You are here

Home

KJC3_012091-T1, KJC3_012091-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012091-T1
Unique NameKJC3_012091-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2548376..2549507+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012091-T1 ID=KJC3_012091-T1|Name=KJC3_012091-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1132bp|location=Sequence derived from alignment at ch8:2548376..2549507+ (Aspergillus niger KJC3)
ATGCGGTCGGGGCTTCAGAAACCTGGGGCCATTCCGTTTCTTGCTCTTTT
GGTCTTTTCGCTATTTAGTCTGGTGCCGTCGCTAGCAAAGGAATGGGATT
TGTATAACGTGCGCCTGGGGTATATTGGCTATCGCAACGATGTTCGACGT
ATGCATTCCTTATTTCTTCTTCTTCTTTTCCCCTCCCCCTTTTCTTCCCC
CCATGTGTTTGGCTGAGTCAGACAAAGCTAACGGTGGTACTTCTGCAGAT
GTCTCTCGGGTAAAAGATAACTGGGCCGATGTTCGAACAACAAGATCTCG
GGTTTCTGGGACTGGCTGGAAGCCATGGCTTCTAGATGGATATTATCAGG
AATTCTATGAGCGCAAAGCTCGTCCGCGACGTTGTGCGGTGGACGCGCCC
TCTCGGAGCTCCTTCGAGGCTGCTGCCGTCTTCGATACCGATCCTTTGGC
ATTTCCGGCCCGAGAATCCTCGGCTTTCACTCGGGGGGTGCGCGCGTTTA
AGGCAATGGTCATCAGGCAGCCGGATGAGTCGCAATTACTTCCGACATTC
TCGGCGGAGGGTGATGCCATTGAACAATTACCTACCCGGCTAAGTGCGCT
CGTTAATTCCTCAGTTACTGCGGCTGCTCCTCCCGACGACGGACTTTTCG
GGGTGTCGCCTACGAGCAATTCCATGATACCGGCCACCAGCAGCGTGATT
GAGGTATCCCGATGGTTGCTGGGGTTGTCCCGTGCCTCATGGCAGCAGGT
CTGCCGCGCGGGGAGCGAGTATCTGGAGAACATGCCTGCTTGGCCTAGCC
TTCGCGAAGCCAGCCAACCCATCGACCTCTCACGACACGACAACCACACC
ACCTCCTCTCATCCGACAGTTCCACATAACCACACGCCCCGCGAACAACC
TATACCCCCCAAAGCAGCAGTCGTGAATCGCAGCGACGACGTCGACGATC
CCAGTCAATCCGCATCAACGCCAAGCGCTACGCCGCCCCCGCCGGCGCTC
TCCCAAAACAGCACCGCAACGACTGCTGGCCAGTCCAAAGTTGCGGGATT
TCAGCAAGAGACGGAGCACATGCGCCGGGGAAGCTGCATGGCCATAGTGA
TCGGCCTAGTGGTGGGCGTGATGTGGTTCTAG
back to top

Coding sequence (CDS) from alignment at ch8:2548376..2549507+

>KJC3_012091-T1 ID=KJC3_012091-T1|Name=KJC3_012091-T1|organism=Aspergillus niger KJC3|type=CDS|length=2064bp|location=Sequence derived from alignment at ch8:2548376..2549507+ (Aspergillus niger KJC3)
ATGCGGTCGGGGCTTCAGAAACCTGGGGCCATTCCGTTTCTTGCTCTTTT
GGTCTTTTCGCTATTTAGTCTGGTGCCGTCGCTAGCAAAGGAATGGGATT
TGTATAACGTGCGCCTGGGGTATATTGGCTATCGCAACGATGTTCGACAT
GTCTCTCGGGTAAAAGATAACTGGGCCGATGTTCGAACAACAAGATCTCG
GGTTTCTGGGACTGGCTGGAAGCCATGGCTTCTAGATGGATATTATCAGG
AATTCTATGAGCGCAAAGCTCGTCCGCGACGTTGTGCGGTGGACGCGCCC
TCTCGGAGCTCCTTCGAGGCTGCTGCCGTCTTCGATACCGATCCTTTGGC
ATTTCCGGCCCGAGAATCCTCGGCTTTCACTCGGGGGGTGCGCGCGTTTA
AGGCAATGGTCATCAGGCAGCCGGATGAGTCGCAATTACTTCCGACATTC
TCGGCGGAGGGTGATGCCATTGAACAATTACCTACCCGGCTAAGTGCGCT
CGTTAATTCCTCAGTTACTGCGGCTGCTCCTCCCGACGACGGACTTTTCG
GGGTGTCGCCTACGAGCAATTCCATGATACCGGCCACCAGCAGCGTGATT
GAGGTATCCCGATGGTTGCTGGGGTTGTCCCGTGCCTCATGGCAGCAGGT
CTGCCGCGCGGGGAGCGAGTATCTGGAGAACATGCCTGCTTGGCCTAGCC
TTCGCGAAGCCAGCCAACCCATCGACCTCTCACGACACGACAACCACACC
ACCTCCTCTCATCCGACAGTTCCACATAACCACACGCCCCGCGAACAACC
TATACCCCCCAAAGCAGCAGTCGTGAATCGCAGCGACGACGTCGACGATC
CCAGTCAATCCGCATCAACGCCAAGCGCTACGCCGCCCCCGCCGGCGCTC
TCCCAAAACAGCACCGCAACGACTGCTGGCCAGTCCAAAGTTGCGGGATT
TCAGCAAGAGACGGAGCACATGCGCCGGGGAAGCTGCATGGCCATAGTGA
TCGGCCTAGTGGTGGGCGTGATGTGGTTCTAGATGCGGTCGGGGCTTCAG
AAACCTGGGGCCATTCCGTTTCTTGCTCTTTTGGTCTTTTCGCTATTTAG
TCTGGTGCCGTCGCTAGCAAAGGAATGGGATTTGTATAACGTGCGCCTGG
GGTATATTGGCTATCGCAACGATGTTCGACATGTCTCTCGGGTAAAAGAT
AACTGGGCCGATGTTCGAACAACAAGATCTCGGGTTTCTGGGACTGGCTG
GAAGCCATGGCTTCTAGATGGATATTATCAGGAATTCTATGAGCGCAAAG
CTCGTCCGCGACGTTGTGCGGTGGACGCGCCCTCTCGGAGCTCCTTCGAG
GCTGCTGCCGTCTTCGATACCGATCCTTTGGCATTTCCGGCCCGAGAATC
CTCGGCTTTCACTCGGGGGGTGCGCGCGTTTAAGGCAATGGTCATCAGGC
AGCCGGATGAGTCGCAATTACTTCCGACATTCTCGGCGGAGGGTGATGCC
ATTGAACAATTACCTACCCGGCTAAGTGCGCTCGTTAATTCCTCAGTTAC
TGCGGCTGCTCCTCCCGACGACGGACTTTTCGGGGTGTCGCCTACGAGCA
ATTCCATGATACCGGCCACCAGCAGCGTGATTGAGGTATCCCGATGGTTG
CTGGGGTTGTCCCGTGCCTCATGGCAGCAGGTCTGCCGCGCGGGGAGCGA
GTATCTGGAGAACATGCCTGCTTGGCCTAGCCTTCGCGAAGCCAGCCAAC
CCATCGACCTCTCACGACACGACAACCACACCACCTCCTCTCATCCGACA
GTTCCACATAACCACACGCCCCGCGAACAACCTATACCCCCCAAAGCAGC
AGTCGTGAATCGCAGCGACGACGTCGACGATCCCAGTCAATCCGCATCAA
CGCCAAGCGCTACGCCGCCCCCGCCGGCGCTCTCCCAAAACAGCACCGCA
ACGACTGCTGGCCAGTCCAAAGTTGCGGGATTTCAGCAAGAGACGGAGCA
CATGCGCCGGGGAAGCTGCATGGCCATAGTGATCGGCCTAGTGGTGGGCG
TGATGTGGTTCTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012091KJC3_012091Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012091-T1.exon1KJC3_012091-T1.exon1Aspergillus niger KJC3exon
KJC3_012091-T1.exon2KJC3_012091-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012091-T1.cdsKJC3_012091-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012091-T1KJC3_012091-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-29)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2548376..2549507 +
Powered by Drupal