You are here

Home

KJC3_012072-T1, KJC3_012072-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012072-T1
Unique NameKJC3_012072-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2486897..2488032-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012072-T1 ID=KJC3_012072-T1|Name=KJC3_012072-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1136bp|location=Sequence derived from alignment at ch8:2486897..2488032- (Aspergillus niger KJC3)
ATGAACCGGGTCTTGGCTCTCCCAGCTCTGTTCTTTTGCCTCTTCACCTA
CACCCCCTCCTACACCACCTTCAACTTGATCTTCTTTTACATGACATGGA
CAACTCTCATCCTGTCGCATTCCCCTTTTAAGGTAGAACTGTTCGGCTCC
ATAGGCGTACGACTGCTGTTCTACATCCTCCCCTCGGCGCTGCTTTTCCT
ATTCGATGCGCTTGTCCCCTCCGCCGCCGTACTGCTCAAGGCGCATGGTG
AACAGGGCCTACCGACAGGAAGCAAGAGACGAGGAGTTCGAGTTCGAGAG
ATTAAAGTCGCAGGATGGTCATTCCTCAACATTTTCATAAGCATCGCCGT
GCAAGCTGCCATCGAAACTCTTCGCATCGGGTATTTCAATACGCGCAGTG
CCCTCAAAGTATCCTTTACGATCCCTATCATACCTTGGAACATTGCCTTT
CATCTCGCGTGTGTCCTACTACTCCGAGAGGTAAGTCCTATTTCGAAATG
CCCACACTTCCCAGTGTTGGCGATCACCCGTAACAACACTCACTAATCAC
GCGCGCGCACAACTTCCAGATCCTCGCATACACCATCCACCGCTTCGTCC
TCCATAATGACAAATACCGCATCACGCGCTACATCTCCTCCCTCCACCAA
ACCTGGTACCACTCGCTTCACGCGCCCTACCCTTCCACCGCCCACTACGA
CCATCCTATTCCCTACCTCCTCGGAAATACCGTCCCCACATTACTCCCCG
CTGTATTCCTCCGCCTCCACATGATCACCTACGCCATGTACTTGAGCATT
GTCTCGCTGGAAGAGACTCTAGCATACTCGGGATACTCTGCCATGCCGAT
GGACTTCTTCCTCTTGGGCGGGATCGCTCGTCGAGTCGAGAAGCATCTGC
TGAATCGCGCGGCCGGGAATTTCGGCCCCTGGGGTATTGCGGACTGGTTC
TGTCAGACTACGATTGGGGATGAAGAGGGTGAGGTGCTGATAGCGGACAC
AGAGGATGATGAGGATGAGCCTACACCTGTTCTTAGGGGGAAGGAGATCT
TTGAGGCCAAGTTGCAGGAGGCGTTGGATTCGCATGCTAAGAAGACGCAG
AGGAAGCATAAGAAAAAGTTGAAGCAGAACTTGTGA
back to top

Coding sequence (CDS) from alignment at ch8:2486897..2488032-

>KJC3_012072-T1 ID=KJC3_012072-T1|Name=KJC3_012072-T1|organism=Aspergillus niger KJC3|type=CDS|length=2094bp|location=Sequence derived from alignment at ch8:2486897..2488032- (Aspergillus niger KJC3)
ATCCTCGCATACACCATCCACCGCTTCGTCCTCCATAATGACAAATACCG
CATCACGCGCTACATCTCCTCCCTCCACCAAACCTGGTACCACTCGCTTC
ACGCGCCCTACCCTTCCACCGCCCACTACGACCATCCTATTCCCTACCTC
CTCGGAAATACCGTCCCCACATTACTCCCCGCTGTATTCCTCCGCCTCCA
CATGATCACCTACGCCATGTACTTGAGCATTGTCTCGCTGGAAGAGACTC
TAGCATACTCGGGATACTCTGCCATGCCGATGGACTTCTTCCTCTTGGGC
GGGATCGCTCGTCGAGTCGAGAAGCATCTGCTGAATCGCGCGGCCGGGAA
TTTCGGCCCCTGGGGTATTGCGGACTGGTTCTGTCAGACTACGATTGGGG
ATGAAGAGGGTGAGGTGCTGATAGCGGACACAGAGGATGATGAGGATGAG
CCTACACCTGTTCTTAGGGGGAAGGAGATCTTTGAGGCCAAGTTGCAGGA
GGCGTTGGATTCGCATGCTAAGAAGACGCAGAGGAAGCATAAGAAAAAGT
TGAAGCAGAACTTGTGAATGAACCGGGTCTTGGCTCTCCCAGCTCTGTTC
TTTTGCCTCTTCACCTACACCCCCTCCTACACCACCTTCAACTTGATCTT
CTTTTACATGACATGGACAACTCTCATCCTGTCGCATTCCCCTTTTAAGG
TAGAACTGTTCGGCTCCATAGGCGTACGACTGCTGTTCTACATCCTCCCC
TCGGCGCTGCTTTTCCTATTCGATGCGCTTGTCCCCTCCGCCGCCGTACT
GCTCAAGGCGCATGGTGAACAGGGCCTACCGACAGGAAGCAAGAGACGAG
GAGTTCGAGTTCGAGAGATTAAAGTCGCAGGATGGTCATTCCTCAACATT
TTCATAAGCATCGCCGTGCAAGCTGCCATCGAAACTCTTCGCATCGGGTA
TTTCAATACGCGCAGTGCCCTCAAAGTATCCTTTACGATCCCTATCATAC
CTTGGAACATTGCCTTTCATCTCGCGTGTGTCCTACTACTCCGAGAGATC
CTCGCATACACCATCCACCGCTTCGTCCTCCATAATGACAAATACCGCAT
CACGCGCTACATCTCCTCCCTCCACCAAACCTGGTACCACTCGCTTCACG
CGCCCTACCCTTCCACCGCCCACTACGACCATCCTATTCCCTACCTCCTC
GGAAATACCGTCCCCACATTACTCCCCGCTGTATTCCTCCGCCTCCACAT
GATCACCTACGCCATGTACTTGAGCATTGTCTCGCTGGAAGAGACTCTAG
CATACTCGGGATACTCTGCCATGCCGATGGACTTCTTCCTCTTGGGCGGG
ATCGCTCGTCGAGTCGAGAAGCATCTGCTGAATCGCGCGGCCGGGAATTT
CGGCCCCTGGGGTATTGCGGACTGGTTCTGTCAGACTACGATTGGGGATG
AAGAGGGTGAGGTGCTGATAGCGGACACAGAGGATGATGAGGATGAGCCT
ACACCTGTTCTTAGGGGGAAGGAGATCTTTGAGGCCAAGTTGCAGGAGGC
GTTGGATTCGCATGCTAAGAAGACGCAGAGGAAGCATAAGAAAAAGTTGA
AGCAGAACTTGTGAATGAACCGGGTCTTGGCTCTCCCAGCTCTGTTCTTT
TGCCTCTTCACCTACACCCCCTCCTACACCACCTTCAACTTGATCTTCTT
TTACATGACATGGACAACTCTCATCCTGTCGCATTCCCCTTTTAAGGTAG
AACTGTTCGGCTCCATAGGCGTACGACTGCTGTTCTACATCCTCCCCTCG
GCGCTGCTTTTCCTATTCGATGCGCTTGTCCCCTCCGCCGCCGTACTGCT
CAAGGCGCATGGTGAACAGGGCCTACCGACAGGAAGCAAGAGACGAGGAG
TTCGAGTTCGAGAGATTAAAGTCGCAGGATGGTCATTCCTCAACATTTTC
ATAAGCATCGCCGTGCAAGCTGCCATCGAAACTCTTCGCATCGGGTATTT
CAATACGCGCAGTGCCCTCAAAGTATCCTTTACGATCCCTATCATACCTT
GGAACATTGCCTTTCATCTCGCGTGTGTCCTACTACTCCGAGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008610lipid biosynthetic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012072KJC3_012072Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012072-T1KJC3_012072-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012072-T1.cdsKJC3_012072-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012072-T1.exon2KJC3_012072-T1.exon2Aspergillus niger KJC3exon
KJC3_012072-T1.exon1KJC3_012072-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR006694
DBxrefPFAM:PF04116
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2486897..2488032 -
Powered by Drupal