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KJC3_012075-T1, KJC3_012075-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012075-T1
Unique NameKJC3_012075-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2492428..2493713-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012075-T1 ID=KJC3_012075-T1|Name=KJC3_012075-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1286bp|location=Sequence derived from alignment at ch8:2492428..2493713- (Aspergillus niger KJC3)
CACCAATGAAAGCTAGCTGATGAGGTGCTATGCAGGTAGCTCTCATCATC
TATCTAGCGCAGGTGGGAAGGTATGCAACACCTGGTCCAAGAAAATCAAA
GCCATAATACTCAGCATAATAGCTTTGTCCCAGCTGAAAGCGCAGAACTT
GGGATCATCGACAAAATCTTGGTCAAGTCAAACACTCAAGATAGCGTCTC
CCAAGTAAGTTGGTGAGCCGTCTATCATACTAAAAATCTAACTTTTTGCA
CGCAACACAGATACAAAGTACCTTCATGAACGATCTGCAGCAGCTATCAT
TTGACCTGAAGCAGGTAACCGGCCATAGTCTGCTGTTGATAGATGAGTTC
GGTAAAGGCACCAATGAGTATGGTTCGTATACCCACAACCTCGAATGTCT
AGCCAGAAGCTGAAACTCTCAGATGGAATCGGACTGGCATGCGGAGTCCT
CGAGAACCTACTAAACCGTGAAGATGCTCCCAAAGTCATAGCGGCAACGC
ATTTTCATGAGATTCTCGCAAACGGATACCTCAAACCCAGACCGCAGTTA
CAGCTCGGCCACATGGAAGTCCGAGTGCATGAAGAACCCGGTGAAGCTGA
AGATCAAATTACTTATCTTTATAAGTATAGCGCCATTCTCTCACTGCACT
TATAAGCAGGAAGTACTAAGAGACATGGCATAGTTTTCGCCTAGGACGAA
GCGATCAAAGCTTTGGAACAATGTGCGTTCCTTTCCTCTACGGGAGAATC
AAGAATCTAAGGACAATTTCTGACTGAACACGACGATACAGATGCGCTGC
AATGAACGGAATCAGCCAGACTATCGTCGATCGAGCAAACGAAATTGCCG
CACTATCTGCCCGTGGTGAAAATCTGATTGCCGCTTGCGCTGTGCTTTCG
GCTCAAGAGACGCAGGCTCTGGAAGATGCAGTAGGATATATGCTATCTGT
TTGCTTCTGGTCCTCTGTTGAGATTGCTAACGGGGTCTTGCTTGAAGGAC
AGATTAGCAAGAGAGTTCCTGTCGTTGGATCTGTCAGAGGCTTGTGATGT
TACTAAGTTGGTGAGGGATAGGCTGGAGAAAATGTTCGATGGATCTGGTG
CGGGTCCTTAACTGCCACGTTATATATTTTCACCCGTACAGATCATGATG
CCGTGAAAGGTCGGAACCTCATGAGAGTCTGCCACACTGGCAACTACTAC
CACTACCACTAGCACCTGGACGGACTATCCGTCGCTTTCATGGTCTTTAT
AAGATTGTTCTATACTACTCGGTTACAATTACTGAT
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Coding sequence (CDS) from alignment at ch8:2492428..2493713-

>KJC3_012075-T1 ID=KJC3_012075-T1|Name=KJC3_012075-T1|organism=Aspergillus niger KJC3|type=CDS|length=5103bp|location=Sequence derived from alignment at ch8:2492428..2493713- (Aspergillus niger KJC3)
GACAGATTAGCAAGAGAGTTCCTGTCGTTGGATCTGTCAGAGGCTTGTGA
TGTTACTAAGTTGGTGAGGGATAGGCTGGAGAAAATGTTCGATGGATCTG
GTGCGGGTCCTTAAATGCGCTGCAATGAACGGAATCAGCCAGACTATCGT
CGATCGAGCAAACGAAATTGCCGCACTATCTGCCCGTGGTGAAAATCTGA
TTGCCGCTTGCGCTGTGCTTTCGGCTCAAGAGACGCAGGCTCTGGAAGAT
GCATTTTCGCCTAGGACGAAGCGATCAAAGCTTTGGAACAATATGGAATC
GGACTGGCATGCGGAGTCCTCGAGAACCTACTAAACCGTGAAGATGCTCC
CAAAGTCATAGCGGCAACGCATTTTCATGAGATTCTCGCAAACGGATACC
TCAAACCCAGACCGCAGTTACAGCTCGGCCACATGGAAGTCCGAGTGCAT
GAAGAACCCGGTGAAGCTGAAGATCAAATTACTTATCTTTATAAATACAA
AGTACCTTCATGAACGATCTGCAGCAGCTATCATTTGACCTGAAGCAGGT
AACCGGCCATAGTCTGCTGTTGATAGATGAGTTCGGTAAAGGCACCAATG
AGTATGCTTTGTCCCAGCTGAAAGCGCAGAACTTGGGATCATCGACAAAA
TCTTGGTCAAGTCAAACACTCAAGATAGCGTCTCCCAAATGCAGGTAGCT
CTCATCATCTATCTAGCGCAGGTGGGAAGGACAGATTAGCAAGAGAGTTC
CTGTCGTTGGATCTGTCAGAGGCTTGTGATGTTACTAAGTTGGTGAGGGA
TAGGCTGGAGAAAATGTTCGATGGATCTGGTGCGGGTCCTTAAATGCGCT
GCAATGAACGGAATCAGCCAGACTATCGTCGATCGAGCAAACGAAATTGC
CGCACTATCTGCCCGTGGTGAAAATCTGATTGCCGCTTGCGCTGTGCTTT
CGGCTCAAGAGACGCAGGCTCTGGAAGATGCATTTTCGCCTAGGACGAAG
CGATCAAAGCTTTGGAACAATATGGAATCGGACTGGCATGCGGAGTCCTC
GAGAACCTACTAAACCGTGAAGATGCTCCCAAAGTCATAGCGGCAACGCA
TTTTCATGAGATTCTCGCAAACGGATACCTCAAACCCAGACCGCAGTTAC
AGCTCGGCCACATGGAAGTCCGAGTGCATGAAGAACCCGGTGAAGCTGAA
GATCAAATTACTTATCTTTATAAATACAAAGTACCTTCATGAACGATCTG
CAGCAGCTATCATTTGACCTGAAGCAGGTAACCGGCCATAGTCTGCTGTT
GATAGATGAGTTCGGTAAAGGCACCAATGAGTATGCTTTGTCCCAGCTGA
AAGCGCAGAACTTGGGATCATCGACAAAATCTTGGTCAAGTCAAACACTC
AAGATAGCGTCTCCCAAATGCAGGTAGCTCTCATCATCTATCTAGCGCAG
GTGGGAAGGACAGATTAGCAAGAGAGTTCCTGTCGTTGGATCTGTCAGAG
GCTTGTGATGTTACTAAGTTGGTGAGGGATAGGCTGGAGAAAATGTTCGA
TGGATCTGGTGCGGGTCCTTAAATGCGCTGCAATGAACGGAATCAGCCAG
ACTATCGTCGATCGAGCAAACGAAATTGCCGCACTATCTGCCCGTGGTGA
AAATCTGATTGCCGCTTGCGCTGTGCTTTCGGCTCAAGAGACGCAGGCTC
TGGAAGATGCATTTTCGCCTAGGACGAAGCGATCAAAGCTTTGGAACAAT
ATGGAATCGGACTGGCATGCGGAGTCCTCGAGAACCTACTAAACCGTGAA
GATGCTCCCAAAGTCATAGCGGCAACGCATTTTCATGAGATTCTCGCAAA
CGGATACCTCAAACCCAGACCGCAGTTACAGCTCGGCCACATGGAAGTCC
GAGTGCATGAAGAACCCGGTGAAGCTGAAGATCAAATTACTTATCTTTAT
AAATACAAAGTACCTTCATGAACGATCTGCAGCAGCTATCATTTGACCTG
AAGCAGGTAACCGGCCATAGTCTGCTGTTGATAGATGAGTTCGGTAAAGG
CACCAATGAGTATGCTTTGTCCCAGCTGAAAGCGCAGAACTTGGGATCAT
CGACAAAATCTTGGTCAAGTCAAACACTCAAGATAGCGTCTCCCAAATGC
AGGTAGCTCTCATCATCTATCTAGCGCAGGTGGGAAGGACAGATTAGCAA
GAGAGTTCCTGTCGTTGGATCTGTCAGAGGCTTGTGATGTTACTAAGTTG
GTGAGGGATAGGCTGGAGAAAATGTTCGATGGATCTGGTGCGGGTCCTTA
AATGCGCTGCAATGAACGGAATCAGCCAGACTATCGTCGATCGAGCAAAC
GAAATTGCCGCACTATCTGCCCGTGGTGAAAATCTGATTGCCGCTTGCGC
TGTGCTTTCGGCTCAAGAGACGCAGGCTCTGGAAGATGCATTTTCGCCTA
GGACGAAGCGATCAAAGCTTTGGAACAATATGGAATCGGACTGGCATGCG
GAGTCCTCGAGAACCTACTAAACCGTGAAGATGCTCCCAAAGTCATAGCG
GCAACGCATTTTCATGAGATTCTCGCAAACGGATACCTCAAACCCAGACC
GCAGTTACAGCTCGGCCACATGGAAGTCCGAGTGCATGAAGAACCCGGTG
AAGCTGAAGATCAAATTACTTATCTTTATAAATACAAAGTACCTTCATGA
ACGATCTGCAGCAGCTATCATTTGACCTGAAGCAGGTAACCGGCCATAGT
CTGCTGTTGATAGATGAGTTCGGTAAAGGCACCAATGAGTATGCTTTGTC
CCAGCTGAAAGCGCAGAACTTGGGATCATCGACAAAATCTTGGTCAAGTC
AAACACTCAAGATAGCGTCTCCCAAATGCAGGTAGCTCTCATCATCTATC
TAGCGCAGGTGGGAAGGACAGATTAGCAAGAGAGTTCCTGTCGTTGGATC
TGTCAGAGGCTTGTGATGTTACTAAGTTGGTGAGGGATAGGCTGGAGAAA
ATGTTCGATGGATCTGGTGCGGGTCCTTAAATGCGCTGCAATGAACGGAA
TCAGCCAGACTATCGTCGATCGAGCAAACGAAATTGCCGCACTATCTGCC
CGTGGTGAAAATCTGATTGCCGCTTGCGCTGTGCTTTCGGCTCAAGAGAC
GCAGGCTCTGGAAGATGCATTTTCGCCTAGGACGAAGCGATCAAAGCTTT
GGAACAATATGGAATCGGACTGGCATGCGGAGTCCTCGAGAACCTACTAA
ACCGTGAAGATGCTCCCAAAGTCATAGCGGCAACGCATTTTCATGAGATT
CTCGCAAACGGATACCTCAAACCCAGACCGCAGTTACAGCTCGGCCACAT
GGAAGTCCGAGTGCATGAAGAACCCGGTGAAGCTGAAGATCAAATTACTT
ATCTTTATAAATACAAAGTACCTTCATGAACGATCTGCAGCAGCTATCAT
TTGACCTGAAGCAGGTAACCGGCCATAGTCTGCTGTTGATAGATGAGTTC
GGTAAAGGCACCAATGAGTATGCTTTGTCCCAGCTGAAAGCGCAGAACTT
GGGATCATCGACAAAATCTTGGTCAAGTCAAACACTCAAGATAGCGTCTC
CCAAATGCAGGTAGCTCTCATCATCTATCTAGCGCAGGTGGGAAGGACAG
ATTAGCAAGAGAGTTCCTGTCGTTGGATCTGTCAGAGGCTTGTGATGTTA
CTAAGTTGGTGAGGGATAGGCTGGAGAAAATGTTCGATGGATCTGGTGCG
GGTCCTTAAATGCGCTGCAATGAACGGAATCAGCCAGACTATCGTCGATC
GAGCAAACGAAATTGCCGCACTATCTGCCCGTGGTGAAAATCTGATTGCC
GCTTGCGCTGTGCTTTCGGCTCAAGAGACGCAGGCTCTGGAAGATGCATT
TTCGCCTAGGACGAAGCGATCAAAGCTTTGGAACAATATGGAATCGGACT
GGCATGCGGAGTCCTCGAGAACCTACTAAACCGTGAAGATGCTCCCAAAG
TCATAGCGGCAACGCATTTTCATGAGATTCTCGCAAACGGATACCTCAAA
CCCAGACCGCAGTTACAGCTCGGCCACATGGAAGTCCGAGTGCATGAAGA
ACCCGGTGAAGCTGAAGATCAAATTACTTATCTTTATAAATACAAAGTAC
CTTCATGAACGATCTGCAGCAGCTATCATTTGACCTGAAGCAGGTAACCG
GCCATAGTCTGCTGTTGATAGATGAGTTCGGTAAAGGCACCAATGAGTAT
GCTTTGTCCCAGCTGAAAGCGCAGAACTTGGGATCATCGACAAAATCTTG
GTCAAGTCAAACACTCAAGATAGCGTCTCCCAAATGCAGGTAGCTCTCAT
CATCTATCTAGCGCAGGTGGGAAGGACAGATTAGCAAGAGAGTTCCTGTC
GTTGGATCTGTCAGAGGCTTGTGATGTTACTAAGTTGGTGAGGGATAGGC
TGGAGAAAATGTTCGATGGATCTGGTGCGGGTCCTTAAATGCGCTGCAAT
GAACGGAATCAGCCAGACTATCGTCGATCGAGCAAACGAAATTGCCGCAC
TATCTGCCCGTGGTGAAAATCTGATTGCCGCTTGCGCTGTGCTTTCGGCT
CAAGAGACGCAGGCTCTGGAAGATGCATTTTCGCCTAGGACGAAGCGATC
AAAGCTTTGGAACAATATGGAATCGGACTGGCATGCGGAGTCCTCGAGAA
CCTACTAAACCGTGAAGATGCTCCCAAAGTCATAGCGGCAACGCATTTTC
ATGAGATTCTCGCAAACGGATACCTCAAACCCAGACCGCAGTTACAGCTC
GGCCACATGGAAGTCCGAGTGCATGAAGAACCCGGTGAAGCTGAAGATCA
AATTACTTATCTTTATAAATACAAAGTACCTTCATGAACGATCTGCAGCA
GCTATCATTTGACCTGAAGCAGGTAACCGGCCATAGTCTGCTGTTGATAG
ATGAGTTCGGTAAAGGCACCAATGAGTATGCTTTGTCCCAGCTGAAAGCG
CAGAACTTGGGATCATCGACAAAATCTTGGTCAAGTCAAACACTCAAGAT
AGCGTCTCCCAAATGCAGGTAGCTCTCATCATCTATCTAGCGCAGGTGGG
AAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006298mismatch repair
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0030983mismatched DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012075KJC3_012075Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012075-T1KJC3_012075-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012075-T1.cdsKJC3_012075-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012075-T1.utr3p1KJC3_012075-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012075-T1.exon7KJC3_012075-T1.exon7Aspergillus niger KJC3exon
KJC3_012075-T1.exon6KJC3_012075-T1.exon6Aspergillus niger KJC3exon
KJC3_012075-T1.exon5KJC3_012075-T1.exon5Aspergillus niger KJC3exon
KJC3_012075-T1.exon4KJC3_012075-T1.exon4Aspergillus niger KJC3exon
KJC3_012075-T1.exon3KJC3_012075-T1.exon3Aspergillus niger KJC3exon
KJC3_012075-T1.exon2KJC3_012075-T1.exon2Aspergillus niger KJC3exon
KJC3_012075-T1.exon1KJC3_012075-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012075-T1.utr5p1KJC3_012075-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR000432
DBxrefPFAM:PF00488
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2492428..2493713 -
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