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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2490205..2492399+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012074-T1 ID=KJC3_012074-T1|Name=KJC3_012074-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2195bp|location=Sequence derived from alignment at ch8:2490205..2492399+ (Aspergillus niger KJC3)
CTCTCTCATCCCCTCATACACAGTCTATCATGGGTAAAAAAAGAAAGGCC
GGCGGTCGCCCTGCGGCCCCCAAGGCGGACAAGCATGGTCCGTCCAAATT
CCACATCGAGGAGCGATTCGATGATTCGGAGGATGAGTTCCAGACTGGTC
GCGACCAAATCCTACTAGAAGAGGCGCCGGAAGCAAAGAGACGTCGGAGA
GTGGCTGAGGAAGGTTTGTTGTACAAAGCGCATGCTGTGGGTATGCTTAA
CTAACAGGTTTATGCTTCTAGAGGAACTTCTCCAGGCATCGGACGAAGAG
ATCATGGGTTACGAGGACGACGACGACGATGAAGACGATCTAGATCTCGA
TGATGAGGAAGACCTTGACGAAGGCGACGACTACGACGAGGATGACATGG
ATGGTATTCAGTCAAAATCCAAGTCGAAGCGCGGCGGCAGTCCGGGATCT
GAAGACGACGAGGAAGGTATCGCCGCTTGGGGTTCGTCCAAGAAGGACCT
TTACAGTGCGGATCAGATCGAAACGGAAGCAGACGCTCTTGAGGAGGAGG
AAGAAGCCAAGCGACTTCAGCAGAAGCATCTGCAGGCCATCAACGAGGAA
GACTTTGGCTTTGACGAATCTGAATGGGTTGAATCCGGCAAGGACCAGAA
GGATGCGGGGGATGGCGGTGAGGTGACAGAGGTTCTACCACAACTGGAGA
TTACGGAGGATATGAGCGAAGAGGAGAAGTTGAAGATACTCAAGTCCAGA
TATCCCGAGTTCGAACCCCTAGCGAAAGACTTTGCCGACCTTCAGTCCAC
GCATCAGGCTCTCGCCAAGGCCGCTCGGAGCTTCAATGCCAACGATGACT
CCGAAGATGCCCCGGATTCCGCACCTGTTGCAGTTGTCAAGTTCCGCGCT
CTGTCTGCTTACCTTGGTACGATCGGCATGTACTTTATGCTCCTGACCTC
TTCCACCGACGACTCCGGCAAGCCTGCTCCGCTATCGCCTGCTCAGCTAC
GAGCCCACCCAATAATGGGATCCCTAGTCAAGTTCAGGAAACTCTGGGAG
ACCGTCAAGAACCTTAGTGAACCCGAGCCGGAGGCATCAGAAGCCGAGGA
TGACTCCGAAGTTGATGAAATCATGTCCGACGCACCTACGGCCAAGCAAA
AGAGCAAGGGCAAGGAGGAGCAAACTTCCAAGAAGAACAAGAAGAAGACA
GAGAAGGTATCCAAGGCACAACGCGCAGCCGAGGCAGCACAAGCCGAGGC
AGAGGCTCGGCGAGCAGAGCGACTCCGACAGACCGAAGCCAACCTGGCCG
ATCTATCGAAGCTCGTTTCCGGATCGAGCAAGAAACGAGCCGCCCAGAAG
ACCAAATCGAGCAAGGAAGCCGACGACTCCGACTTCGGTGACGAAGACGC
CCTCACAGCCAAGGAAGCCGAAGAGAAGGCCAAGCAGAAGCGTTCTCTCC
GCTTCTACACATCTCAACTCGCACAGAAAGCCAACAAGCGTAACGCAGCC
GGTCGTGACGCAGGTGGTGATGCAGATCTTCCTTACCGTGAGCGTCTAAG
GGACCGCCAAGCCCGCCTGAATGCCGAAGCCGAGAGACGTGGTAAACAGA
AACTGAAGGACTCCGAGCAGCTGGGCGGCGACAGTGACGAGGAAGACCAC
CGGGTCGCCAAGCAGCTCCGCGGCGACGAAGGATCTGACGATGACGACTA
CTACGACATGGTCGCGGCTCGCGGCAAGCAGCGCAAGGACGACAAGAAGG
CGCGCGCTGACGCCTACGCTGCTGCGGCCCGTGAAGGCGGCCACGTTGAG
ATCCAGGAGGAAGTCGGCCCCGATGGCAAGCGTGCTATCACCTACCAGAT
CGAGAAGAACAAGGGTCTTGCGCCTAAGCGTAGCAAGGACTCTCGCAACC
CTCGTGTCAAGAAGAGAAAGAGATACGAGGAGAAGAAGAAGAAGCTCGGC
AGTATTCGCCAGGTGTACAAGGGTGGTGAAGGTCGTGGTGGATATGGTGG
TGAACTTACGGGTATCAAGAAGAACGTGGTCAAGAGTGTTAAGCTCTGAT
TCTAGTTCTTCTGGTTCTGTTTCTTGGTACTGCGGTAGCACAGTTGGAGA
CATACATTACTGGCGTTCAATGTGTGCGAAAATGGGTCTTTGTGTGTATA
TAGATAATCTTCTACTCGATGATACAAACTTTTGTCTGACTGTTC back to topCoding sequence (CDS) from alignment at ch8:2490205..2492399+ >KJC3_012074-T1 ID=KJC3_012074-T1|Name=KJC3_012074-T1|organism=Aspergillus niger KJC3|type=CDS|length=3924bp|location=Sequence derived from alignment at ch8:2490205..2492399+ (Aspergillus niger KJC3)
ATGGGTAAAAAAAGAAAGGCCGGCGGTCGCCCTGCGGCCCCCAAGGCGGA
CAAGCATGGTCCGTCCAAATTCCACATCGAGGAGCGATTCGATGATTCGG
AGGATGAGTTCCAGACTGGTCGCGACCAAATCCTACTAGAAGAGGCGCCG
GAAGCAAAGAGACGTCGGAGAGTGGCTGAGGAAGAGGAACTTCTCCAGGC
ATCGGACGAAGAGATCATGGGTTACGAGGACGACGACGACGATGAAGACG
ATCTAGATCTCGATGATGAGGAAGACCTTGACGAAGGCGACGACTACGAC
GAGGATGACATGGATGGTATTCAGTCAAAATCCAAGTCGAAGCGCGGCGG
CAGTCCGGGATCTGAAGACGACGAGGAAGGTATCGCCGCTTGGGGTTCGT
CCAAGAAGGACCTTTACAGTGCGGATCAGATCGAAACGGAAGCAGACGCT
CTTGAGGAGGAGGAAGAAGCCAAGCGACTTCAGCAGAAGCATCTGCAGGC
CATCAACGAGGAAGACTTTGGCTTTGACGAATCTGAATGGGTTGAATCCG
GCAAGGACCAGAAGGATGCGGGGGATGGCGGTGAGGTGACAGAGGTTCTA
CCACAACTGGAGATTACGGAGGATATGAGCGAAGAGGAGAAGTTGAAGAT
ACTCAAGTCCAGATATCCCGAGTTCGAACCCCTAGCGAAAGACTTTGCCG
ACCTTCAGTCCACGCATCAGGCTCTCGCCAAGGCCGCTCGGAGCTTCAAT
GCCAACGATGACTCCGAAGATGCCCCGGATTCCGCACCTGTTGCAGTTGT
CAAGTTCCGCGCTCTGTCTGCTTACCTTGGTACGATCGGCATGTACTTTA
TGCTCCTGACCTCTTCCACCGACGACTCCGGCAAGCCTGCTCCGCTATCG
CCTGCTCAGCTACGAGCCCACCCAATAATGGGATCCCTAGTCAAGTTCAG
GAAACTCTGGGAGACCGTCAAGAACCTTAGTGAACCCGAGCCGGAGGCAT
CAGAAGCCGAGGATGACTCCGAAGTTGATGAAATCATGTCCGACGCACCT
ACGGCCAAGCAAAAGAGCAAGGGCAAGGAGGAGCAAACTTCCAAGAAGAA
CAAGAAGAAGACAGAGAAGGTATCCAAGGCACAACGCGCAGCCGAGGCAG
CACAAGCCGAGGCAGAGGCTCGGCGAGCAGAGCGACTCCGACAGACCGAA
GCCAACCTGGCCGATCTATCGAAGCTCGTTTCCGGATCGAGCAAGAAACG
AGCCGCCCAGAAGACCAAATCGAGCAAGGAAGCCGACGACTCCGACTTCG
GTGACGAAGACGCCCTCACAGCCAAGGAAGCCGAAGAGAAGGCCAAGCAG
AAGCGTTCTCTCCGCTTCTACACATCTCAACTCGCACAGAAAGCCAACAA
GCGTAACGCAGCCGGTCGTGACGCAGGTGGTGATGCAGATCTTCCTTACC
GTGAGCGTCTAAGGGACCGCCAAGCCCGCCTGAATGCCGAAGCCGAGAGA
CGTGGTAAACAGAAACTGAAGGACTCCGAGCAGCTGGGCGGCGACAGTGA
CGAGGAAGACCACCGGGTCGCCAAGCAGCTCCGCGGCGACGAAGGATCTG
ACGATGACGACTACTACGACATGGTCGCGGCTCGCGGCAAGCAGCGCAAG
GACGACAAGAAGGCGCGCGCTGACGCCTACGCTGCTGCGGCCCGTGAAGG
CGGCCACGTTGAGATCCAGGAGGAAGTCGGCCCCGATGGCAAGCGTGCTA
TCACCTACCAGATCGAGAAGAACAAGGGTCTTGCGCCTAAGCGTAGCAAG
GACTCTCGCAACCCTCGTGTCAAGAAGAGAAAGAGATACGAGGAGAAGAA
GAAGAAGCTCGGCAGTATTCGCCAGGTGTACAAGGGTGGTGAAGGTCGTG
GTGGATATGGTGGTGAACTTACGGGTATCAAGAAGAACGTGGTCAAGAGT
GTTAAGCTCTGAATGGGTAAAAAAAGAAAGGCCGGCGGTCGCCCTGCGGC
CCCCAAGGCGGACAAGCATGGTCCGTCCAAATTCCACATCGAGGAGCGAT
TCGATGATTCGGAGGATGAGTTCCAGACTGGTCGCGACCAAATCCTACTA
GAAGAGGCGCCGGAAGCAAAGAGACGTCGGAGAGTGGCTGAGGAAGAGGA
ACTTCTCCAGGCATCGGACGAAGAGATCATGGGTTACGAGGACGACGACG
ACGATGAAGACGATCTAGATCTCGATGATGAGGAAGACCTTGACGAAGGC
GACGACTACGACGAGGATGACATGGATGGTATTCAGTCAAAATCCAAGTC
GAAGCGCGGCGGCAGTCCGGGATCTGAAGACGACGAGGAAGGTATCGCCG
CTTGGGGTTCGTCCAAGAAGGACCTTTACAGTGCGGATCAGATCGAAACG
GAAGCAGACGCTCTTGAGGAGGAGGAAGAAGCCAAGCGACTTCAGCAGAA
GCATCTGCAGGCCATCAACGAGGAAGACTTTGGCTTTGACGAATCTGAAT
GGGTTGAATCCGGCAAGGACCAGAAGGATGCGGGGGATGGCGGTGAGGTG
ACAGAGGTTCTACCACAACTGGAGATTACGGAGGATATGAGCGAAGAGGA
GAAGTTGAAGATACTCAAGTCCAGATATCCCGAGTTCGAACCCCTAGCGA
AAGACTTTGCCGACCTTCAGTCCACGCATCAGGCTCTCGCCAAGGCCGCT
CGGAGCTTCAATGCCAACGATGACTCCGAAGATGCCCCGGATTCCGCACC
TGTTGCAGTTGTCAAGTTCCGCGCTCTGTCTGCTTACCTTGGTACGATCG
GCATGTACTTTATGCTCCTGACCTCTTCCACCGACGACTCCGGCAAGCCT
GCTCCGCTATCGCCTGCTCAGCTACGAGCCCACCCAATAATGGGATCCCT
AGTCAAGTTCAGGAAACTCTGGGAGACCGTCAAGAACCTTAGTGAACCCG
AGCCGGAGGCATCAGAAGCCGAGGATGACTCCGAAGTTGATGAAATCATG
TCCGACGCACCTACGGCCAAGCAAAAGAGCAAGGGCAAGGAGGAGCAAAC
TTCCAAGAAGAACAAGAAGAAGACAGAGAAGGTATCCAAGGCACAACGCG
CAGCCGAGGCAGCACAAGCCGAGGCAGAGGCTCGGCGAGCAGAGCGACTC
CGACAGACCGAAGCCAACCTGGCCGATCTATCGAAGCTCGTTTCCGGATC
GAGCAAGAAACGAGCCGCCCAGAAGACCAAATCGAGCAAGGAAGCCGACG
ACTCCGACTTCGGTGACGAAGACGCCCTCACAGCCAAGGAAGCCGAAGAG
AAGGCCAAGCAGAAGCGTTCTCTCCGCTTCTACACATCTCAACTCGCACA
GAAAGCCAACAAGCGTAACGCAGCCGGTCGTGACGCAGGTGGTGATGCAG
ATCTTCCTTACCGTGAGCGTCTAAGGGACCGCCAAGCCCGCCTGAATGCC
GAAGCCGAGAGACGTGGTAAACAGAAACTGAAGGACTCCGAGCAGCTGGG
CGGCGACAGTGACGAGGAAGACCACCGGGTCGCCAAGCAGCTCCGCGGCG
ACGAAGGATCTGACGATGACGACTACTACGACATGGTCGCGGCTCGCGGC
AAGCAGCGCAAGGACGACAAGAAGGCGCGCGCTGACGCCTACGCTGCTGC
GGCCCGTGAAGGCGGCCACGTTGAGATCCAGGAGGAAGTCGGCCCCGATG
GCAAGCGTGCTATCACCTACCAGATCGAGAAGAACAAGGGTCTTGCGCCT
AAGCGTAGCAAGGACTCTCGCAACCCTCGTGTCAAGAAGAGAAAGAGATA
CGAGGAGAAGAAGAAGAAGCTCGGCAGTATTCGCCAGGTGTACAAGGGTG
GTGAAGGTCGTGGTGGATATGGTGGTGAACTTACGGGTATCAAGAAGAAC
GTGGTCAAGAGTGTTAAGCTCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012074-T1.utr5p1 | KJC3_012074-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012074-T1.utr3p1 | KJC3_012074-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264BOA |
| DBxref | InterPro:IPR007146 |
| DBxref | InterPro:IPR018972 |
| DBxref | PFAM:PF04000 |
| DBxref | PFAM:PF09368 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2490205..2492399 + |
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