You are here

Home

KJC3_012087-T1, KJC3_012087-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012087-T1
Unique NameKJC3_012087-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2536717..2538053+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012087-T1 ID=KJC3_012087-T1|Name=KJC3_012087-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1337bp|location=Sequence derived from alignment at ch8:2536717..2538053+ (Aspergillus niger KJC3)
TCCGAACCCTGCCAGGACTAGTCTAGTTAGTGCCGGGTGATCTGGTGGTG
GTCCGAGCGTCCAGAATTCCCAGCGCAGCACAGAGACCACCTTGCCCGTC
GGGAGTCGAAGCACACCTAGCAAGCCCGACCACCACCACCACTTTACCTT
GATCCTTCTCGAGGAAGAACTCCACCAACCTACTACCGGATTCGGAGTCG
TCAAAAGCAAATTTCCTACCCACCATGCGATTCTCCGCAACGACCCTCCT
GATCACGGCGCTGGCGTGGTTCAGCACCGTGACCGCACACAACATCCAGC
TCCGGGCTCACTCCCGCGAATGCTTCCACGAGTCATTGCACAAGGATGAC
AAGATGACTGTCTCCTTCCAGGTCGGTGACCGGGAATTTGGAGGCAGTGG
CAACCTGGAGATCGATTTCTGGGTAGGTTCCCTGAATAGCATACTAGCTG
TCAATCTCCGCGCGGACTTTGGGGTGGTTTGATATCCCATATCAAGCTTC
CAAACCTGCAAAACCAATCCGAAGAATATAGTCGCTCACGTGTGATTGGA
ACAAACAGGTCGAGGACCCCCTTGGTAACCGTCAATACTACAAGCACGCC
ATCTCGTCGGAGGATTACTCGTTCAACGCGCACGCGGACGGCAAATACGT
CTACTGCTTCAGCAACGAAGGATGGGCCTCGAACTCCAAGGAAGTCTCGT
TCAACGTTCACGGAATTGTCTACGTCCCCGAATCGGAATTGGCGCAGGAT
CCCTTGGAGGCGGAAGGTAGGATTGAATACCCAATCATCGTTTATACAAA
TCCTCGGCGACCGTATGAGCTAACCGCGGTTGTCTTCTACATCGCAGTCC
GCAAGCTCTCGGAGGCTCTCGCACAGGTTAAGGATGAGCAGTCGTACATT
GTTGTGAGAGAGCGGGTTCACCGGAACACGGCCGAGAGCACCAACGCCCG
GGTGAAGTGGTGGAGTATCTTCCAGCTGGCTGTGCTGATCGGCGAGGGTA
TTTTCCAGGTGTGGTGGCTCAAGAGATTCTTCGAGGTTAGTCAATCCTTT
CTTCGTCCGTCTAGGTGACTATGACTAACGATGGGAACGTGTATAGGTCA
AGCGTGTTGTCTAAAGTGATTATCTTACGAGCGTGATAATTGTAAAGGGC
ATTCTATTATACCCTTGGCATTCTTCTTATAACTGAAATTATGGAGCTTT
TTCTCTTTCTTTTCCAATGAATGAATAAGATCATCTGGATGATTCTTGTT
ATCATGGGATATACTATCTAAATGTACGAAGCATGTATACAGCCAAAAGT
GAACCAGCGCAGCATCAAAGCCCATTATCCCCTTCCC
back to top

Coding sequence (CDS) from alignment at ch8:2536717..2538053+

>KJC3_012087-T1 ID=KJC3_012087-T1|Name=KJC3_012087-T1|organism=Aspergillus niger KJC3|type=CDS|length=2079bp|location=Sequence derived from alignment at ch8:2536717..2538053+ (Aspergillus niger KJC3)
ATGCGATTCTCCGCAACGACCCTCCTGATCACGGCGCTGGCGTGGTTCAG
CACCGTGACCGCACACAACATCCAGCTCCGGGCTCACTCCCGCGAATGCT
TCCACGAGTCATTGCACAAGGATGACAAGATGACTGTCTCCTTCCAGGTC
GGTGACCGGGAATTTGGAGGCAGTGGCAACCTGGAGATCGATTTCTGGGT
CGAGGACCCCCTTGGTAACCGTCAATACTACAAGCACGCCATCTCGTCGG
AGGATTACTCGTTCAACGCGCACGCGGACGGCAAATACGTCTACTGCTTC
AGCAACGAAGGATGGGCCTCGAACTCCAAGGAAGTCTCGTTCAACGTTCA
CGGAATTGTCTACGTCCCCGAATCGGAATTGGCGCAGGATCCCTTGGAGG
CGGAAGGTAGGATTGAATACCCAATCATCGTTTATACAAATCCTCGGCGA
CCGTATGAGCTAACCGCGGTTGTCTTCTACATCGCAGTCCGCAAGCTCTC
GGAGGCTCTCGCACAGGTTAAGGATGAGCAGTCGTACATTGTTGTGAGAG
AGCGGGTTCACCGGAACACGGCCGAGAGCACCAACGCCCGGGTGAAGTGG
TGGAGTATCTTCCAGCTGGCTGTGCTGATCGGCGAGGGTATTTTCCAGGT
GTGGTGGCTCAAGAGATTCTTCGAGGTCAAGCGTGTTGTCTAAATGCGAT
TCTCCGCAACGACCCTCCTGATCACGGCGCTGGCGTGGTTCAGCACCGTG
ACCGCACACAACATCCAGCTCCGGGCTCACTCCCGCGAATGCTTCCACGA
GTCATTGCACAAGGATGACAAGATGACTGTCTCCTTCCAGGTCGGTGACC
GGGAATTTGGAGGCAGTGGCAACCTGGAGATCGATTTCTGGGTCGAGGAC
CCCCTTGGTAACCGTCAATACTACAAGCACGCCATCTCGTCGGAGGATTA
CTCGTTCAACGCGCACGCGGACGGCAAATACGTCTACTGCTTCAGCAACG
AAGGATGGGCCTCGAACTCCAAGGAAGTCTCGTTCAACGTTCACGGAATT
GTCTACGTCCCCGAATCGGAATTGGCGCAGGATCCCTTGGAGGCGGAAGG
TAGGATTGAATACCCAATCATCGTTTATACAAATCCTCGGCGACCGTATG
AGCTAACCGCGGTTGTCTTCTACATCGCAGTCCGCAAGCTCTCGGAGGCT
CTCGCACAGGTTAAGGATGAGCAGTCGTACATTGTTGTGAGAGAGCGGGT
TCACCGGAACACGGCCGAGAGCACCAACGCCCGGGTGAAGTGGTGGAGTA
TCTTCCAGCTGGCTGTGCTGATCGGCGAGGGTATTTTCCAGGTGTGGTGG
CTCAAGAGATTCTTCGAGGTCAAGCGTGTTGTCTAAATGCGATTCTCCGC
AACGACCCTCCTGATCACGGCGCTGGCGTGGTTCAGCACCGTGACCGCAC
ACAACATCCAGCTCCGGGCTCACTCCCGCGAATGCTTCCACGAGTCATTG
CACAAGGATGACAAGATGACTGTCTCCTTCCAGGTCGGTGACCGGGAATT
TGGAGGCAGTGGCAACCTGGAGATCGATTTCTGGGTCGAGGACCCCCTTG
GTAACCGTCAATACTACAAGCACGCCATCTCGTCGGAGGATTACTCGTTC
AACGCGCACGCGGACGGCAAATACGTCTACTGCTTCAGCAACGAAGGATG
GGCCTCGAACTCCAAGGAAGTCTCGTTCAACGTTCACGGAATTGTCTACG
TCCCCGAATCGGAATTGGCGCAGGATCCCTTGGAGGCGGAAGGTAGGATT
GAATACCCAATCATCGTTTATACAAATCCTCGGCGACCGTATGAGCTAAC
CGCGGTTGTCTTCTACATCGCAGTCCGCAAGCTCTCGGAGGCTCTCGCAC
AGGTTAAGGATGAGCAGTCGTACATTGTTGTGAGAGAGCGGGTTCACCGG
AACACGGCCGAGAGCACCAACGCCCGGGTGAAGTGGTGGAGTATCTTCCA
GCTGGCTGTGCTGATCGGCGAGGGTATTTTCCAGGTGTGGTGGCTCAAGA
GATTCTTCGAGGTCAAGCGTGTTGTCTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012087KJC3_012087Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012087-T1KJC3_012087-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012087-T1.utr5p1KJC3_012087-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012087-T1.exon1KJC3_012087-T1.exon1Aspergillus niger KJC3exon
KJC3_012087-T1.exon2KJC3_012087-T1.exon2Aspergillus niger KJC3exon
KJC3_012087-T1.exon3KJC3_012087-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012087-T1.cdsKJC3_012087-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012087-T1.utr3p1KJC3_012087-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
NoteBUSCO:EOG09264FOM
DBxrefInterPro:IPR036598
DBxrefInterPro:IPR009038
DBxrefPFAM:PF01105
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2536717..2538053 +
Powered by Drupal