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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2545657..2547018+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012090-T1 ID=KJC3_012090-T1|Name=KJC3_012090-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1362bp|location=Sequence derived from alignment at ch8:2545657..2547018+ (Aspergillus niger KJC3)
AACCGTTTTGCGCGCGCGTCCGAGGTAAGGCTCCCGATCCCTTGGCGCTT
TGCATGTTTCACTCCGATGCATCTACTGTTTATATGAGTGCGGTGGGCAA
GCTGTGCCCACCGACTGAGCATTCTCAACCGGCCCAATGCTGTGGGATCG
ATCCTCCCCTCCAAAGTTGTCGCTCGGTTACACTTGATCGGAGCTTGTTC
TGTTATACACCAAACCATCATGGATGTGACTAATTTGGCTGTCGATTGTC
CCGTTATAGAGACCGGTTCCCTTGCTTTGTGGATGGCTTCCTCCGAAGTG
GACCAGAAGGCCTTGGGCAACTTTGCGGCCATAACGGGCCTCGAGAACCC
GTTCCTGTCCGCGATGCTGTACAAGATTCTGGGGTTGTCTGTTATGTTAT
CGAAGAAACTCCTCCGTGCACGACGATTGCGGCGCCTAGACCCCACCCGA
GAGACTAAATCGCTTCATCTTTATTACCATATCATCTGGCTTTCGCGTGA
GGGTCTTCTGATATTAGAGGAGTTCGTCCTGCCACTGGTTGAGGGATTTA
TGGAACTCAAAATTTTAGCTTACAAGCTGCGCGCCTCCTTTTACCATATA
TTCGTCCTATTTCAGAACCAGCCTGCTGTCCACTCGCCGGGTATCGTTAG
TCTGCCGAGTAGTACACCTTTATCCAACGGCGTGACAGAAGCGGAGTCAC
CATCCAAGGATTCCAATTTGAGATTTTCATTTCAGCTGAAGCCCGACACG
ATAACGGTTTCCGGGAAGCCCAGTTCCGCCTCGGATAGTGCGCCACGAGG
CAAGGTTACGCAGGCACCCCCGGGCTTTGCGCCGGTTCAACCGCCCAAGT
CGAACTCGGCGTTTCTCCTCCCTGCTCTCGATTATACCCCTACAGCTACC
GCATGCTTCAATCATGCCGCCCTCTTGGCAGATCAATTCCTCCCGGGGTC
GCACCCGCTCCGTCTGTCCATCAAGCTTGAATTTGCCGCCTACCTCTACG
ATTGCCTACATGACGCTCATGCCTGTCGACGGTTGGCCAAGCAAGCCATT
GCCGATGTGTACAATGCGCAAGAGGGCATGGACGACGAGAGCTTCGAGGA
TGCAGCTGAGATTGTGGGTATTTTGGGCAAGATGGTGAAGCGGGGAAGGA
ACACAAGCAGTGCTGGAAATAGCACCACGGCTGTGAAAACGCCCCAGGAG
GAGCGAAGTGAGGGCAGTCGAACACCATCCTCTCAGACAACGTTGAAAAG
GCCGGCGCGAGTGCCGAAAAGCACCTCCTCACCGGCGCGCGCGACCAAGC
CGACGACTAGCGAGGGGATGTCCCCCGCTGTGCCCGACCCCACCATGATG
AATCCCATATGA back to topCoding sequence (CDS) from alignment at ch8:2545657..2547018+ >KJC3_012090-T1 ID=KJC3_012090-T1|Name=KJC3_012090-T1|organism=Aspergillus niger KJC3|type=CDS|length=1143bp|location=Sequence derived from alignment at ch8:2545657..2547018+ (Aspergillus niger KJC3)
ATGGATGTGACTAATTTGGCTGTCGATTGTCCCGTTATAGAGACCGGTTC
CCTTGCTTTGTGGATGGCTTCCTCCGAAGTGGACCAGAAGGCCTTGGGCA
ACTTTGCGGCCATAACGGGCCTCGAGAACCCGTTCCTGTCCGCGATGCTG
TACAAGATTCTGGGGTTGTCTGTTATGTTATCGAAGAAACTCCTCCGTGC
ACGACGATTGCGGCGCCTAGACCCCACCCGAGAGACTAAATCGCTTCATC
TTTATTACCATATCATCTGGCTTTCGCGTGAGGGTCTTCTGATATTAGAG
GAGTTCGTCCTGCCACTGGTTGAGGGATTTATGGAACTCAAAATTTTAGC
TTACAAGCTGCGCGCCTCCTTTTACCATATATTCGTCCTATTTCAGAACC
AGCCTGCTGTCCACTCGCCGGGTATCGTTAGTCTGCCGAGTAGTACACCT
TTATCCAACGGCGTGACAGAAGCGGAGTCACCATCCAAGGATTCCAATTT
GAGATTTTCATTTCAGCTGAAGCCCGACACGATAACGGTTTCCGGGAAGC
CCAGTTCCGCCTCGGATAGTGCGCCACGAGGCAAGGTTACGCAGGCACCC
CCGGGCTTTGCGCCGGTTCAACCGCCCAAGTCGAACTCGGCGTTTCTCCT
CCCTGCTCTCGATTATACCCCTACAGCTACCGCATGCTTCAATCATGCCG
CCCTCTTGGCAGATCAATTCCTCCCGGGGTCGCACCCGCTCCGTCTGTCC
ATCAAGCTTGAATTTGCCGCCTACCTCTACGATTGCCTACATGACGCTCA
TGCCTGTCGACGGTTGGCCAAGCAAGCCATTGCCGATGTGTACAATGCGC
AAGAGGGCATGGACGACGAGAGCTTCGAGGATGCAGCTGAGATTGTGGGT
ATTTTGGGCAAGATGGTGAAGCGGGGAAGGAACACAAGCAGTGCTGGAAA
TAGCACCACGGCTGTGAAAACGCCCCAGGAGGAGCGAAGTGAGGGCAGTC
GAACACCATCCTCTCAGACAACGTTGAAAAGGCCGGCGCGAGTGCCGAAA
AGCACCTCCTCACCGGCGCGCGCGACCAAGCCGACGACTAGCGAGGGGAT
GTCCCCCGCTGTGCCCGACCCCACCATGATGAATCCCATATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012090-T1.utr5p1 | KJC3_012090-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036815 |
| DBxref | InterPro:IPR023410 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2545657..2547018 + |
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