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KJC3_012059-T1, KJC3_012059-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012059-T1
Unique NameKJC3_012059-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2448732..2450043-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012059-T1 ID=KJC3_012059-T1|Name=KJC3_012059-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1312bp|location=Sequence derived from alignment at ch8:2448732..2450043- (Aspergillus niger KJC3)
AAGGACTTCCCCAAACCACCATTGTCCAGAGACCACCAAGGAATCTTACG
CTCTGGAAAGCGCAGGCACATCAATCGCCTCGCTCCCGCGAACATCACAA
GCCCAAGGGCTCATCCCCCCCAGCTACCGCACTCGAACAATCTATTCCTG
AACTGGAACCACCACCAACAAGCACAACCATGTCCGACGTGACCAAGACT
CCCTTCGTACGGGATCTCGCCTCGAGCGGTACATACCTCACCCATCCGTC
CAATTCGTACGTCCAGAAAACCAAATCTAACGAAGTAAAACTACAGAGAA
GAAAATCCGCGACAAAGCCACCGACTCTCTCTCACTCTTCCTCCGCTCCA
AAACCGACCTCTCCCTCATCGACCTCCTCAAACTATGGAAGGGTCTATTC
TTCTGTACGCTACATCTCTTCCCCAAATATCACACCGCCACAAACACCAA
CTAATCATATATTTAACCAGGCTTCTACCACTCCGACCGTCCCCTAACGC
AACAAGCACTCGCCCGCACTCTCAGCTACAGCCTGGTCCCGACGCTCCCC
CGAAGCACGCTGCATCGCTTCCTCCGCGCCTTCTGGATAACCATTGGACG
GGACTTCCACTCACTCGACCGTCTCCGTCTAGACAAGTACCTATTCCTGA
TCCGTTGCTACGTGGGCGTTGCATTTGAGGTGTTCCTCAAGCCCCAGCAA
TCCTCCACCTCCAGCACCACATCCACAAACGGCGGCAAGCGCAAAAGAGA
AGAAGAGCCTACATCATCAAAGCGGAATAAGAAGAACAACAAGAACAAGA
AACAAACCCAACAAGAAGAATCCACATCATCAGCAACCACCGCAGAAGAA
AAAGACTGGTCCGCCCTCGAATCCTACATCACCATCATCGAAGAAGGACC
CTTGTGCCCTCTGAACTTTGACCCGGATCAACCGCCCATGAACGAGAAGG
AAGATTACGTGCCCATGCCGCATGGACCGGACGGATTGCGGTACCATGTG
ATGGATATCTGGATTGATGAGTTGGAGAAAGTATTGGAGTTCGAGGAGGG
AGAGGAAGAGGGGCAACCGAAGAAGAAGGTCAAGGGCGGAGTGCCGATGG
AGCTTTTGTTGAGGCCGATTGAGAAGTTGAAGGCGGAGAGTGGGTATAAG
CCTGTGCGGACTCGGGCTGCGGAGACGCTGGATGATGAGCGGTTGGTTGA
GTGGGGGGTTAAGGAGAGGAAGGTGGTGGAGGAGAGTAGTGATGAGGAGT
GGGATGGGTTTGATTGAGCTGTTGATATTTGTCTGTATAAATTCTAATGG
CTCTTGCATTTT
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Coding sequence (CDS) from alignment at ch8:2448732..2450043-

>KJC3_012059-T1 ID=KJC3_012059-T1|Name=KJC3_012059-T1|organism=Aspergillus niger KJC3|type=CDS|length=2862bp|location=Sequence derived from alignment at ch8:2448732..2450043- (Aspergillus niger KJC3)
GCTTCTACCACTCCGACCGTCCCCTAACGCAACAAGCACTCGCCCGCACT
CTCAGCTACAGCCTGGTCCCGACGCTCCCCCGAAGCACGCTGCATCGCTT
CCTCCGCGCCTTCTGGATAACCATTGGACGGGACTTCCACTCACTCGACC
GTCTCCGTCTAGACAAGTACCTATTCCTGATCCGTTGCTACGTGGGCGTT
GCATTTGAGGTGTTCCTCAAGCCCCAGCAATCCTCCACCTCCAGCACCAC
ATCCACAAACGGCGGCAAGCGCAAAAGAGAAGAAGAGCCTACATCATCAA
AGCGGAATAAGAAGAACAACAAGAACAAGAAACAAACCCAACAAGAAGAA
TCCACATCATCAGCAACCACCGCAGAAGAAAAAGACTGGTCCGCCCTCGA
ATCCTACATCACCATCATCGAAGAAGGACCCTTGTGCCCTCTGAACTTTG
ACCCGGATCAACCGCCCATGAACGAGAAGGAAGATTACGTGCCCATGCCG
CATGGACCGGACGGATTGCGGTACCATGTGATGGATATCTGGATTGATGA
GTTGGAGAAAGTATTGGAGTTCGAGGAGGGAGAGGAAGAGGGGCAACCGA
AGAAGAAGGTCAAGGGCGGAGTGCCGATGGAGCTTTTGTTGAGGCCGATT
GAGAAGTTGAAGGCGGAGAGTGGGTATAAGCCTGTGCGGACTCGGGCTGC
GGAGACGCTGGATGATGAGCGGTTGGTTGAGTGGGGGGTTAAGGAGAGGA
AGGTGGTGGAGGAGAGTAGTGATGAGGAGTGGGATGGGTTTGATTGAAGA
AGAAAATCCGCGACAAAGCCACCGACTCTCTCTCACTCTTCCTCCGCTCC
AAAACCGACCTCTCCCTCATCGACCTCCTCAAACTATGGAAGGGTCTATT
CTTCTATGTCCGACGTGACCAAGACTCCCTTCGTACGGGATCTCGCCTCG
AGCGGCTTCTACCACTCCGACCGTCCCCTAACGCAACAAGCACTCGCCCG
CACTCTCAGCTACAGCCTGGTCCCGACGCTCCCCCGAAGCACGCTGCATC
GCTTCCTCCGCGCCTTCTGGATAACCATTGGACGGGACTTCCACTCACTC
GACCGTCTCCGTCTAGACAAGTACCTATTCCTGATCCGTTGCTACGTGGG
CGTTGCATTTGAGGTGTTCCTCAAGCCCCAGCAATCCTCCACCTCCAGCA
CCACATCCACAAACGGCGGCAAGCGCAAAAGAGAAGAAGAGCCTACATCA
TCAAAGCGGAATAAGAAGAACAACAAGAACAAGAAACAAACCCAACAAGA
AGAATCCACATCATCAGCAACCACCGCAGAAGAAAAAGACTGGTCCGCCC
TCGAATCCTACATCACCATCATCGAAGAAGGACCCTTGTGCCCTCTGAAC
TTTGACCCGGATCAACCGCCCATGAACGAGAAGGAAGATTACGTGCCCAT
GCCGCATGGACCGGACGGATTGCGGTACCATGTGATGGATATCTGGATTG
ATGAGTTGGAGAAAGTATTGGAGTTCGAGGAGGGAGAGGAAGAGGGGCAA
CCGAAGAAGAAGGTCAAGGGCGGAGTGCCGATGGAGCTTTTGTTGAGGCC
GATTGAGAAGTTGAAGGCGGAGAGTGGGTATAAGCCTGTGCGGACTCGGG
CTGCGGAGACGCTGGATGATGAGCGGTTGGTTGAGTGGGGGGTTAAGGAG
AGGAAGGTGGTGGAGGAGAGTAGTGATGAGGAGTGGGATGGGTTTGATTG
AAGAAGAAAATCCGCGACAAAGCCACCGACTCTCTCTCACTCTTCCTCCG
CTCCAAAACCGACCTCTCCCTCATCGACCTCCTCAAACTATGGAAGGGTC
TATTCTTCTATGTCCGACGTGACCAAGACTCCCTTCGTACGGGATCTCGC
CTCGAGCGGCTTCTACCACTCCGACCGTCCCCTAACGCAACAAGCACTCG
CCCGCACTCTCAGCTACAGCCTGGTCCCGACGCTCCCCCGAAGCACGCTG
CATCGCTTCCTCCGCGCCTTCTGGATAACCATTGGACGGGACTTCCACTC
ACTCGACCGTCTCCGTCTAGACAAGTACCTATTCCTGATCCGTTGCTACG
TGGGCGTTGCATTTGAGGTGTTCCTCAAGCCCCAGCAATCCTCCACCTCC
AGCACCACATCCACAAACGGCGGCAAGCGCAAAAGAGAAGAAGAGCCTAC
ATCATCAAAGCGGAATAAGAAGAACAACAAGAACAAGAAACAAACCCAAC
AAGAAGAATCCACATCATCAGCAACCACCGCAGAAGAAAAAGACTGGTCC
GCCCTCGAATCCTACATCACCATCATCGAAGAAGGACCCTTGTGCCCTCT
GAACTTTGACCCGGATCAACCGCCCATGAACGAGAAGGAAGATTACGTGC
CCATGCCGCATGGACCGGACGGATTGCGGTACCATGTGATGGATATCTGG
ATTGATGAGTTGGAGAAAGTATTGGAGTTCGAGGAGGGAGAGGAAGAGGG
GCAACCGAAGAAGAAGGTCAAGGGCGGAGTGCCGATGGAGCTTTTGTTGA
GGCCGATTGAGAAGTTGAAGGCGGAGAGTGGGTATAAGCCTGTGCGGACT
CGGGCTGCGGAGACGCTGGATGATGAGCGGTTGGTTGAGTGGGGGGTTAA
GGAGAGGAAGGTGGTGGAGGAGAGTAGTGATGAGGAGTGGGATGGGTTTG
ATTGAAGAAGAAAATCCGCGACAAAGCCACCGACTCTCTCTCACTCTTCC
TCCGCTCCAAAACCGACCTCTCCCTCATCGACCTCCTCAAACTATGGAAG
GGTCTATTCTTCTATGTCCGACGTGACCAAGACTCCCTTCGTACGGGATC
TCGCCTCGAGCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030688preribosome, small subunit precursor
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012059KJC3_012059Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012059-T1KJC3_012059-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012059-T1.cdsKJC3_012059-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012059-T1.utr3p1KJC3_012059-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012059-T1.exon3KJC3_012059-T1.exon3Aspergillus niger KJC3exon
KJC3_012059-T1.exon2KJC3_012059-T1.exon2Aspergillus niger KJC3exon
KJC3_012059-T1.exon1KJC3_012059-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012059-T1.utr5p1KJC3_012059-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092646C6
DBxrefInterPro:IPR010301
DBxrefPFAM:PF05997
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2448732..2450043 -
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