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KJC3_012088-T1, KJC3_012088-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012088-T1
Unique NameKJC3_012088-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2539069..2540388-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012088-T1 ID=KJC3_012088-T1|Name=KJC3_012088-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1320bp|location=Sequence derived from alignment at ch8:2539069..2540388- (Aspergillus niger KJC3)
CTATAGTTCCATACAGTAAATAAACTGCCCGAAGTACCTTAACTCGCGGC
GATCAGGTTCACTCCGGGTATCACCACTCGGGGGATCGCCATAGGCTGAC
CGTTGCTTGTGGAACGTGCGTCCCTGACCCCTCACCGAGGAGCGGGGCTT
AACGTCCGGGATTTATCAGCTGCTCGACTTCTTTCAGCAAGCACCAGAAC
ATAATACAGATTGACATAGCTCTTGAGCATCATCATATCAATCTATTCCA
AATCAACAATGTCCGAATTCCCTACTCTCCAGCCCGCCTTCACCTTCAAG
GTACAGCCTCCAATACAAAACCCCCGCGTGCCCACACAACTAATAGTGTG
TCCCCCAACATAGGTCACAATTGATGCTCCGCTAGGCGTCGGTAAGTTCT
CAAGCCATCTACTGAGTAGACAAGGATCATAGCTCAAGAGAACTGACTAA
ATTCTTTAAGGCAGCGCATCTCGGCAGAACAGCCTGCAGGTCGTCGTAAG
CACCCACCAACTCTTCCTTTCCTTCTCACAAGACCATTCCCACTAACAAT
CCAGCATGACTGAAGCCCATGACCGGCGGCACTGTCCAGAGTGCGCCTGG
ATTCTCCCCTGCTCTTGATGCCGAGTTCGTCGGTGTTGGCAACGATTACA
TCCATGCGGATGCCGATGGCAAGCACCTGCGTCTGGATGCGCATGGTGTT
ATCAAGTGAGTTGTTACCTTGCTGAAGGCGTACGTTTCCATTCTAATGAC
TAAATCTAGGCCCAAGGATGGCGATGATGTACGTGAATTGCATCTCGCAT
CTCTCAAGAGTAATAACTAACGCCAGTCATCTACTATAGCTCATCTACCT
GAACTACACTGGTGTCTGCACCCTGCTTCCCGAAGTGCAGGCCGTCTTCG
CCGGAGCTGCTCCTGATGGCTCGACCCCGTTCAACAGTGCTTGTAAGTCT
ATTACTCGCACAAAATGAAAGCAGAGGCTAATGCTGGTACTCTAGTCACG
CACATTACCTTCGAGGTGAGATATACCGCATACAAGCCCGGATAACTAAC
ATACCAATTAACAAACCACAACAAAATACAGACCGGCAGCGAACGCTACA
AGGAGCTCGAGAACCGCGTCTTCATCGCCCAGGGACGCTTCAACGTTGAA
AAGGGCAAGCCCACTGTAGTCGAGTACCGCGTCAGCCAGGTTGTCCAGGG
CTAAATCTGCAAATATCATATTAGCAGAGTATTAGAATCAGAGGACAAAA
TTTACTGAATAAATAGAATCCAGTCAGATCTTCATAACATTGACATAAAG
AATATCATTCATATTACCAC
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Coding sequence (CDS) from alignment at ch8:2539069..2540388-

>KJC3_012088-T1 ID=KJC3_012088-T1|Name=KJC3_012088-T1|organism=Aspergillus niger KJC3|type=CDS|length=4080bp|location=Sequence derived from alignment at ch8:2539069..2540388- (Aspergillus niger KJC3)
ACCGGCAGCGAACGCTACAAGGAGCTCGAGAACCGCGTCTTCATCGCCCA
GGGACGCTTCAACGTTGAAAAGGGCAAGCCCACTGTAGTCGAGTACCGCG
TCAGCCAGGTTGTCCAGGGCTAATCACGCACATTACCTTCGAGCTCATCT
ACCTGAACTACACTGGTGTCTGCACCCTGCTTCCCGAAGTGCAGGCCGTC
TTCGCCGGAGCTGCTCCTGATGGCTCGACCCCGTTCAACAGTGCTTGCCC
AAGGATGGCGATGATCCCATGACCGGCGGCACTGTCCAGAGTGCGCCTGG
ATTCTCCCCTGCTCTTGATGCCGAGTTCGTCGGTGTTGGCAACGATTACA
TCCATGCGGATGCCGATGGCAAGCACCTGCGTCTGGATGCGCATGGTGTT
ATCAAGCAGCGCATCTCGGCAGAACAGCCTGCAGGTCGTCGTCACAATTG
ATGCTCCGCTAGGCGTCGATGTCCGAATTCCCTACTCTCCAGCCCGCCTT
CACCTTCAAGACCGGCAGCGAACGCTACAAGGAGCTCGAGAACCGCGTCT
TCATCGCCCAGGGACGCTTCAACGTTGAAAAGGGCAAGCCCACTGTAGTC
GAGTACCGCGTCAGCCAGGTTGTCCAGGGCTAATCACGCACATTACCTTC
GAGCTCATCTACCTGAACTACACTGGTGTCTGCACCCTGCTTCCCGAAGT
GCAGGCCGTCTTCGCCGGAGCTGCTCCTGATGGCTCGACCCCGTTCAACA
GTGCTTGCCCAAGGATGGCGATGATCCCATGACCGGCGGCACTGTCCAGA
GTGCGCCTGGATTCTCCCCTGCTCTTGATGCCGAGTTCGTCGGTGTTGGC
AACGATTACATCCATGCGGATGCCGATGGCAAGCACCTGCGTCTGGATGC
GCATGGTGTTATCAAGCAGCGCATCTCGGCAGAACAGCCTGCAGGTCGTC
GTCACAATTGATGCTCCGCTAGGCGTCGATGTCCGAATTCCCTACTCTCC
AGCCCGCCTTCACCTTCAAGACCGGCAGCGAACGCTACAAGGAGCTCGAG
AACCGCGTCTTCATCGCCCAGGGACGCTTCAACGTTGAAAAGGGCAAGCC
CACTGTAGTCGAGTACCGCGTCAGCCAGGTTGTCCAGGGCTAATCACGCA
CATTACCTTCGAGCTCATCTACCTGAACTACACTGGTGTCTGCACCCTGC
TTCCCGAAGTGCAGGCCGTCTTCGCCGGAGCTGCTCCTGATGGCTCGACC
CCGTTCAACAGTGCTTGCCCAAGGATGGCGATGATCCCATGACCGGCGGC
ACTGTCCAGAGTGCGCCTGGATTCTCCCCTGCTCTTGATGCCGAGTTCGT
CGGTGTTGGCAACGATTACATCCATGCGGATGCCGATGGCAAGCACCTGC
GTCTGGATGCGCATGGTGTTATCAAGCAGCGCATCTCGGCAGAACAGCCT
GCAGGTCGTCGTCACAATTGATGCTCCGCTAGGCGTCGATGTCCGAATTC
CCTACTCTCCAGCCCGCCTTCACCTTCAAGACCGGCAGCGAACGCTACAA
GGAGCTCGAGAACCGCGTCTTCATCGCCCAGGGACGCTTCAACGTTGAAA
AGGGCAAGCCCACTGTAGTCGAGTACCGCGTCAGCCAGGTTGTCCAGGGC
TAATCACGCACATTACCTTCGAGCTCATCTACCTGAACTACACTGGTGTC
TGCACCCTGCTTCCCGAAGTGCAGGCCGTCTTCGCCGGAGCTGCTCCTGA
TGGCTCGACCCCGTTCAACAGTGCTTGCCCAAGGATGGCGATGATCCCAT
GACCGGCGGCACTGTCCAGAGTGCGCCTGGATTCTCCCCTGCTCTTGATG
CCGAGTTCGTCGGTGTTGGCAACGATTACATCCATGCGGATGCCGATGGC
AAGCACCTGCGTCTGGATGCGCATGGTGTTATCAAGCAGCGCATCTCGGC
AGAACAGCCTGCAGGTCGTCGTCACAATTGATGCTCCGCTAGGCGTCGAT
GTCCGAATTCCCTACTCTCCAGCCCGCCTTCACCTTCAAGACCGGCAGCG
AACGCTACAAGGAGCTCGAGAACCGCGTCTTCATCGCCCAGGGACGCTTC
AACGTTGAAAAGGGCAAGCCCACTGTAGTCGAGTACCGCGTCAGCCAGGT
TGTCCAGGGCTAATCACGCACATTACCTTCGAGCTCATCTACCTGAACTA
CACTGGTGTCTGCACCCTGCTTCCCGAAGTGCAGGCCGTCTTCGCCGGAG
CTGCTCCTGATGGCTCGACCCCGTTCAACAGTGCTTGCCCAAGGATGGCG
ATGATCCCATGACCGGCGGCACTGTCCAGAGTGCGCCTGGATTCTCCCCT
GCTCTTGATGCCGAGTTCGTCGGTGTTGGCAACGATTACATCCATGCGGA
TGCCGATGGCAAGCACCTGCGTCTGGATGCGCATGGTGTTATCAAGCAGC
GCATCTCGGCAGAACAGCCTGCAGGTCGTCGTCACAATTGATGCTCCGCT
AGGCGTCGATGTCCGAATTCCCTACTCTCCAGCCCGCCTTCACCTTCAAG
ACCGGCAGCGAACGCTACAAGGAGCTCGAGAACCGCGTCTTCATCGCCCA
GGGACGCTTCAACGTTGAAAAGGGCAAGCCCACTGTAGTCGAGTACCGCG
TCAGCCAGGTTGTCCAGGGCTAATCACGCACATTACCTTCGAGCTCATCT
ACCTGAACTACACTGGTGTCTGCACCCTGCTTCCCGAAGTGCAGGCCGTC
TTCGCCGGAGCTGCTCCTGATGGCTCGACCCCGTTCAACAGTGCTTGCCC
AAGGATGGCGATGATCCCATGACCGGCGGCACTGTCCAGAGTGCGCCTGG
ATTCTCCCCTGCTCTTGATGCCGAGTTCGTCGGTGTTGGCAACGATTACA
TCCATGCGGATGCCGATGGCAAGCACCTGCGTCTGGATGCGCATGGTGTT
ATCAAGCAGCGCATCTCGGCAGAACAGCCTGCAGGTCGTCGTCACAATTG
ATGCTCCGCTAGGCGTCGATGTCCGAATTCCCTACTCTCCAGCCCGCCTT
CACCTTCAAGACCGGCAGCGAACGCTACAAGGAGCTCGAGAACCGCGTCT
TCATCGCCCAGGGACGCTTCAACGTTGAAAAGGGCAAGCCCACTGTAGTC
GAGTACCGCGTCAGCCAGGTTGTCCAGGGCTAATCACGCACATTACCTTC
GAGCTCATCTACCTGAACTACACTGGTGTCTGCACCCTGCTTCCCGAAGT
GCAGGCCGTCTTCGCCGGAGCTGCTCCTGATGGCTCGACCCCGTTCAACA
GTGCTTGCCCAAGGATGGCGATGATCCCATGACCGGCGGCACTGTCCAGA
GTGCGCCTGGATTCTCCCCTGCTCTTGATGCCGAGTTCGTCGGTGTTGGC
AACGATTACATCCATGCGGATGCCGATGGCAAGCACCTGCGTCTGGATGC
GCATGGTGTTATCAAGCAGCGCATCTCGGCAGAACAGCCTGCAGGTCGTC
GTCACAATTGATGCTCCGCTAGGCGTCGATGTCCGAATTCCCTACTCTCC
AGCCCGCCTTCACCTTCAAGACCGGCAGCGAACGCTACAAGGAGCTCGAG
AACCGCGTCTTCATCGCCCAGGGACGCTTCAACGTTGAAAAGGGCAAGCC
CACTGTAGTCGAGTACCGCGTCAGCCAGGTTGTCCAGGGCTAATCACGCA
CATTACCTTCGAGCTCATCTACCTGAACTACACTGGTGTCTGCACCCTGC
TTCCCGAAGTGCAGGCCGTCTTCGCCGGAGCTGCTCCTGATGGCTCGACC
CCGTTCAACAGTGCTTGCCCAAGGATGGCGATGATCCCATGACCGGCGGC
ACTGTCCAGAGTGCGCCTGGATTCTCCCCTGCTCTTGATGCCGAGTTCGT
CGGTGTTGGCAACGATTACATCCATGCGGATGCCGATGGCAAGCACCTGC
GTCTGGATGCGCATGGTGTTATCAAGCAGCGCATCTCGGCAGAACAGCCT
GCAGGTCGTCGTCACAATTGATGCTCCGCTAGGCGTCGATGTCCGAATTC
CCTACTCTCCAGCCCGCCTTCACCTTCAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012088KJC3_012088Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012088-T1KJC3_012088-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012088-T1.cdsKJC3_012088-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012088-T1.utr3p1KJC3_012088-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012088-T1.exon8KJC3_012088-T1.exon8Aspergillus niger KJC3exon
KJC3_012088-T1.exon7KJC3_012088-T1.exon7Aspergillus niger KJC3exon
KJC3_012088-T1.exon6KJC3_012088-T1.exon6Aspergillus niger KJC3exon
KJC3_012088-T1.exon5KJC3_012088-T1.exon5Aspergillus niger KJC3exon
KJC3_012088-T1.exon4KJC3_012088-T1.exon4Aspergillus niger KJC3exon
KJC3_012088-T1.exon3KJC3_012088-T1.exon3Aspergillus niger KJC3exon
KJC3_012088-T1.exon2KJC3_012088-T1.exon2Aspergillus niger KJC3exon
KJC3_012088-T1.exon1KJC3_012088-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012088-T1.utr5p1KJC3_012088-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefPFAM:PF11578
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2539069..2540388 -
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