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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2438400..2440803- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012055-T1 ID=KJC3_012055-T1|Name=KJC3_012055-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2404bp|location=Sequence derived from alignment at ch8:2438400..2440803- (Aspergillus niger KJC3)
CCTCGCCCCGGACTGACCACCAAACTAAACGAACCTCTTCGTCCTTCCTC
AATCCTTTCCTTTGGCTCCTTCATCCCCGATCTCTCCTCTTTCTCCTCTG
CTTGCTCCCCTTCTTCTCTCCCTAGACTTTGCTTCTTTCCGCTGTCTGCG
CCCTAACTATTTGCCACCCCGATCCGCTGTCGTCCTCCCCGTACCCATTC
TAGTTCGCCCCCTCCGGTCCAATAAATCACCCCTATCCTTGAGCTGCCCT
TACACTGTGCTTGTATCAGGTTGTCTCTTCCGCCTGATCGTGTTTCACTT
CTCCGCCTATCGGTGGGAACCTACAATTTTATCGATTCCGATGTCATTCC
TTCCTTAATTAGCCTCCAATGCCGACTCCGAGTGATAACACCCCGCCCTT
GAATGCTTCAATCGCAGAAGAAATCTCCGCTCGCTCTACCTGTCCCCCAG
AGGTTGAAAGAGAGACATTACATACCAGAGAAGAAAGGCCGTATCCCTGG
GTGTCGGCGTGGGAAAGGAGAAGCACCAGCGATGATGCTCCCGACAACAC
GTTTTCGCCAACCGTCCCATCAAACCAGACCGCCTTAACGCCATCAGATG
GAACTCCCTTTACTTCTACTGATGCGGACCCCGTGAGGGGCGAGCCAGTA
GCCAGAGCGCCCACGAAGGGCGTGGGTAGATCGGAAGATGAACCTGCTGC
GGGGAGACTGAGCCCTGCTGCGGAGTCATCGTGCTCCTCCGGCCCATCAT
CTCCAGTCACCCCTTCATCGGCCACTTCTCTACTAAGCTATGAATTTTCT
AACATTCGGGTATGGTGGCCTACTTTTATCCTTCCCGTCTCTAGGTCCCC
CTTGCTGATTGTGCTAGCTGTTACCCAATTATTCGTCGTCTTTTTTGCGA
CCGGGAAGTAGATTTACTGGCACGCAGCAGTCAGACAGCCATGTCTACAG
CGTTGATGTGGAGATCAAGCACGTTGATATGCTTGAATCTTATCTTTGTG
GATACCTCCGCATACAAGGTCCGTGAGCGCTTGCACCAGCCCGCTGTGGC
CCATTCTAATCTTTTTGCATCAGGTCTTACCGAGGATCACCCTACTCTAA
CAACGTTTTTTGAGGGCGAAATCATCGGAACCAAGCACACGTTTAAAACT
AGAAATGAAGCATGGGGCGCGACCGAAAAGACTGACATGCAACATTGGGG
ACGGTTTCCCGCTTGGCGATCGCAGGCGAAACAGGCGAAGAGACCGGATT
TCACATTTCGAAATTTTGCCCAGCGTGAGCATCTCTTCATGCGTTGGAAA
GAGTACTTCCTCGTTCCCGATCATCGCGTGAGGTCGATCTCCGGAGCCAG
CTTCGAAGGCTTCTACTACATATGTTTTAATCAGGTGGAGGGAACGGTTG
CTGGGATTTACTTTCACGCCAAGAGCGAAAAGTATGTGTCTGCCTCATCC
CAGTGGTATTTATGACAGACAAAACTGACTTGGTTAATTGCTAGGTATCA
ACAACTCGAACTCAGACATGTCAAAGACTACGGTTGTGCGCCAGCCATGG
AGTTCCGTTGATCTTCTGGCGGATTTGTCCAGTATTCGATTCTACTACTG
CAAAAGGATCTCATCTACAATAACATCCTACGGTTTCACATGACTCTACA
TTCTAATGGGTATTATATGGTCACGTTCATTTCCGTGCCTCCCAGCCGCG
ATGGCTGATCTGTTACGGTTATACTGTCGGAGTTACTATTACCCCGCTCT
GTTTTGACTGATGTCTCTTGACGAATTTTCTTCCGACTTGTCTTCTTCCT
TTTTCTCTCTTCTATCGGCGCAGGCTTGGATGATACGATATGGTATGGAA
CGGAACTCTATTCGCCAAATTTATCCTCGCACTTTTCTATTTTCTTCAAT
ATGACGCAGCGCAGCACAACAAACGCAACACAACACACTGTATCGTCTTC
TCTCTTGACCGTGAGGACTCTTATTTGATATACTAGGCAGCGGTATCGGG
GCGAGCGCAGACTCGACTTCCTCATTGATGTCTGCTTTTTCATTCAATTT
AGTTGTTGCTTCTTTTCTCAATTATGACCGGTTTAACTTAGTTCCGATAG
CGGTAGCGTTGGCCTCCTTGTTGTGCAAGGGACAATTTTCTCTGTTTTCT
TGACTGTCTGAGTGAGAAATATATATTACTATTTTATCTATCTATTTCCA
CTACTACGCTCAACTATAGCTATTAAGTTCTTGGCTGTGCTACGCATGTG
TTTTCAATTCCAGGTATCATTCAAAGGCACCGAGTATACCTTGCTATCTA
ATTCTACTACTAGAGGCTCACAAAGTTTAAGGGATCTAAAGAGTGCCATC
CATAGTACTCCGTATCTACGAACGGAACTTCTTTTTATGAATCATGGACA
TGTC back to topCoding sequence (CDS) from alignment at ch8:2438400..2440803- >KJC3_012055-T1 ID=KJC3_012055-T1|Name=KJC3_012055-T1|organism=Aspergillus niger KJC3|type=CDS|length=4068bp|location=Sequence derived from alignment at ch8:2438400..2440803- (Aspergillus niger KJC3)
GTATCAACAACTCGAACTCAGACATGTCAAAGACTACGGTTGTGCGCCAG
CCATGGAGTTCCGTTGAGTCTTACCGAGGATCACCCTACTCTAACAACGT
TTTTTGAGGGCGAAATCATCGGAACCAAGCACACGTTTAAAACTAGAAAT
GAAGCATGGGGCGCGACCGAAAAGACTGACATGCAACATTGGGGACGGTT
TCCCGCTTGGCGATCGCAGGCGAAACAGGCGAAGAGACCGGATTTCACAT
TTCGAAATTTTGCCCAGCGTGAGCATCTCTTCATGCGTTGGAAAGAGTAC
TTCCTCGTTCCCGATCATCGCGTGAGGTCGATCTCCGGAGCCAGCTTCGA
AGGCTTCTACTACATATGTTTTAATCAGGTGGAGGGAACGGTTGCTGGGA
TTTACTTTCACGCCAAGAGCGAAAACTGTTACCCAATTATTCGTCGTCTT
TTTTGCGACCGGGAAGTAGATTTACTGGCACGCAGCAGTCAGACAGCCAT
GTCTACAGCGTTGATGTGGAGATCAAGCACGTTGATATGCTTGAATCTTA
TCTTTGTGGATACCTCCGCATACAAGATGCCGACTCCGAGTGATAACACC
CCGCCCTTGAATGCTTCAATCGCAGAAGAAATCTCCGCTCGCTCTACCTG
TCCCCCAGAGGTTGAAAGAGAGACATTACATACCAGAGAAGAAAGGCCGT
ATCCCTGGGTGTCGGCGTGGGAAAGGAGAAGCACCAGCGATGATGCTCCC
GACAACACGTTTTCGCCAACCGTCCCATCAAACCAGACCGCCTTAACGCC
ATCAGATGGAACTCCCTTTACTTCTACTGATGCGGACCCCGTGAGGGGCG
AGCCAGTAGCCAGAGCGCCCACGAAGGGCGTGGGTAGATCGGAAGATGAA
CCTGCTGCGGGGAGACTGAGCCCTGCTGCGGAGTCATCGTGCTCCTCCGG
CCCATCATCTCCAGTCACCCCTTCATCGGCCACTTCTCTACTAAGCTATG
AATTTTCTAACATTCGGGTATCAACAACTCGAACTCAGACATGTCAAAGA
CTACGGTTGTGCGCCAGCCATGGAGTTCCGTTGAGTCTTACCGAGGATCA
CCCTACTCTAACAACGTTTTTTGAGGGCGAAATCATCGGAACCAAGCACA
CGTTTAAAACTAGAAATGAAGCATGGGGCGCGACCGAAAAGACTGACATG
CAACATTGGGGACGGTTTCCCGCTTGGCGATCGCAGGCGAAACAGGCGAA
GAGACCGGATTTCACATTTCGAAATTTTGCCCAGCGTGAGCATCTCTTCA
TGCGTTGGAAAGAGTACTTCCTCGTTCCCGATCATCGCGTGAGGTCGATC
TCCGGAGCCAGCTTCGAAGGCTTCTACTACATATGTTTTAATCAGGTGGA
GGGAACGGTTGCTGGGATTTACTTTCACGCCAAGAGCGAAAACTGTTACC
CAATTATTCGTCGTCTTTTTTGCGACCGGGAAGTAGATTTACTGGCACGC
AGCAGTCAGACAGCCATGTCTACAGCGTTGATGTGGAGATCAAGCACGTT
GATATGCTTGAATCTTATCTTTGTGGATACCTCCGCATACAAGATGCCGA
CTCCGAGTGATAACACCCCGCCCTTGAATGCTTCAATCGCAGAAGAAATC
TCCGCTCGCTCTACCTGTCCCCCAGAGGTTGAAAGAGAGACATTACATAC
CAGAGAAGAAAGGCCGTATCCCTGGGTGTCGGCGTGGGAAAGGAGAAGCA
CCAGCGATGATGCTCCCGACAACACGTTTTCGCCAACCGTCCCATCAAAC
CAGACCGCCTTAACGCCATCAGATGGAACTCCCTTTACTTCTACTGATGC
GGACCCCGTGAGGGGCGAGCCAGTAGCCAGAGCGCCCACGAAGGGCGTGG
GTAGATCGGAAGATGAACCTGCTGCGGGGAGACTGAGCCCTGCTGCGGAG
TCATCGTGCTCCTCCGGCCCATCATCTCCAGTCACCCCTTCATCGGCCAC
TTCTCTACTAAGCTATGAATTTTCTAACATTCGGGTATCAACAACTCGAA
CTCAGACATGTCAAAGACTACGGTTGTGCGCCAGCCATGGAGTTCCGTTG
AGTCTTACCGAGGATCACCCTACTCTAACAACGTTTTTTGAGGGCGAAAT
CATCGGAACCAAGCACACGTTTAAAACTAGAAATGAAGCATGGGGCGCGA
CCGAAAAGACTGACATGCAACATTGGGGACGGTTTCCCGCTTGGCGATCG
CAGGCGAAACAGGCGAAGAGACCGGATTTCACATTTCGAAATTTTGCCCA
GCGTGAGCATCTCTTCATGCGTTGGAAAGAGTACTTCCTCGTTCCCGATC
ATCGCGTGAGGTCGATCTCCGGAGCCAGCTTCGAAGGCTTCTACTACATA
TGTTTTAATCAGGTGGAGGGAACGGTTGCTGGGATTTACTTTCACGCCAA
GAGCGAAAACTGTTACCCAATTATTCGTCGTCTTTTTTGCGACCGGGAAG
TAGATTTACTGGCACGCAGCAGTCAGACAGCCATGTCTACAGCGTTGATG
TGGAGATCAAGCACGTTGATATGCTTGAATCTTATCTTTGTGGATACCTC
CGCATACAAGATGCCGACTCCGAGTGATAACACCCCGCCCTTGAATGCTT
CAATCGCAGAAGAAATCTCCGCTCGCTCTACCTGTCCCCCAGAGGTTGAA
AGAGAGACATTACATACCAGAGAAGAAAGGCCGTATCCCTGGGTGTCGGC
GTGGGAAAGGAGAAGCACCAGCGATGATGCTCCCGACAACACGTTTTCGC
CAACCGTCCCATCAAACCAGACCGCCTTAACGCCATCAGATGGAACTCCC
TTTACTTCTACTGATGCGGACCCCGTGAGGGGCGAGCCAGTAGCCAGAGC
GCCCACGAAGGGCGTGGGTAGATCGGAAGATGAACCTGCTGCGGGGAGAC
TGAGCCCTGCTGCGGAGTCATCGTGCTCCTCCGGCCCATCATCTCCAGTC
ACCCCTTCATCGGCCACTTCTCTACTAAGCTATGAATTTTCTAACATTCG
GGTATCAACAACTCGAACTCAGACATGTCAAAGACTACGGTTGTGCGCCA
GCCATGGAGTTCCGTTGAGTCTTACCGAGGATCACCCTACTCTAACAACG
TTTTTTGAGGGCGAAATCATCGGAACCAAGCACACGTTTAAAACTAGAAA
TGAAGCATGGGGCGCGACCGAAAAGACTGACATGCAACATTGGGGACGGT
TTCCCGCTTGGCGATCGCAGGCGAAACAGGCGAAGAGACCGGATTTCACA
TTTCGAAATTTTGCCCAGCGTGAGCATCTCTTCATGCGTTGGAAAGAGTA
CTTCCTCGTTCCCGATCATCGCGTGAGGTCGATCTCCGGAGCCAGCTTCG
AAGGCTTCTACTACATATGTTTTAATCAGGTGGAGGGAACGGTTGCTGGG
ATTTACTTTCACGCCAAGAGCGAAAACTGTTACCCAATTATTCGTCGTCT
TTTTTGCGACCGGGAAGTAGATTTACTGGCACGCAGCAGTCAGACAGCCA
TGTCTACAGCGTTGATGTGGAGATCAAGCACGTTGATATGCTTGAATCTT
ATCTTTGTGGATACCTCCGCATACAAGATGCCGACTCCGAGTGATAACAC
CCCGCCCTTGAATGCTTCAATCGCAGAAGAAATCTCCGCTCGCTCTACCT
GTCCCCCAGAGGTTGAAAGAGAGACATTACATACCAGAGAAGAAAGGCCG
TATCCCTGGGTGTCGGCGTGGGAAAGGAGAAGCACCAGCGATGATGCTCC
CGACAACACGTTTTCGCCAACCGTCCCATCAAACCAGACCGCCTTAACGC
CATCAGATGGAACTCCCTTTACTTCTACTGATGCGGACCCCGTGAGGGGC
GAGCCAGTAGCCAGAGCGCCCACGAAGGGCGTGGGTAGATCGGAAGATGA
ACCTGCTGCGGGGAGACTGAGCCCTGCTGCGGAGTCATCGTGCTCCTCCG
GCCCATCATCTCCAGTCACCCCTTCATCGGCCACTTCTCTACTAAGCTAT
GAATTTTCTAACATTCGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012055-T1.utr3p1 | KJC3_012055-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012055-T1.utr5p1 | KJC3_012055-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092648U2 |
| DBxref | InterPro:IPR018618 |
| DBxref | PFAM:PF09783 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch8 | supercontig | ch8:2438400..2440803 - |
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