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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2420049..2421779+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012049-T1 ID=KJC3_012049-T1|Name=KJC3_012049-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1731bp|location=Sequence derived from alignment at ch8:2420049..2421779+ (Aspergillus niger KJC3)
TTCAGTGTGACTGACTTGAGAGACTCAAAAATGCTCCAACAGTCCTCTTC
CCCCATCTTCGAGGTTATCTATATACTAGCTGTTCATCGACGCATGGACC
ACTGAACCGAATAAGCAATTATAAGCGACCAATGGATAACACCACACAGC
TCACTCCGGGGAAATTCCTGGGGTTTGTCCCCAACACGGACCCTCGGGCG
GGCTTGGGATTCCAGCAATTGGTCACTTATGCTTGCTTGCTGCTTCCGGC
CTACGCGTTCCTGGTCTCCCATCTGCGATTCCGATATCTACAGCGGCTGC
ACCAAAAATACCCCTATAACACTCGAGAGTCTTTCTCTCGCATGACCGAT
GATGAAGCCTGTGAGATACAAAAAGGCTTGGTGCAGCTGGAGTTTCCATT
CCTCTACCTCAAATCACTCCAGTTTGCTCTTTTCAGGGTGTGAAACCCCG
GCTACTTCATATTATTCTTGCTCCTATCCTGCCGACTAACTACTACGCCA
GACATACGGCATCCCGACCATCTCGACAGTGCTTACAAATACAACCCAGT
TCTCAAAGCCCGACACGGCCCTCAAACGCTACGCTGATACCGCCGCCCTG
ATTCAAGAATTTGTAGGCCATGCGCCAACCTCTCGTCGTGCTTGTACTTC
TATTGCACGCACCCGCTGGATCCACAGCAACTATCGCGCTTCAGGCAAGA
TCCTGGAAGATGATATGTTGTACACCCTTGGCCTTTTTGCTATTCAGCCA
GTCAGATTTGTGGAAATGTATGAATGGCGGGACCTGAGCGACCTTGAGAG
ATGTGCTATCGGTACCTTCTGGAAAAGTTTGGGCGACAGCTTGGATATCA
GCTATGATGCCCTCCCATCAGGTAAAACTGGGTTTCGCGATGGCCTTCAT
TGGCTGGAGGAGATGATGGTCTGGAGCGACGATTATGAGGTTCGTTGCAT
GGTACCTCATCTCAAGAACCGTGAGGTGGCCGATCAAACCATCGCAGTGC
TGCTGTACATGCTTCCCCAGCCACTGCACTTTATTGGGATGAGATTTGTC
TCGTTCATGATGGACGATCGCTTGCGGAAGGCCATGTTGTGAGTGATGCC
GTGCATCTCTTTGTGTAATGATTCCACGGACTCGAACAACCAGCTGATTG
ATTCCCTTTCCAGGATCGACCCTCCTCCAGCTTTTGATGCTAAGCTTTTC
TCGTTACTGTTCTCCGCTCGTCGGTTTGCATTGCGGTATCTCGCGCTACC
CCGCCCTTATTTTCTGCGGTATGTTAGTTACACCGATGATTATAACGAGA
ACGGTCGCATCTACATGACCAACTGGGATGCCGCCCCTTACTATGTGAAG
CCGAGTCTCCGGAACCGCTGGGGCCCAGTTGCCTGGCTGACTTGGGCGCT
TGGTCGGCCTTTGCCCGGAGATGAGGGGGACAAGTATTATCCAAAGGGGT
ATGATAATCTCAACGTAGGCCCGAAGTATTTTGAAGGTAAGGGCCGTCAG
GGTATGGAGGACATTATGAAGGAGTTGGAGAATACACGACGGGGCCAATG
CCCATTCCACTGAGCTTTGCACGGAGCTGGCCTCACTCGATTGGAATGCG
CGTTGGACGAAGTTATGTCGTTCTTATAAAGCGTATATTGTGCTGTTAAA
TGTTGGTCTACTTAGCGGGCCCTTTTTCCCGCATCCGATCATCTACAAGC
AACTATTGAAGATAGTTTATGCATTTCGAAG back to topCoding sequence (CDS) from alignment at ch8:2420049..2421779+ >KJC3_012049-T1 ID=KJC3_012049-T1|Name=KJC3_012049-T1|organism=Aspergillus niger KJC3|type=CDS|length=3879bp|location=Sequence derived from alignment at ch8:2420049..2421779+ (Aspergillus niger KJC3)
ATGGATAACACCACACAGCTCACTCCGGGGAAATTCCTGGGGTTTGTCCC
CAACACGGACCCTCGGGCGGGCTTGGGATTCCAGCAATTGGTCACTTATG
CTTGCTTGCTGCTTCCGGCCTACGCGTTCCTGGTCTCCCATCTGCGATTC
CGATATCTACAGCGGCTGCACCAAAAATACCCCTATAACACTCGAGAGTC
TTTCTCTCGCATGACCGATGATGAAGCCTGTGAGATACAAAAAGGCTTGG
TGCAGCTGGAGTTTCCATTCCTCTACCTCAAATCACTCCAGTTTGCTCTT
TTCAGGACATACGGCATCCCGACCATCTCGACAGTGCTTACAAATACAAC
CCAGTTCTCAAAGCCCGACACGGCCCTCAAACGCTACGCTGATACCGCCG
CCCTGATTCAAGAATTTGTAGGCCATGCGCCAACCTCTCGTCGTGCTTGT
ACTTCTATTGCACGCACCCGCTGGATCCACAGCAACTATCGCGCTTCAGG
CAAGATCCTGGAAGATGATATGTTGTACACCCTTGGCCTTTTTGCTATTC
AGCCAGTCAGATTTGTGGAAATGTATGAATGGCGGGACCTGAGCGACCTT
GAGAGATGTGCTATCGGTACCTTCTGGAAAAGTTTGGGCGACAGCTTGGA
TATCAGCTATGATGCCCTCCCATCAGGTAAAACTGGGTTTCGCGATGGCC
TTCATTGGCTGGAGGAGATGATGGTCTGGAGCGACGATTATGAGGTTCGT
TGCATGGTACCTCATCTCAAGAACCGTGAGGTGGCCGATCAAACCATCGC
AGTGCTGCTGTACATGCTTCCCCAGCCACTGCACTTTATTGGGATGAGAT
TTGTCTCGTTCATGATGGACGATCGCTTGCGGAAGGCCATGTTGATCGAC
CCTCCTCCAGCTTTTGATGCTAAGCTTTTCTCGTTACTGTTCTCCGCTCG
TCGGTTTGCATTGCGGTATCTCGCGCTACCCCGCCCTTATTTTCTGCGGT
ATGTTAGTTACACCGATGATTATAACGAGAACGGTCGCATCTACATGACC
AACTGGGATGCCGCCCCTTACTATGTGAAGCCGAGTCTCCGGAACCGCTG
GGGCCCAGTTGCCTGGCTGACTTGGGCGCTTGGTCGGCCTTTGCCCGGAG
ATGAGGGGGACAAGTATTATCCAAAGGGGTATGATAATCTCAACGTAGGC
CCGAAGTATTTTGAAGGTAAGGGCCGTCAGGGTATGGAGGACATTATGAA
GGAGTTGGAGAATACACGACGGGGCCAATGCCCATTCCACTGAATGGATA
ACACCACACAGCTCACTCCGGGGAAATTCCTGGGGTTTGTCCCCAACACG
GACCCTCGGGCGGGCTTGGGATTCCAGCAATTGGTCACTTATGCTTGCTT
GCTGCTTCCGGCCTACGCGTTCCTGGTCTCCCATCTGCGATTCCGATATC
TACAGCGGCTGCACCAAAAATACCCCTATAACACTCGAGAGTCTTTCTCT
CGCATGACCGATGATGAAGCCTGTGAGATACAAAAAGGCTTGGTGCAGCT
GGAGTTTCCATTCCTCTACCTCAAATCACTCCAGTTTGCTCTTTTCAGGA
CATACGGCATCCCGACCATCTCGACAGTGCTTACAAATACAACCCAGTTC
TCAAAGCCCGACACGGCCCTCAAACGCTACGCTGATACCGCCGCCCTGAT
TCAAGAATTTGTAGGCCATGCGCCAACCTCTCGTCGTGCTTGTACTTCTA
TTGCACGCACCCGCTGGATCCACAGCAACTATCGCGCTTCAGGCAAGATC
CTGGAAGATGATATGTTGTACACCCTTGGCCTTTTTGCTATTCAGCCAGT
CAGATTTGTGGAAATGTATGAATGGCGGGACCTGAGCGACCTTGAGAGAT
GTGCTATCGGTACCTTCTGGAAAAGTTTGGGCGACAGCTTGGATATCAGC
TATGATGCCCTCCCATCAGGTAAAACTGGGTTTCGCGATGGCCTTCATTG
GCTGGAGGAGATGATGGTCTGGAGCGACGATTATGAGGTTCGTTGCATGG
TACCTCATCTCAAGAACCGTGAGGTGGCCGATCAAACCATCGCAGTGCTG
CTGTACATGCTTCCCCAGCCACTGCACTTTATTGGGATGAGATTTGTCTC
GTTCATGATGGACGATCGCTTGCGGAAGGCCATGTTGATCGACCCTCCTC
CAGCTTTTGATGCTAAGCTTTTCTCGTTACTGTTCTCCGCTCGTCGGTTT
GCATTGCGGTATCTCGCGCTACCCCGCCCTTATTTTCTGCGGTATGTTAG
TTACACCGATGATTATAACGAGAACGGTCGCATCTACATGACCAACTGGG
ATGCCGCCCCTTACTATGTGAAGCCGAGTCTCCGGAACCGCTGGGGCCCA
GTTGCCTGGCTGACTTGGGCGCTTGGTCGGCCTTTGCCCGGAGATGAGGG
GGACAAGTATTATCCAAAGGGGTATGATAATCTCAACGTAGGCCCGAAGT
ATTTTGAAGGTAAGGGCCGTCAGGGTATGGAGGACATTATGAAGGAGTTG
GAGAATACACGACGGGGCCAATGCCCATTCCACTGAATGGATAACACCAC
ACAGCTCACTCCGGGGAAATTCCTGGGGTTTGTCCCCAACACGGACCCTC
GGGCGGGCTTGGGATTCCAGCAATTGGTCACTTATGCTTGCTTGCTGCTT
CCGGCCTACGCGTTCCTGGTCTCCCATCTGCGATTCCGATATCTACAGCG
GCTGCACCAAAAATACCCCTATAACACTCGAGAGTCTTTCTCTCGCATGA
CCGATGATGAAGCCTGTGAGATACAAAAAGGCTTGGTGCAGCTGGAGTTT
CCATTCCTCTACCTCAAATCACTCCAGTTTGCTCTTTTCAGGACATACGG
CATCCCGACCATCTCGACAGTGCTTACAAATACAACCCAGTTCTCAAAGC
CCGACACGGCCCTCAAACGCTACGCTGATACCGCCGCCCTGATTCAAGAA
TTTGTAGGCCATGCGCCAACCTCTCGTCGTGCTTGTACTTCTATTGCACG
CACCCGCTGGATCCACAGCAACTATCGCGCTTCAGGCAAGATCCTGGAAG
ATGATATGTTGTACACCCTTGGCCTTTTTGCTATTCAGCCAGTCAGATTT
GTGGAAATGTATGAATGGCGGGACCTGAGCGACCTTGAGAGATGTGCTAT
CGGTACCTTCTGGAAAAGTTTGGGCGACAGCTTGGATATCAGCTATGATG
CCCTCCCATCAGGTAAAACTGGGTTTCGCGATGGCCTTCATTGGCTGGAG
GAGATGATGGTCTGGAGCGACGATTATGAGGTTCGTTGCATGGTACCTCA
TCTCAAGAACCGTGAGGTGGCCGATCAAACCATCGCAGTGCTGCTGTACA
TGCTTCCCCAGCCACTGCACTTTATTGGGATGAGATTTGTCTCGTTCATG
ATGGACGATCGCTTGCGGAAGGCCATGTTGATCGACCCTCCTCCAGCTTT
TGATGCTAAGCTTTTCTCGTTACTGTTCTCCGCTCGTCGGTTTGCATTGC
GGTATCTCGCGCTACCCCGCCCTTATTTTCTGCGGTATGTTAGTTACACC
GATGATTATAACGAGAACGGTCGCATCTACATGACCAACTGGGATGCCGC
CCCTTACTATGTGAAGCCGAGTCTCCGGAACCGCTGGGGCCCAGTTGCCT
GGCTGACTTGGGCGCTTGGTCGGCCTTTGCCCGGAGATGAGGGGGACAAG
TATTATCCAAAGGGGTATGATAATCTCAACGTAGGCCCGAAGTATTTTGA
AGGTAAGGGCCGTCAGGGTATGGAGGACATTATGAAGGAGTTGGAGAATA
CACGACGGGGCCAATGCCCATTCCACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012049-T1.utr5p1 | KJC3_012049-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012049-T1.utr3p1 | KJC3_012049-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018713 |
| DBxref | PFAM:PF09995 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2420049..2421779 + |
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