|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2522729..2524375+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012084-T1 ID=KJC3_012084-T1|Name=KJC3_012084-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1647bp|location=Sequence derived from alignment at ch8:2522729..2524375+ (Aspergillus niger KJC3)
ATGCCTGCAATCAACTCATCCATGGCTGCGAACCTCCCAATCGAGCTCAT
CCTCTGTATCCTCGATCATGTCGATATCGAGACGTACGTCGCTGCCCGCT
CAGCATGTTGCTCATGGCGCAAAGCAGCGTCAATGTCGTCTACCATCCGG
AACGCTTTGACCGAACTCCCCGTGCCGATACCACCACGTGCCGATGCTCT
TACAACCGAAGAATGGAACGCATACTTCTGCCAAATCGCTTGCCTGAACC
TACTAGGCCACCGGACCCACATCGACAAAACAGCCTCCAGACGTGCCCTA
CCTGAAGACTGCACCCCTACCACAATTCTAGCGACATCTCAAGATGGTCT
AAAAATGGCAACCCTGAAAGGCGCACGCGCAACTATCTTCACCCGCTCAA
ACAAGCAGTCCTCCTGGGAATACACCCTAGCCTCAACACTCTACCCCCTC
TGGACCTCCGTATACCGTGCCCTAATGGACGGAGGCGGCACTGGCAGCGG
CATGGCGCTCAACCCGCGCTACGGCAAACGCTGCATTGCCATCTCCTCAC
AAGGCCACCTCATCGCCGTCGGCCTAGGCAAGACCCTCCAAATTTACAGC
CTCTCCGCGGACGAAGACAACGGCATTTCCTCCCCAGCAGAATACTCCCT
CGACCAGCACGACGTCATCCACGCAGCCTCCCCGAGCGCAGGCTACGAAG
AAACCGACGGAGTCATCGACTCCCTCGAATTCACCGACGACGACATTCTC
CTCCGTGTCGCAATCAACCAAGATACAACAGCCTTTCAACCGAATCGCGT
CCGCTATCTGGGTAATCCCTCCGCCCTAAAATATTCCCCCCATCACAATA
ACGCATCACACCTCCAATACTGGCGCGAAAACATCCACCACATCCACCTC
GACTCCGCCTCCATGGCCGTGACACTAGGCGCAGGCGAAGAGAAAGTCGT
ATTTCGAGGCCTGCGCCTTCTTCCTTCTTCTTACAAACCGACCACAACAA
CACCTCAGATCTCATCATCATCTTCATCATCATACTCATCATCGCACTAC
TTCACCGCATCCCTCCAATCAGGCCCCACAGCCGCTTACTGTATCGGCCA
CATCGCTATCTCCTCCTCCCCTCCCACATCTCAACAAGTGACTATCACCC
GCCTCCTACCTTCTCGCCAGCACCACACGCTTCCTTCCAGCACCGATCAC
AAAACAACACCTCCGTCCTCTCAAACCGCGACAACAATCCCCCGCTGGAA
CCCCCTCAACCTCCCCACCGCATCTTCCACAACCCCTATCCTCTCCATCT
CTCCGGACAACAAGCTCCTAGTCATTTACGAACCTGATTCTTCTTCCCAG
GGGGGAGGTGGAGGGGGGATATACGTGTACTGCATTGAGGAGTGCGAATC
CGTGTATACCAACCATACCAGCGATAAGAATATTGATTCTGCTATGAACA
CAGACCAGCAAGAGAAACATCATTCTTATCCTTGTCCTTCGTCGGAGGAG
AGGATCACGTCTTGGTCGTTCTTATTGGATAATGTATCTGTGGATGTGGA
TGAGCTGAGAGTTGATAAGGTCGTTAGGGATGGTAGCGGGTATTATGAGG
TGATGGCGTTAGCGGGGAAGGATGTTTTGGAGTGGAGGATTCATTAA back to topCoding sequence (CDS) from alignment at ch8:2522729..2524375+ >KJC3_012084-T1 ID=KJC3_012084-T1|Name=KJC3_012084-T1|organism=Aspergillus niger KJC3|type=CDS|length=1647bp|location=Sequence derived from alignment at ch8:2522729..2524375+ (Aspergillus niger KJC3)
ATGCCTGCAATCAACTCATCCATGGCTGCGAACCTCCCAATCGAGCTCAT
CCTCTGTATCCTCGATCATGTCGATATCGAGACGTACGTCGCTGCCCGCT
CAGCATGTTGCTCATGGCGCAAAGCAGCGTCAATGTCGTCTACCATCCGG
AACGCTTTGACCGAACTCCCCGTGCCGATACCACCACGTGCCGATGCTCT
TACAACCGAAGAATGGAACGCATACTTCTGCCAAATCGCTTGCCTGAACC
TACTAGGCCACCGGACCCACATCGACAAAACAGCCTCCAGACGTGCCCTA
CCTGAAGACTGCACCCCTACCACAATTCTAGCGACATCTCAAGATGGTCT
AAAAATGGCAACCCTGAAAGGCGCACGCGCAACTATCTTCACCCGCTCAA
ACAAGCAGTCCTCCTGGGAATACACCCTAGCCTCAACACTCTACCCCCTC
TGGACCTCCGTATACCGTGCCCTAATGGACGGAGGCGGCACTGGCAGCGG
CATGGCGCTCAACCCGCGCTACGGCAAACGCTGCATTGCCATCTCCTCAC
AAGGCCACCTCATCGCCGTCGGCCTAGGCAAGACCCTCCAAATTTACAGC
CTCTCCGCGGACGAAGACAACGGCATTTCCTCCCCAGCAGAATACTCCCT
CGACCAGCACGACGTCATCCACGCAGCCTCCCCGAGCGCAGGCTACGAAG
AAACCGACGGAGTCATCGACTCCCTCGAATTCACCGACGACGACATTCTC
CTCCGTGTCGCAATCAACCAAGATACAACAGCCTTTCAACCGAATCGCGT
CCGCTATCTGGGTAATCCCTCCGCCCTAAAATATTCCCCCCATCACAATA
ACGCATCACACCTCCAATACTGGCGCGAAAACATCCACCACATCCACCTC
GACTCCGCCTCCATGGCCGTGACACTAGGCGCAGGCGAAGAGAAAGTCGT
ATTTCGAGGCCTGCGCCTTCTTCCTTCTTCTTACAAACCGACCACAACAA
CACCTCAGATCTCATCATCATCTTCATCATCATACTCATCATCGCACTAC
TTCACCGCATCCCTCCAATCAGGCCCCACAGCCGCTTACTGTATCGGCCA
CATCGCTATCTCCTCCTCCCCTCCCACATCTCAACAAGTGACTATCACCC
GCCTCCTACCTTCTCGCCAGCACCACACGCTTCCTTCCAGCACCGATCAC
AAAACAACACCTCCGTCCTCTCAAACCGCGACAACAATCCCCCGCTGGAA
CCCCCTCAACCTCCCCACCGCATCTTCCACAACCCCTATCCTCTCCATCT
CTCCGGACAACAAGCTCCTAGTCATTTACGAACCTGATTCTTCTTCCCAG
GGGGGAGGTGGAGGGGGGATATACGTGTACTGCATTGAGGAGTGCGAATC
CGTGTATACCAACCATACCAGCGATAAGAATATTGATTCTGCTATGAACA
CAGACCAGCAAGAGAAACATCATTCTTATCCTTGTCCTTCGTCGGAGGAG
AGGATCACGTCTTGGTCGTTCTTATTGGATAATGTATCTGTGGATGTGGA
TGAGCTGAGAGTTGATAAGGTCGTTAGGGATGGTAGCGGGTATTATGAGG
TGATGGCGTTAGCGGGGAAGGATGTTTTGGAGTGGAGGATTCATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR001810 |
| DBxref | PFAM:PF00646 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2522729..2524375 + |
|
