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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2422433..2424675+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012050-T1 ID=KJC3_012050-T1|Name=KJC3_012050-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2243bp|location=Sequence derived from alignment at ch8:2422433..2424675+ (Aspergillus niger KJC3)
ATCCTATCATCCTCAAGCCAACCTCTCCTTAACCCAAATAATAAAACTTT
CCTTACTCACTCGGGATTCGATTGCCGTCGCATTTATATCGTCTACCGTG
CATAACAACAATGGCGTCGCATGCTCCGAACGACGACGACCGCTCCAACA
ACCCTCCTCCGCTAAGCAACTTCCCCCAAGATCCTTCGGAATTCGACAGC
GACCCGCGCATCTCGTTCTCGAAGCTAGACGACAAGTTCATTCTGGAAAC
GGAGGATGGACAGGAATACGAATATGATACGGTGCTAAAGAGATGGATTC
CGACGGTGTGTGCGCGCTCTTTCTCCAGCTGGGTGGTGTGATGTCTTGTA
GTAGCTGTTGAACTACTGCTACCTTTGTTTTTCTCTACTTTGCTGTTCCT
CCCCGCCCCCTTTTGTTTCCTTTCTGTGTCGACTCAACTGGTTATGGAAC
CTTCCTCTCTTGTTGCAAATAGACCAAGACACACGTCTATCATTGCAGGG
ATTGTTTGATTGGTTCGTGAAACTGATTGCTTGGTTGGCGCCGCTTGCGC
CCGCCCGGGGTGCCTCCAGGTCGATGAAGACTTGCTACAACAACAGCAAG
AAGCATATAGAGTCCAGGGCGTCAATGAGGAGGAACAGATTACTGCGGCG
CAGTTGAGGAAGAAGCGCAAGCAACAGGCTACTACGGAAGAGGTTAGTCC
AGCAGTTTACGATGATGCTTCCTTGACTTGGCCCCAATGGCACTGAGATG
GGCCTAAAACTAAGAAGATATGAAATCGCGTAGGGCAATGGGCAACAGAA
GCCTAAGAAACAGCGCGTCAATACCGCGGTCTATGTGACTTCGATTCCTC
TGGATGCTGAATTCGACGAAATCCGCGACGTCTTCTCCAAGTGTGGTGTT
ATCGCCGAGGAGATCGATAGCGGCCGACCGCGCATCAAGATGTACACCGA
TGAGAGCGGAAACTTCAAAGGTGAAGCTCTCGTTGTGTACTTCCGGCCTG
AGTCCGTCAATCTCGCGATACAGATGCTGGATGATTCCAACTTTAGGATT
GGGGTACCCGGACCGCAGGGACCCATGCGAGTGCAACATGCGGATTTCTC
GTTCAAGAGCCAGCAAGAGGCGCCTACGAAGACTAGTATGAGGGATAAGA
AGAAGATTATGCGACGGACACAGAAGTTGAACAGGTATGGGGGAACTACA
TTTGACCTGGGATGATTGGGCTGGGCTTTGCTGATATACGCGTTTAGCAA
ACTTGCTGACTGGGACGATGACGACCCGTCTGCCTTGCCGGATACGACTT
CCCGTTTTGATAAGATCGTGATCTTGAAACATATGTTCACGTTGAAGGAA
TTAGATGTACGGGAGTATCCATCCCGCGCTAGGAGTGATTGGTAAAAGGA
ACTAACGTTTGGTGTAGGAGGATCCTGCGGCCATTCTTGATATCAAGGAA
GATATTCGGGATGAGTGCTCGAAGCTGGGGGATGTGACCAACGTTGTTCT
CTACGATAAGGAACCCGAGGGAGTGGTGAGCGTTCGCTTTTCCGATCCCG
AGGCAGCCAGGAGCTGTGTCAAGGTAAGCTTGATCATGGGATGACGATGG
CCCAAACCCTCCGGAAAGGAACATATGCTGATGATACTGTTACATTTAGA
TGATGGATGGGCGGTTTTTCGCTGGCACCCGAGTCGATGCCTATATCGCG
GATGGCAGTGAGAGATTTAAGAAGACCAATGAGAAGCGTGCAGCACTGGA
AGATCTGGCGGAGAAAGGATTGGATGCGTCCGATGAAGAGGAGGAGCAGC
GATTGGATGAGTTTGGCACGTGGTTGGAAAGCTCACATACGGTCGAGAAC
ACGGCCAAGTGATGGTGATGGTGGTGATGCTTTTTGGGATGTAATCATTA
TTAGGGGGATCTGGAACTGGATGGGATGGGATGGGATGGGCGTAATCGTT
TTCTGAGGCTGGCTGGTCACTTTAGACAACCTAAGGGATTGTAGACTTGT
ATGTACTTATAAGAGCGTTCTGGTTGTGATTAGGATCATGTTGACGGGTG
CTCATCATTTTGTCCATTTGTTTACACGAAGGTCCATGAACCCATGGTAA
GGCCGGTCAGGCCATGATCAAGTCTGGTTCGCGTGTGGACAAGCCAAGTC
ACGGGGCGTGACTGTCACTGGACCGCAACGCCGTCCCGTGACGACGCCAA
ACCGAATTGGGGAGAGCCCCTATTTACCTGCCCAAAATATCGG back to topCoding sequence (CDS) from alignment at ch8:2422433..2424675+ >KJC3_012050-T1 ID=KJC3_012050-T1|Name=KJC3_012050-T1|organism=Aspergillus niger KJC3|type=CDS|length=7182bp|location=Sequence derived from alignment at ch8:2422433..2424675+ (Aspergillus niger KJC3)
ATGGCGTCGCATGCTCCGAACGACGACGACCGCTCCAACAACCCTCCTCC
GCTAAGCAACTTCCCCCAAGATCCTTCGGAATTCGACAGCGACCCGCGCA
TCTCGTTCTCGAAGCTAGACGACAAGTTCATTCTGGAAACGGAGGATGGA
CAGGAATACGAATATGATACGGTGCTAAAGAGATGGATTCCGACGGTCGA
TGAAGACTTGCTACAACAACAGCAAGAAGCATATAGAGTCCAGGGCGTCA
ATGAGGAGGAACAGATTACTGCGGCGCAGTTGAGGAAGAAGCGCAAGCAA
CAGGCTACTACGGAAGAGGGCAATGGGCAACAGAAGCCTAAGAAACAGCG
CGTCAATACCGCGGTCTATGTGACTTCGATTCCTCTGGATGCTGAATTCG
ACGAAATCCGCGACGTCTTCTCCAAGTGTGGTGTTATCGCCGAGGAGATC
GATAGCGGCCGACCGCGCATCAAGATGTACACCGATGAGAGCGGAAACTT
CAAAGGTGAAGCTCTCGTTGTGTACTTCCGGCCTGAGTCCGTCAATCTCG
CGATACAGATGCTGGATGATTCCAACTTTAGGATTGGGGTACCCGGACCG
CAGGGACCCATGCGAGTGCAACATGCGGATTTCTCGTTCAAGAGCCAGCA
AGAGGCGCCTACGAAGACTAGTATGAGGGATAAGAAGAAGATTATGCGAC
GGACACAGAAGTTGAACAGCAAACTTGCTGACTGGGACGATGACGACCCG
TCTGCCTTGCCGGATACGACTTCCCGTTTTGATAAGATCGTGATCTTGAA
ACATATGTTCACGTTGAAGGAATTAGATGAGGATCCTGCGGCCATTCTTG
ATATCAAGGAAGATATTCGGGATGAGTGCTCGAAGCTGGGGGATGTGACC
AACGTTGTTCTCTACGATAAGGAACCCGAGGGAGTGGTGAGCGTTCGCTT
TTCCGATCCCGAGGCAGCCAGGAGCTGTGTCAAGATGATGGATGGGCGGT
TTTTCGCTGGCACCCGAGTCGATGCCTATATCGCGGATGGCAGTGAGAGA
TTTAAGAAGACCAATGAGAAGCGTGCAGCACTGGAAGATCTGGCGGAGAA
AGGATTGGATGCGTCCGATGAAGAGGAGGAGCAGCGATTGGATGAGTTTG
GCACGTGGTTGGAAAGCTCACATACGGTCGAGAACACGGCCAAGTGAATG
GCGTCGCATGCTCCGAACGACGACGACCGCTCCAACAACCCTCCTCCGCT
AAGCAACTTCCCCCAAGATCCTTCGGAATTCGACAGCGACCCGCGCATCT
CGTTCTCGAAGCTAGACGACAAGTTCATTCTGGAAACGGAGGATGGACAG
GAATACGAATATGATACGGTGCTAAAGAGATGGATTCCGACGGTCGATGA
AGACTTGCTACAACAACAGCAAGAAGCATATAGAGTCCAGGGCGTCAATG
AGGAGGAACAGATTACTGCGGCGCAGTTGAGGAAGAAGCGCAAGCAACAG
GCTACTACGGAAGAGGGCAATGGGCAACAGAAGCCTAAGAAACAGCGCGT
CAATACCGCGGTCTATGTGACTTCGATTCCTCTGGATGCTGAATTCGACG
AAATCCGCGACGTCTTCTCCAAGTGTGGTGTTATCGCCGAGGAGATCGAT
AGCGGCCGACCGCGCATCAAGATGTACACCGATGAGAGCGGAAACTTCAA
AGGTGAAGCTCTCGTTGTGTACTTCCGGCCTGAGTCCGTCAATCTCGCGA
TACAGATGCTGGATGATTCCAACTTTAGGATTGGGGTACCCGGACCGCAG
GGACCCATGCGAGTGCAACATGCGGATTTCTCGTTCAAGAGCCAGCAAGA
GGCGCCTACGAAGACTAGTATGAGGGATAAGAAGAAGATTATGCGACGGA
CACAGAAGTTGAACAGCAAACTTGCTGACTGGGACGATGACGACCCGTCT
GCCTTGCCGGATACGACTTCCCGTTTTGATAAGATCGTGATCTTGAAACA
TATGTTCACGTTGAAGGAATTAGATGAGGATCCTGCGGCCATTCTTGATA
TCAAGGAAGATATTCGGGATGAGTGCTCGAAGCTGGGGGATGTGACCAAC
GTTGTTCTCTACGATAAGGAACCCGAGGGAGTGGTGAGCGTTCGCTTTTC
CGATCCCGAGGCAGCCAGGAGCTGTGTCAAGATGATGGATGGGCGGTTTT
TCGCTGGCACCCGAGTCGATGCCTATATCGCGGATGGCAGTGAGAGATTT
AAGAAGACCAATGAGAAGCGTGCAGCACTGGAAGATCTGGCGGAGAAAGG
ATTGGATGCGTCCGATGAAGAGGAGGAGCAGCGATTGGATGAGTTTGGCA
CGTGGTTGGAAAGCTCACATACGGTCGAGAACACGGCCAAGTGAATGGCG
TCGCATGCTCCGAACGACGACGACCGCTCCAACAACCCTCCTCCGCTAAG
CAACTTCCCCCAAGATCCTTCGGAATTCGACAGCGACCCGCGCATCTCGT
TCTCGAAGCTAGACGACAAGTTCATTCTGGAAACGGAGGATGGACAGGAA
TACGAATATGATACGGTGCTAAAGAGATGGATTCCGACGGTCGATGAAGA
CTTGCTACAACAACAGCAAGAAGCATATAGAGTCCAGGGCGTCAATGAGG
AGGAACAGATTACTGCGGCGCAGTTGAGGAAGAAGCGCAAGCAACAGGCT
ACTACGGAAGAGGGCAATGGGCAACAGAAGCCTAAGAAACAGCGCGTCAA
TACCGCGGTCTATGTGACTTCGATTCCTCTGGATGCTGAATTCGACGAAA
TCCGCGACGTCTTCTCCAAGTGTGGTGTTATCGCCGAGGAGATCGATAGC
GGCCGACCGCGCATCAAGATGTACACCGATGAGAGCGGAAACTTCAAAGG
TGAAGCTCTCGTTGTGTACTTCCGGCCTGAGTCCGTCAATCTCGCGATAC
AGATGCTGGATGATTCCAACTTTAGGATTGGGGTACCCGGACCGCAGGGA
CCCATGCGAGTGCAACATGCGGATTTCTCGTTCAAGAGCCAGCAAGAGGC
GCCTACGAAGACTAGTATGAGGGATAAGAAGAAGATTATGCGACGGACAC
AGAAGTTGAACAGCAAACTTGCTGACTGGGACGATGACGACCCGTCTGCC
TTGCCGGATACGACTTCCCGTTTTGATAAGATCGTGATCTTGAAACATAT
GTTCACGTTGAAGGAATTAGATGAGGATCCTGCGGCCATTCTTGATATCA
AGGAAGATATTCGGGATGAGTGCTCGAAGCTGGGGGATGTGACCAACGTT
GTTCTCTACGATAAGGAACCCGAGGGAGTGGTGAGCGTTCGCTTTTCCGA
TCCCGAGGCAGCCAGGAGCTGTGTCAAGATGATGGATGGGCGGTTTTTCG
CTGGCACCCGAGTCGATGCCTATATCGCGGATGGCAGTGAGAGATTTAAG
AAGACCAATGAGAAGCGTGCAGCACTGGAAGATCTGGCGGAGAAAGGATT
GGATGCGTCCGATGAAGAGGAGGAGCAGCGATTGGATGAGTTTGGCACGT
GGTTGGAAAGCTCACATACGGTCGAGAACACGGCCAAGTGAATGGCGTCG
CATGCTCCGAACGACGACGACCGCTCCAACAACCCTCCTCCGCTAAGCAA
CTTCCCCCAAGATCCTTCGGAATTCGACAGCGACCCGCGCATCTCGTTCT
CGAAGCTAGACGACAAGTTCATTCTGGAAACGGAGGATGGACAGGAATAC
GAATATGATACGGTGCTAAAGAGATGGATTCCGACGGTCGATGAAGACTT
GCTACAACAACAGCAAGAAGCATATAGAGTCCAGGGCGTCAATGAGGAGG
AACAGATTACTGCGGCGCAGTTGAGGAAGAAGCGCAAGCAACAGGCTACT
ACGGAAGAGGGCAATGGGCAACAGAAGCCTAAGAAACAGCGCGTCAATAC
CGCGGTCTATGTGACTTCGATTCCTCTGGATGCTGAATTCGACGAAATCC
GCGACGTCTTCTCCAAGTGTGGTGTTATCGCCGAGGAGATCGATAGCGGC
CGACCGCGCATCAAGATGTACACCGATGAGAGCGGAAACTTCAAAGGTGA
AGCTCTCGTTGTGTACTTCCGGCCTGAGTCCGTCAATCTCGCGATACAGA
TGCTGGATGATTCCAACTTTAGGATTGGGGTACCCGGACCGCAGGGACCC
ATGCGAGTGCAACATGCGGATTTCTCGTTCAAGAGCCAGCAAGAGGCGCC
TACGAAGACTAGTATGAGGGATAAGAAGAAGATTATGCGACGGACACAGA
AGTTGAACAGCAAACTTGCTGACTGGGACGATGACGACCCGTCTGCCTTG
CCGGATACGACTTCCCGTTTTGATAAGATCGTGATCTTGAAACATATGTT
CACGTTGAAGGAATTAGATGAGGATCCTGCGGCCATTCTTGATATCAAGG
AAGATATTCGGGATGAGTGCTCGAAGCTGGGGGATGTGACCAACGTTGTT
CTCTACGATAAGGAACCCGAGGGAGTGGTGAGCGTTCGCTTTTCCGATCC
CGAGGCAGCCAGGAGCTGTGTCAAGATGATGGATGGGCGGTTTTTCGCTG
GCACCCGAGTCGATGCCTATATCGCGGATGGCAGTGAGAGATTTAAGAAG
ACCAATGAGAAGCGTGCAGCACTGGAAGATCTGGCGGAGAAAGGATTGGA
TGCGTCCGATGAAGAGGAGGAGCAGCGATTGGATGAGTTTGGCACGTGGT
TGGAAAGCTCACATACGGTCGAGAACACGGCCAAGTGAATGGCGTCGCAT
GCTCCGAACGACGACGACCGCTCCAACAACCCTCCTCCGCTAAGCAACTT
CCCCCAAGATCCTTCGGAATTCGACAGCGACCCGCGCATCTCGTTCTCGA
AGCTAGACGACAAGTTCATTCTGGAAACGGAGGATGGACAGGAATACGAA
TATGATACGGTGCTAAAGAGATGGATTCCGACGGTCGATGAAGACTTGCT
ACAACAACAGCAAGAAGCATATAGAGTCCAGGGCGTCAATGAGGAGGAAC
AGATTACTGCGGCGCAGTTGAGGAAGAAGCGCAAGCAACAGGCTACTACG
GAAGAGGGCAATGGGCAACAGAAGCCTAAGAAACAGCGCGTCAATACCGC
GGTCTATGTGACTTCGATTCCTCTGGATGCTGAATTCGACGAAATCCGCG
ACGTCTTCTCCAAGTGTGGTGTTATCGCCGAGGAGATCGATAGCGGCCGA
CCGCGCATCAAGATGTACACCGATGAGAGCGGAAACTTCAAAGGTGAAGC
TCTCGTTGTGTACTTCCGGCCTGAGTCCGTCAATCTCGCGATACAGATGC
TGGATGATTCCAACTTTAGGATTGGGGTACCCGGACCGCAGGGACCCATG
CGAGTGCAACATGCGGATTTCTCGTTCAAGAGCCAGCAAGAGGCGCCTAC
GAAGACTAGTATGAGGGATAAGAAGAAGATTATGCGACGGACACAGAAGT
TGAACAGCAAACTTGCTGACTGGGACGATGACGACCCGTCTGCCTTGCCG
GATACGACTTCCCGTTTTGATAAGATCGTGATCTTGAAACATATGTTCAC
GTTGAAGGAATTAGATGAGGATCCTGCGGCCATTCTTGATATCAAGGAAG
ATATTCGGGATGAGTGCTCGAAGCTGGGGGATGTGACCAACGTTGTTCTC
TACGATAAGGAACCCGAGGGAGTGGTGAGCGTTCGCTTTTCCGATCCCGA
GGCAGCCAGGAGCTGTGTCAAGATGATGGATGGGCGGTTTTTCGCTGGCA
CCCGAGTCGATGCCTATATCGCGGATGGCAGTGAGAGATTTAAGAAGACC
AATGAGAAGCGTGCAGCACTGGAAGATCTGGCGGAGAAAGGATTGGATGC
GTCCGATGAAGAGGAGGAGCAGCGATTGGATGAGTTTGGCACGTGGTTGG
AAAGCTCACATACGGTCGAGAACACGGCCAAGTGAATGGCGTCGCATGCT
CCGAACGACGACGACCGCTCCAACAACCCTCCTCCGCTAAGCAACTTCCC
CCAAGATCCTTCGGAATTCGACAGCGACCCGCGCATCTCGTTCTCGAAGC
TAGACGACAAGTTCATTCTGGAAACGGAGGATGGACAGGAATACGAATAT
GATACGGTGCTAAAGAGATGGATTCCGACGGTCGATGAAGACTTGCTACA
ACAACAGCAAGAAGCATATAGAGTCCAGGGCGTCAATGAGGAGGAACAGA
TTACTGCGGCGCAGTTGAGGAAGAAGCGCAAGCAACAGGCTACTACGGAA
GAGGGCAATGGGCAACAGAAGCCTAAGAAACAGCGCGTCAATACCGCGGT
CTATGTGACTTCGATTCCTCTGGATGCTGAATTCGACGAAATCCGCGACG
TCTTCTCCAAGTGTGGTGTTATCGCCGAGGAGATCGATAGCGGCCGACCG
CGCATCAAGATGTACACCGATGAGAGCGGAAACTTCAAAGGTGAAGCTCT
CGTTGTGTACTTCCGGCCTGAGTCCGTCAATCTCGCGATACAGATGCTGG
ATGATTCCAACTTTAGGATTGGGGTACCCGGACCGCAGGGACCCATGCGA
GTGCAACATGCGGATTTCTCGTTCAAGAGCCAGCAAGAGGCGCCTACGAA
GACTAGTATGAGGGATAAGAAGAAGATTATGCGACGGACACAGAAGTTGA
ACAGCAAACTTGCTGACTGGGACGATGACGACCCGTCTGCCTTGCCGGAT
ACGACTTCCCGTTTTGATAAGATCGTGATCTTGAAACATATGTTCACGTT
GAAGGAATTAGATGAGGATCCTGCGGCCATTCTTGATATCAAGGAAGATA
TTCGGGATGAGTGCTCGAAGCTGGGGGATGTGACCAACGTTGTTCTCTAC
GATAAGGAACCCGAGGGAGTGGTGAGCGTTCGCTTTTCCGATCCCGAGGC
AGCCAGGAGCTGTGTCAAGATGATGGATGGGCGGTTTTTCGCTGGCACCC
GAGTCGATGCCTATATCGCGGATGGCAGTGAGAGATTTAAGAAGACCAAT
GAGAAGCGTGCAGCACTGGAAGATCTGGCGGAGAAAGGATTGGATGCGTC
CGATGAAGAGGAGGAGCAGCGATTGGATGAGTTTGGCACGTGGTTGGAAA
GCTCACATACGGTCGAGAACACGGCCAAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000398 | mRNA splicing, via spliceosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012050-T1.utr5p1 | KJC3_012050-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012050-T1.utr3p1 | KJC3_012050-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR034392 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2422433..2424675 + |
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