAACATGTGGATCGAGATACGAAAGATGGGCGAGAAACATCAAAGGCTT
AGAGGCTCGCGGGATCGAGCCCGTGTCTCTTGAAGAACGACTGAAGAACA
CCAGCTCGACCCCTTTCCGAATGATGCTCACGTGGTTCAGTATGGGCATG
GCAATCAACAATATTGTGACCGGATCTTTGGGAACACTGGTCATGAAGCT
TAGCTTCACCGACGCCGCGCTGTGTGTCATCTTCGGTACGCTCCTGGGAG
GTCTGGGAGTTGGATACATGAGCACATGGGGTCCCAGAAGCGGTAACCGC
ACACTTATCGTGTCTCGGTACTTCATGGGATATTACCCTAGTAAGGTCTG
TTGTATACTGAATGTGCTGACCAACTTGGGAACCGGCATGATGAGTGCCA
CTGTAGGAGGACAGTTGCTTTCCAAGCTATCAGGAGGAGTCGTATCCGTC
ATAGTTGGTATAGTAATAGTTGCCTTGGTGAGCTGGGCAATGGCTACCTT
TGGGATGAAGATATTCCAGTTCTATGAGAGATATGCTTGGTTTCCGCAAT
TGTTGATCTTTTCCGTTCTCACCGGCTCGGCTGGACCGCAATTCGATTTC
CATAGCCCGACGATTGGTTCTATCGAGCAGATCAACGCAAAGCGTCTAAC
ATACTTCTCACTTTGCCTATCTATTCCCTTGTCATGGATACCCGTATCCG
CAGACTACCAGGTTTACTATTCTCCGGAGATCAGGCGATGGAAGATATGG
ACAGTGACCACGATCGGTGTAAGCCTCTCGATCGCCATAACGCTTCTTCT
TGGCGCCGGGCTTGGAAGCGGTGTTGCAATCAACTCTAAATGGGCGTCTC
TTTATGACGGTACGCCGGGGAGTCTGCTGATGGCCGGCTATGATCGGCTG
GGACCTCTCGGAAAGCTATGCGCCTTCATCAATGTCTTAACAATTGTGTC
CAACAATGCCCCCAGCTCGTACTCAACCGGATTGAATTTCCAGATGCTGG
GAGAGATGTGGCTCAGAGTTCCACGACCTGTTTTCACGACTGTCAGTACT
CTGATTTACGCATCATGTGCCATCGGAGGCCGAAACTCTTTGTATGAGAT
ATTCGGGAATCTCATGCCGCTCATTGGATACTGGGTCATTATCTGGTTTA
CCATTGTGGTAGAACAAGACGTACTTTTCAACCGAGGGAAAGTTTACGAC
TGGACTGATTGGAACAATTGGCTTAAGCTCCCGGTTGGAGTGGCAGCTAG
CACTGCCTTTTTGATCGGTTGGGTAGGAGCCATCGTTGGCATGAATCAAG
CCTATTATATTGGCCCAGTCTCCAGAGCGATCCCAGGTGGGTGTGATCTG
GGCATCTGGCTGGGGTTGGGCTTCACGGCTCTTGCATTTCCGCCATTCAG
AATGCTGGAGCTGAAAATAATTGGCCGTTGAATGGACTCTGACCTAGAAA
AAAGACAGAGATCCCCTTCCTTGCGGAGTGTGACACGAGAGCAGCTAGAG
ACTTCACAAGCTCTGGGATCACCCCCTCCAACATGTGGATCGAGATACGA
AAGATGGGCGAGAAACATCAAAGGCTTAGAGGCTCGCGGGATCGAGCCCG
TGTCTCTTGAAGAACGACTGAAGAACACCAGCTCGACCCCTTTCCGAATG
ATGCTCACGTGGTTCAGTATGGGCATGGCAATCAACAATATTGTGACCGG
ATCTTTGGGAACACTGGTCATGAAGCTTAGCTTCACCGACGCCGCGCTGT
GTGTCATCTTCGGTACGCTCCTGGGAGGTCTGGGAGTTGGATACATGAGC
ACATGGGGTCCCAGAAGCGGTAACCGCACACTTATCGTGTCTCGGTACTT
CATGGGATATTACCCTAGTAAGGTCTGTTGTATACTGAATGTGCTGACCA
ACTTGGGAACCGGCATGATGAGTGCCACTGTAGGAGGACAGTTGCTTTCC
AAGCTATCAGGAGGAGTCGTATCCGTCATAGTTGGTATAGTAATAGTTGC
CTTGGTGAGCTGGGCAATGGCTACCTTTGGGATGAAGATATTCCAGTTCT
ATGAGAGATATGCTTGGTTTCCGCAATTGTTGATCTTTTCCGTTCTCACC
GGCTCGGCTGGACCGCAATTCGATTTCCATAGCCCGACGATTGGTTCTAT
CGAGCAGATCAACGCAAAGCGTCTAACATACTTCTCACTTTGCCTATCTA
TTCCCTTGTCATGGATACCCGTATCCGCAGACTACCAGGTTTACTATTCT
CCGGAGATCAGGCGATGGAAGATATGGACAGTGACCACGATCGGTGTAAG
CCTCTCGATCGCCATAACGCTTCTTCTTGGCGCCGGGCTTGGAAGCGGTG
TTGCAATCAACTCTAAATGGGCGTCTCTTTATGACGGTACGCCGGGGAGT
CTGCTGATGGCCGGCTATGATCGGCTGGGACCTCTCGGAAAGCTATGCGC
CTTCATCAATGTCTTAACAATTGTGTCCAACAATGCCCCCAGCTCGTACT
CAACCGGATTGAATTTCCAGATGCTGGGAGAGATGTGGCTCAGAGTTCCA
CGACCTGTTTTCACGACTGTCAGTACTCTGATTTACGCATCATGTGCCAT
CGGAGGCCGAAACTCTTTGTATGAGATATTCGGGAATCTCATGCCGCTCA
TTGGATACTGGGTCATTATCTGGTTTACCATTGTGGTAGAACAAGACGTA
CTTTTCAACCGAGGGAAAGTTTACGACTGGACTGATTGGAACAATTGGCT
TAAGCTCCCGGTTGGAGTGGCAGCTAGCACTGCCTTTTTGATCGGTTGGG
TAGGAGCCATCGTTGGCATGAATCAAGCCTATTATATTGGCCCAGTCTCC
AGAGCGATCCCAGGTGGGTGTGATCTGGGCATCTGGCTGGGGTTGGGCTT
CACGGCTCTTGCATTTCCGCCATTCAGAATGCTGGAGCTGAAAATAATTG
GCCGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR038271 |
| DBxref | InterPro:IPR001248 |
| DBxref | InterPro:IPR026030 |
| DBxref | PFAM:PF02133 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2415519..2417282 + |
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