|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2470149..2472580+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012067-T1 ID=KJC3_012067-T1|Name=KJC3_012067-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2432bp|location=Sequence derived from alignment at ch8:2470149..2472580+ (Aspergillus niger KJC3)
ATGTTGTCCTCTATAGGCGTGTCATTCTTGTGGTAGTCATTTTACCTATG
AATTTACTACTGCTACAAAGCTGAGTACTTGTTGCATCTGCCACCATGGT
CATCGATCTTACGGTCGACTCAGACTCAGAGGAGAGAAATGAGGTAAGTT
GCACTTTTATGCATTTCCGCCCTTTCAAAATTGTTTGGCGTCGTGTTATT
TTGGTGTTGTTTTTGCGGCTAGTTGTCTATCTACTTTTGTATGAGGGAGC
GGCTATACTGCATTGCATGGATGTCCTCTGTTGTGCGCACTTGTACCAAT
GCCACAACATCTTTTTTAAATTGGAAATTTCCTTTCTTTTTTTGTTTCTT
GTCAAAAGAGATTGGAATCTGACAGTCTCGCACTTGTTTTTTTCTCTGTT
ATATGTTCTTGTGACCTTCACAATTTTGCTTCACTTTATTCACTGCGCAA
CCCCTGCTATAGTTCGTGAGAGGATCAGCTGACTTGATACATCTAGAATC
ATGTGCCATCTTCAGCACCACCTCTTCAGAACAACACCCCCAAGTCTCCT
TCCACTCTCACCCACCGCCCTGCGTCCTCAGTTCCCTTGAAAAGGAAATC
TGAAGATGCAGAGGAACTGCTGGCATCCTTCCTGCCCCGCCGGCCGCAAT
CACAGCCGCGGTCTTTTTCCCAACCACAGTCGGCAAACCGCGCCAATCAG
CACGCCATCTCTATCGAAATAGAGGATGACGATGATGATGACGAGGATGT
CAAGCCTGTTCAGATTCGGCGCAGAGTTACAGCTGCTCGAACCTCCTCCT
TTAATCCTAACGCCATCTCTGCTAGTAAGGAAAACAGACCTCTGCAGATC
AAGTCTAATGCAACATCTACTCGCTCATCGTCACCCTTCAATCTCACGAC
CACCAATCACGATCACCGCCGCAGCCAAGACCGGGATGAAGACAGAAAGC
AGAGATCCCTCTTAAGCACCCGTCGGTCCATATCATTTCAAACCCCCAGT
CCCGGCCCTATCTCTCTCAGCGTAGTAATTCCCTCGCCTTCTCGGCGCCA
GCAACAAGAACTCGATTCAGCCGAAGTGATCTCCGTCCCTTCTCCAATTG
GCCTCTCCGAGAACTTCTATCCAACCGACGCATATGAGAAACGCGCCTTG
AAAGGCGCATACCCTGTGGCCCGAAAAGTCAATCGAGCAGCCATCCCATT
CACTATCGGCGCCCCTGGTCCGCTGTTGACTTCTAAGCCGGATATCAGCG
CACAGCTGCACCAAACCCTGCAGCAGAAGCTCGCAAAGATCCGAGGCCCC
AAAGTAACCTTTGCATCTGGGGACCAGCACCAGCTAGCGCAGTTCGCAGC
CAACTTTGAGTTCGTTAATGCATACAAGCTACGACAAGGGGTCACGCCTG
TTCCAGAGGAGTTCCTTGCGGGATGTAGCTGTGACGGATTCTGCGATCCA
GCAAGATGTCTTTGTCTCAGCAAAGAAGAGGAGACCAATGACCCAATGGT
GCCGTATAAGCGGGCTGACGATGATGGGCGATTGTTGGTTCTCACCCCGG
AGTTCCTAAAACGAAAAGCCATGATCTACGAGTGTAGTTCGAGATGTGGA
TGTGATGAGCGGTGCTGGAATCGGGTGGTGCAGAATGGCCGGACGGTACG
GCTAGAGATTTTCCAGACCGGTAATCGAGGGTTCGGTATGTCACAGGCCA
TATTCATTTTAGACGTATAAATACTAATCAAGAAAAAAGGCCTCCGCTCC
CCCGACCACATTCGCGCAGGTCAATTCATCGACTGCTACCTCGGGGAGGT
CATCACCAAAGAAGTGGCCGACATCCGCGAAGACGTCGCGACATCTCAAA
ACAGACACTCGTATCTATTCAGTCTCGACTTTCTCGCCACCGGCGAAGAC
AGCAAATACGTAGTAGACGGACACAAATTCGGTGGTCCAACGCGATTCAT
GAATCACTCATGCAACCCTAACTGTCGCATGATTACCGTGACCCGCAACC
ACGCTGACGATTACCTGTACGACTTGGCTTTCTTCGCTTTTAAAGATGTG
CCGCCTATGACGGAACTGACATTTGATTATAATCCCGGCTGGGAGAAAGT
CAAGAAAGTTGATCCGAATGCCGTTCCTTGCCTCTGTGGGGAGAGTAATT
GTCGAGGTCAGCTGTGGCCGAATCAGAGGAAGGCGAAGAGGGGGTGATTC
TTCTCCTTCAATTCCTTTTCTCTATGCGGACTTTCTTTCGACGTACACTT
CGTTGACTTCATATTATGATATGATATCATATGCCATTGCATGAGAGTGC
GCGTTAAGTTGATGAACTGCATGTCTGGAATTTCTTGAGGAGGTGAGGTA
CATGCGATCATCGTTTCTATATGGGAGTTGGGCATCTTTCTTGAGTTCTT
GCCTTGCATTGCATCATCTATGTATTCTCTGG back to topCoding sequence (CDS) from alignment at ch8:2470149..2472580+ >KJC3_012067-T1 ID=KJC3_012067-T1|Name=KJC3_012067-T1|organism=Aspergillus niger KJC3|type=CDS|length=5085bp|location=Sequence derived from alignment at ch8:2470149..2472580+ (Aspergillus niger KJC3)
ATGGTCATCGATCTTACGGTCGACTCAGACTCAGAGGAGAGAAATGAGAA
TCATGTGCCATCTTCAGCACCACCTCTTCAGAACAACACCCCCAAGTCTC
CTTCCACTCTCACCCACCGCCCTGCGTCCTCAGTTCCCTTGAAAAGGAAA
TCTGAAGATGCAGAGGAACTGCTGGCATCCTTCCTGCCCCGCCGGCCGCA
ATCACAGCCGCGGTCTTTTTCCCAACCACAGTCGGCAAACCGCGCCAATC
AGCACGCCATCTCTATCGAAATAGAGGATGACGATGATGATGACGAGGAT
GTCAAGCCTGTTCAGATTCGGCGCAGAGTTACAGCTGCTCGAACCTCCTC
CTTTAATCCTAACGCCATCTCTGCTAGTAAGGAAAACAGACCTCTGCAGA
TCAAGTCTAATGCAACATCTACTCGCTCATCGTCACCCTTCAATCTCACG
ACCACCAATCACGATCACCGCCGCAGCCAAGACCGGGATGAAGACAGAAA
GCAGAGATCCCTCTTAAGCACCCGTCGGTCCATATCATTTCAAACCCCCA
GTCCCGGCCCTATCTCTCTCAGCGTAGTAATTCCCTCGCCTTCTCGGCGC
CAGCAACAAGAACTCGATTCAGCCGAAGTGATCTCCGTCCCTTCTCCAAT
TGGCCTCTCCGAGAACTTCTATCCAACCGACGCATATGAGAAACGCGCCT
TGAAAGGCGCATACCCTGTGGCCCGAAAAGTCAATCGAGCAGCCATCCCA
TTCACTATCGGCGCCCCTGGTCCGCTGTTGACTTCTAAGCCGGATATCAG
CGCACAGCTGCACCAAACCCTGCAGCAGAAGCTCGCAAAGATCCGAGGCC
CCAAAGTAACCTTTGCATCTGGGGACCAGCACCAGCTAGCGCAGTTCGCA
GCCAACTTTGAGTTCGTTAATGCATACAAGCTACGACAAGGGGTCACGCC
TGTTCCAGAGGAGTTCCTTGCGGGATGTAGCTGTGACGGATTCTGCGATC
CAGCAAGATGTCTTTGTCTCAGCAAAGAAGAGGAGACCAATGACCCAATG
GTGCCGTATAAGCGGGCTGACGATGATGGGCGATTGTTGGTTCTCACCCC
GGAGTTCCTAAAACGAAAAGCCATGATCTACGAGTGTAGTTCGAGATGTG
GATGTGATGAGCGGTGCTGGAATCGGGTGGTGCAGAATGGCCGGACGGTA
CGGCTAGAGATTTTCCAGACCGGTAATCGAGGGTTCGGCCTCCGCTCCCC
CGACCACATTCGCGCAGGTCAATTCATCGACTGCTACCTCGGGGAGGTCA
TCACCAAAGAAGTGGCCGACATCCGCGAAGACGTCGCGACATCTCAAAAC
AGACACTCGTATCTATTCAGTCTCGACTTTCTCGCCACCGGCGAAGACAG
CAAATACGTAGTAGACGGACACAAATTCGGTGGTCCAACGCGATTCATGA
ATCACTCATGCAACCCTAACTGTCGCATGATTACCGTGACCCGCAACCAC
GCTGACGATTACCTGTACGACTTGGCTTTCTTCGCTTTTAAAGATGTGCC
GCCTATGACGGAACTGACATTTGATTATAATCCCGGCTGGGAGAAAGTCA
AGAAAGTTGATCCGAATGCCGTTCCTTGCCTCTGTGGGGAGAGTAATTGT
CGAGGTCAGCTGTGGCCGAATCAGAGGAAGGCGAAGAGGGGGTGAATGGT
CATCGATCTTACGGTCGACTCAGACTCAGAGGAGAGAAATGAGAATCATG
TGCCATCTTCAGCACCACCTCTTCAGAACAACACCCCCAAGTCTCCTTCC
ACTCTCACCCACCGCCCTGCGTCCTCAGTTCCCTTGAAAAGGAAATCTGA
AGATGCAGAGGAACTGCTGGCATCCTTCCTGCCCCGCCGGCCGCAATCAC
AGCCGCGGTCTTTTTCCCAACCACAGTCGGCAAACCGCGCCAATCAGCAC
GCCATCTCTATCGAAATAGAGGATGACGATGATGATGACGAGGATGTCAA
GCCTGTTCAGATTCGGCGCAGAGTTACAGCTGCTCGAACCTCCTCCTTTA
ATCCTAACGCCATCTCTGCTAGTAAGGAAAACAGACCTCTGCAGATCAAG
TCTAATGCAACATCTACTCGCTCATCGTCACCCTTCAATCTCACGACCAC
CAATCACGATCACCGCCGCAGCCAAGACCGGGATGAAGACAGAAAGCAGA
GATCCCTCTTAAGCACCCGTCGGTCCATATCATTTCAAACCCCCAGTCCC
GGCCCTATCTCTCTCAGCGTAGTAATTCCCTCGCCTTCTCGGCGCCAGCA
ACAAGAACTCGATTCAGCCGAAGTGATCTCCGTCCCTTCTCCAATTGGCC
TCTCCGAGAACTTCTATCCAACCGACGCATATGAGAAACGCGCCTTGAAA
GGCGCATACCCTGTGGCCCGAAAAGTCAATCGAGCAGCCATCCCATTCAC
TATCGGCGCCCCTGGTCCGCTGTTGACTTCTAAGCCGGATATCAGCGCAC
AGCTGCACCAAACCCTGCAGCAGAAGCTCGCAAAGATCCGAGGCCCCAAA
GTAACCTTTGCATCTGGGGACCAGCACCAGCTAGCGCAGTTCGCAGCCAA
CTTTGAGTTCGTTAATGCATACAAGCTACGACAAGGGGTCACGCCTGTTC
CAGAGGAGTTCCTTGCGGGATGTAGCTGTGACGGATTCTGCGATCCAGCA
AGATGTCTTTGTCTCAGCAAAGAAGAGGAGACCAATGACCCAATGGTGCC
GTATAAGCGGGCTGACGATGATGGGCGATTGTTGGTTCTCACCCCGGAGT
TCCTAAAACGAAAAGCCATGATCTACGAGTGTAGTTCGAGATGTGGATGT
GATGAGCGGTGCTGGAATCGGGTGGTGCAGAATGGCCGGACGGTACGGCT
AGAGATTTTCCAGACCGGTAATCGAGGGTTCGGCCTCCGCTCCCCCGACC
ACATTCGCGCAGGTCAATTCATCGACTGCTACCTCGGGGAGGTCATCACC
AAAGAAGTGGCCGACATCCGCGAAGACGTCGCGACATCTCAAAACAGACA
CTCGTATCTATTCAGTCTCGACTTTCTCGCCACCGGCGAAGACAGCAAAT
ACGTAGTAGACGGACACAAATTCGGTGGTCCAACGCGATTCATGAATCAC
TCATGCAACCCTAACTGTCGCATGATTACCGTGACCCGCAACCACGCTGA
CGATTACCTGTACGACTTGGCTTTCTTCGCTTTTAAAGATGTGCCGCCTA
TGACGGAACTGACATTTGATTATAATCCCGGCTGGGAGAAAGTCAAGAAA
GTTGATCCGAATGCCGTTCCTTGCCTCTGTGGGGAGAGTAATTGTCGAGG
TCAGCTGTGGCCGAATCAGAGGAAGGCGAAGAGGGGGTGAATGGTCATCG
ATCTTACGGTCGACTCAGACTCAGAGGAGAGAAATGAGAATCATGTGCCA
TCTTCAGCACCACCTCTTCAGAACAACACCCCCAAGTCTCCTTCCACTCT
CACCCACCGCCCTGCGTCCTCAGTTCCCTTGAAAAGGAAATCTGAAGATG
CAGAGGAACTGCTGGCATCCTTCCTGCCCCGCCGGCCGCAATCACAGCCG
CGGTCTTTTTCCCAACCACAGTCGGCAAACCGCGCCAATCAGCACGCCAT
CTCTATCGAAATAGAGGATGACGATGATGATGACGAGGATGTCAAGCCTG
TTCAGATTCGGCGCAGAGTTACAGCTGCTCGAACCTCCTCCTTTAATCCT
AACGCCATCTCTGCTAGTAAGGAAAACAGACCTCTGCAGATCAAGTCTAA
TGCAACATCTACTCGCTCATCGTCACCCTTCAATCTCACGACCACCAATC
ACGATCACCGCCGCAGCCAAGACCGGGATGAAGACAGAAAGCAGAGATCC
CTCTTAAGCACCCGTCGGTCCATATCATTTCAAACCCCCAGTCCCGGCCC
TATCTCTCTCAGCGTAGTAATTCCCTCGCCTTCTCGGCGCCAGCAACAAG
AACTCGATTCAGCCGAAGTGATCTCCGTCCCTTCTCCAATTGGCCTCTCC
GAGAACTTCTATCCAACCGACGCATATGAGAAACGCGCCTTGAAAGGCGC
ATACCCTGTGGCCCGAAAAGTCAATCGAGCAGCCATCCCATTCACTATCG
GCGCCCCTGGTCCGCTGTTGACTTCTAAGCCGGATATCAGCGCACAGCTG
CACCAAACCCTGCAGCAGAAGCTCGCAAAGATCCGAGGCCCCAAAGTAAC
CTTTGCATCTGGGGACCAGCACCAGCTAGCGCAGTTCGCAGCCAACTTTG
AGTTCGTTAATGCATACAAGCTACGACAAGGGGTCACGCCTGTTCCAGAG
GAGTTCCTTGCGGGATGTAGCTGTGACGGATTCTGCGATCCAGCAAGATG
TCTTTGTCTCAGCAAAGAAGAGGAGACCAATGACCCAATGGTGCCGTATA
AGCGGGCTGACGATGATGGGCGATTGTTGGTTCTCACCCCGGAGTTCCTA
AAACGAAAAGCCATGATCTACGAGTGTAGTTCGAGATGTGGATGTGATGA
GCGGTGCTGGAATCGGGTGGTGCAGAATGGCCGGACGGTACGGCTAGAGA
TTTTCCAGACCGGTAATCGAGGGTTCGGCCTCCGCTCCCCCGACCACATT
CGCGCAGGTCAATTCATCGACTGCTACCTCGGGGAGGTCATCACCAAAGA
AGTGGCCGACATCCGCGAAGACGTCGCGACATCTCAAAACAGACACTCGT
ATCTATTCAGTCTCGACTTTCTCGCCACCGGCGAAGACAGCAAATACGTA
GTAGACGGACACAAATTCGGTGGTCCAACGCGATTCATGAATCACTCATG
CAACCCTAACTGTCGCATGATTACCGTGACCCGCAACCACGCTGACGATT
ACCTGTACGACTTGGCTTTCTTCGCTTTTAAAGATGTGCCGCCTATGACG
GAACTGACATTTGATTATAATCCCGGCTGGGAGAAAGTCAAGAAAGTTGA
TCCGAATGCCGTTCCTTGCCTCTGTGGGGAGAGTAATTGTCGAGGTCAGC
TGTGGCCGAATCAGAGGAAGGCGAAGAGGGGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0034968 | histone lysine methylation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0018024 | histone-lysine N-methyltransferase activity |
| GO:0008270 | zinc ion binding |
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012067-T1.utr5p1 | KJC3_012067-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012067-T1.utr3p1 | KJC3_012067-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003616 |
| DBxref | InterPro:IPR007728 |
| DBxref | InterPro:IPR001214 |
| DBxref | PFAM:PF00856 |
| DBxref | PFAM:PF05033 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2470149..2472580 + |
|
