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KJC3_012083-T1, KJC3_012083-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012083-T1
Unique NameKJC3_012083-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2519978..2521622+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012083-T1 ID=KJC3_012083-T1|Name=KJC3_012083-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1645bp|location=Sequence derived from alignment at ch8:2519978..2521622+ (Aspergillus niger KJC3)
ATGGGACACATGAGCTACCCCTCCCAAATGGATAGCCCCTCCAGGCAACT
TGTCCTGGATTTAGCGCGGGACCTTGAACAGTTACGCATGCACAACACCG
AGTTGAAGAAGGTCAAAGCCTACGAACGCCGATCCTTCTATGAGAACCTT
GACCGAATTGATAGCGAACTTGAGGCCCAGCACAATGCGGCCCTTGACAA
GGCTGCCGCTCTGCATGATCGGGTACTCGTGGAGGCCGAAGAGACGTTGC
GCGCACACCAACGAGCGGTAGAGGAGGAGCTCCGTCGGAGAGAGGAAGAA
GCACGGAAAGAGGCGGAGCGCATAGAACGAGAGAAGGCAGAGAAGCTACG
CCGAGAGCAGGAGGAGGCTGCACGGCGTGAGGCTGAGCGCAGAGCAGCCG
AGGAGGCGAAGAAGAAGGCAGAGGAAGAGGCGGAGAGGAAAAAGAAGGCG
GCGCAAGAAGAACAGGAGCGGAAAGAACGAGAGCGACTAGAGGAAGAGAA
TCGCAAGCGCCAGGAAGAGACACAAAAGGCAGAGCAGGAGGCGTCCCAAC
GCCAAGCGGAAGCCGCGCAAAAGGCACAGGCGGAGCGACAGCGACAGGTC
GGAGGCGCTCGTCTTACGGAGGAAGAAATCAAGGTCCAGGCCCGCTACGT
GGAACTGCACCAACATCTCAAGAAGTTCCGGCAGTACTTGAAAAATGAAG
GGAAAACAAACGCCATTGTCAAGCAAAACATGGGCGATATGCGGCGAACG
ATTAAGAAATGCGTTGGACAACTACGTGAAGGCAAGGGAGCCAACAAAGC
CCAGGTAAGTGTCTTGCTGTGCTTCCCAAGTAATAGAAGAAGGCAGCGAG
CTAACCTCGTCAACTGCCAAACAGCTTCAAGAGATTCGCGCGACGCTTGA
GAAAGCCGCCTCGATTGCTGAACCGTCGGTGGATGTTCGCCAATTCATCG
CTTTCCCGCCCGAGAATATTGCCAATTCCGATGACAACAAGGTGCCTGCC
CTTTTGATCTACGCCCTGAACATCTTCTCCAAGTGTATGATCTCTTCCCT
CATTACGGAGGCGTCCATCAACCTGGGCCATGCGGAGCCGGTCGGGATCG
TCGCGGCCCAGATATTCTCCGCCGATGCCTTCATCTACAAGGGCTGCCAC
ATGGTGGACATTCTATTGGCCAAGTACCGTGTTGTTTGCCCAGCGCTGTG
GGGATTCCATGGCAATGAGAAGACCGAGGGTGGCCGACGTGCCCTGGGTT
GGTGGCGCGAAGGACCGGACGGGCCGTACATCAGCGAACAGGCCCACGCC
GACCGAATGACAGCTCTGGGTGCGGGTTATGCGGCCTTGACCCTGCGCAA
TTTTGGCAAAACCGCGCGCAAGAACCCTTTCCCCAACACCATGTTTTGGT
ATACCATGCATAAAATCCTGAATATCCCGCCGGCAGAGATCCAGGATACT
CATGTCACCCTGCTTTCGGCAATGCTGAAATCGTCAGCCGAAAGAATTGT
TGGTTTCTTCGGGCATATCGGACTGGCGCTGATGAGGAAGGCTATAGTCG
AATTACCCGACAGCCTGCCCCGGCAGAGTATGAGCGTTAACCAACTCAAG
CTCCTCAAGGATCTGTATAAACGGGAGAAGAACATTTTGCTCTGA
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Coding sequence (CDS) from alignment at ch8:2519978..2521622+

>KJC3_012083-T1 ID=KJC3_012083-T1|Name=KJC3_012083-T1|organism=Aspergillus niger KJC3|type=CDS|length=3150bp|location=Sequence derived from alignment at ch8:2519978..2521622+ (Aspergillus niger KJC3)
ATGGGACACATGAGCTACCCCTCCCAAATGGATAGCCCCTCCAGGCAACT
TGTCCTGGATTTAGCGCGGGACCTTGAACAGTTACGCATGCACAACACCG
AGTTGAAGAAGGTCAAAGCCTACGAACGCCGATCCTTCTATGAGAACCTT
GACCGAATTGATAGCGAACTTGAGGCCCAGCACAATGCGGCCCTTGACAA
GGCTGCCGCTCTGCATGATCGGGTACTCGTGGAGGCCGAAGAGACGTTGC
GCGCACACCAACGAGCGGTAGAGGAGGAGCTCCGTCGGAGAGAGGAAGAA
GCACGGAAAGAGGCGGAGCGCATAGAACGAGAGAAGGCAGAGAAGCTACG
CCGAGAGCAGGAGGAGGCTGCACGGCGTGAGGCTGAGCGCAGAGCAGCCG
AGGAGGCGAAGAAGAAGGCAGAGGAAGAGGCGGAGAGGAAAAAGAAGGCG
GCGCAAGAAGAACAGGAGCGGAAAGAACGAGAGCGACTAGAGGAAGAGAA
TCGCAAGCGCCAGGAAGAGACACAAAAGGCAGAGCAGGAGGCGTCCCAAC
GCCAAGCGGAAGCCGCGCAAAAGGCACAGGCGGAGCGACAGCGACAGGTC
GGAGGCGCTCGTCTTACGGAGGAAGAAATCAAGGTCCAGGCCCGCTACGT
GGAACTGCACCAACATCTCAAGAAGTTCCGGCAGTACTTGAAAAATGAAG
GGAAAACAAACGCCATTGTCAAGCAAAACATGGGCGATATGCGGCGAACG
ATTAAGAAATGCGTTGGACAACTACGTGAAGGCAAGGGAGCCAACAAAGC
CCAGCTTCAAGAGATTCGCGCGACGCTTGAGAAAGCCGCCTCGATTGCTG
AACCGTCGGTGGATGTTCGCCAATTCATCGCTTTCCCGCCCGAGAATATT
GCCAATTCCGATGACAACAAGGTGCCTGCCCTTTTGATCTACGCCCTGAA
CATCTTCTCCAAGTGTATGATCTCTTCCCTCATTACGGAGGCGTCCATCA
ACCTGGGCCATGCGGAGCCGGTCGGGATCGTCGCGGCCCAGATATTCTCC
GCCGATGCCTTCATCTACAAGGGCTGCCACATGGTGGACATTCTATTGGC
CAAGTACCGTGTTGTTTGCCCAGCGCTGTGGGGATTCCATGGCAATGAGA
AGACCGAGGGTGGCCGACGTGCCCTGGGTTGGTGGCGCGAAGGACCGGAC
GGGCCGTACATCAGCGAACAGGCCCACGCCGACCGAATGACAGCTCTGGG
TGCGGGTTATGCGGCCTTGACCCTGCGCAATTTTGGCAAAACCGCGCGCA
AGAACCCTTTCCCCAACACCATGTTTTGGTATACCATGCATAAAATCCTG
AATATCCCGCCGGCAGAGATCCAGGATACTCATGTCACCCTGCTTTCGGC
AATGCTGAAATCGTCAGCCGAAAGAATTGTTGGTTTCTTCGGGCATATCG
GACTGGCGCTGATGAGGAAGGCTATAGTCGAATTACCCGACAGCCTGCCC
CGGCAGAGTATGAGCGTTAACCAACTCAAGCTCCTCAAGGATCTGTATAA
ACGGGAGAAGAACATTTTGCTCTGAATGGGACACATGAGCTACCCCTCCC
AAATGGATAGCCCCTCCAGGCAACTTGTCCTGGATTTAGCGCGGGACCTT
GAACAGTTACGCATGCACAACACCGAGTTGAAGAAGGTCAAAGCCTACGA
ACGCCGATCCTTCTATGAGAACCTTGACCGAATTGATAGCGAACTTGAGG
CCCAGCACAATGCGGCCCTTGACAAGGCTGCCGCTCTGCATGATCGGGTA
CTCGTGGAGGCCGAAGAGACGTTGCGCGCACACCAACGAGCGGTAGAGGA
GGAGCTCCGTCGGAGAGAGGAAGAAGCACGGAAAGAGGCGGAGCGCATAG
AACGAGAGAAGGCAGAGAAGCTACGCCGAGAGCAGGAGGAGGCTGCACGG
CGTGAGGCTGAGCGCAGAGCAGCCGAGGAGGCGAAGAAGAAGGCAGAGGA
AGAGGCGGAGAGGAAAAAGAAGGCGGCGCAAGAAGAACAGGAGCGGAAAG
AACGAGAGCGACTAGAGGAAGAGAATCGCAAGCGCCAGGAAGAGACACAA
AAGGCAGAGCAGGAGGCGTCCCAACGCCAAGCGGAAGCCGCGCAAAAGGC
ACAGGCGGAGCGACAGCGACAGGTCGGAGGCGCTCGTCTTACGGAGGAAG
AAATCAAGGTCCAGGCCCGCTACGTGGAACTGCACCAACATCTCAAGAAG
TTCCGGCAGTACTTGAAAAATGAAGGGAAAACAAACGCCATTGTCAAGCA
AAACATGGGCGATATGCGGCGAACGATTAAGAAATGCGTTGGACAACTAC
GTGAAGGCAAGGGAGCCAACAAAGCCCAGCTTCAAGAGATTCGCGCGACG
CTTGAGAAAGCCGCCTCGATTGCTGAACCGTCGGTGGATGTTCGCCAATT
CATCGCTTTCCCGCCCGAGAATATTGCCAATTCCGATGACAACAAGGTGC
CTGCCCTTTTGATCTACGCCCTGAACATCTTCTCCAAGTGTATGATCTCT
TCCCTCATTACGGAGGCGTCCATCAACCTGGGCCATGCGGAGCCGGTCGG
GATCGTCGCGGCCCAGATATTCTCCGCCGATGCCTTCATCTACAAGGGCT
GCCACATGGTGGACATTCTATTGGCCAAGTACCGTGTTGTTTGCCCAGCG
CTGTGGGGATTCCATGGCAATGAGAAGACCGAGGGTGGCCGACGTGCCCT
GGGTTGGTGGCGCGAAGGACCGGACGGGCCGTACATCAGCGAACAGGCCC
ACGCCGACCGAATGACAGCTCTGGGTGCGGGTTATGCGGCCTTGACCCTG
CGCAATTTTGGCAAAACCGCGCGCAAGAACCCTTTCCCCAACACCATGTT
TTGGTATACCATGCATAAAATCCTGAATATCCCGCCGGCAGAGATCCAGG
ATACTCATGTCACCCTGCTTTCGGCAATGCTGAAATCGTCAGCCGAAAGA
ATTGTTGGTTTCTTCGGGCATATCGGACTGGCGCTGATGAGGAAGGCTAT
AGTCGAATTACCCGACAGCCTGCCCCGGCAGAGTATGAGCGTTAACCAAC
TCAAGCTCCTCAAGGATCTGTATAAACGGGAGAAGAACATTTTGCTCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005643nuclear pore
Vocabulary: Biological Process
TermDefinition
GO:0016973poly(A)+ mRNA export from nucleus
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012083KJC3_012083Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012083-T1.exon1KJC3_012083-T1.exon1Aspergillus niger KJC3exon
KJC3_012083-T1.exon2KJC3_012083-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012083-T1.cdsKJC3_012083-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012083-T1KJC3_012083-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR038506
DBxrefInterPro:IPR012476
DBxrefPFAM:PF07817
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2519978..2521622 +
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