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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2549865..2552046- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012092-T1 ID=KJC3_012092-T1|Name=KJC3_012092-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2182bp|location=Sequence derived from alignment at ch8:2549865..2552046- (Aspergillus niger KJC3)
CGTGACTCGATTTCTGTTATTGTGGGCTGTTCCCCTGAACTCACCATGTC
AGGTCAAAAAGATTCGCTCATCTAGTGTGTCGGTCAATCAGTCGCTCGTT
TAATTTTCACTCGTTTTTCGTTCATATCAAAGGCTCTCCAATATGGAGAG
ATCCGACAGCATTTCTCTGCGCAGCATCGAGGCCTCTCAGCCCCAAGAAC
AGGCCACCGACAAGAACGAGACCAAAGACAACAATCAAGGTGCAACAACC
GCAGCTCCAGCTCCCCAGTACCCATCAGGGATCAAATACTATCTCGCAGT
TGCAACCTTGTGTCTGGCAATCTTCCTCGTCACCTTGGTATGCCCTCTCC
AAGCTGAGTACTACATGCACTAACACGCGAACCCTACATCTAGGACAGCA
CCATCATCGCGACGGCGACGCCCTATATCTCCGACGACTTCCACTCTCTC
GGGGATGTCGGCTGGTACAGTAGCGTCTACACCATGCTCATCTGCACGAC
CCAACTCCTCTTTGGCAAACTCCTCGCCCGCTACTCCGTCCGCTGGATAT
ACAGCATCTCAATGCTCTTCTTCCTCGTAGGCTCCGCCGTCTGCGGCGCC
GCGCCCAACTCCCACTCCCTCATCATCGGCCGCGCCCTGGCCGGCGTAGG
CTGCTCAGGTCTCCTAGTCGCTGCCTTCTCTCTCGTCCCGATCCTCGTCG
CCCCAGCCAAACGCCCTATCATCCTCGGTCTTCTCTCAGGCTCCCGCGGA
CTCGCCACGACATTCGGACCTCTAATCGGAGGTGTTCTCACTGAAAAGGT
CTCCTGGCGGTGGAACTTCTACATCAACCTCCCCATAGGCGCCGTCATCC
AAATTGCCTTTTTCCTTCTAGTCCATCCGCCCAAACGAGACCACGAAGCC
TTCACCTCCTGGACAGAGTTCCTCAGGACCCTCGATCTATTCGGTCTCGT
GGCTCTTCTTCCATCCATCGTCTGCCTCCTTCTAGCCCTGCAATGGGGCG
GCCTCAAATACGCCTGGCAAGACGCCCGTATCATCGTACTGCTAGTCCTA
GCAGGCATCCTCGCCATTGCATTCATCAGCGTCGAAATCTGGCAAGGCCC
CAAAGCCATGCTCCCCTCGCGGGTCTTCACCCAACGCACCGTCTCAGCAG
CATCCTTCTTTGGTTTCTGCACAGTCAGCGCCATCTTCGTGCTCACTTAC
TACCTCCCCATGTACCTCCCTTTCTCTTCTCCCTTCTCACACCCCCCACA
ACCAACTGACCTGAAATAGCTGGTTCCAAGGCGTCAAATCCGCCACCCCC
ATCCAATCCGGAATCTGGACCCTCCCGTGGGTAATAACCAGCACGATCGT
CTCCCTCGCCGGCGGGATCCTAATGTCCAAAGTCGGCCACCCGGACTTAT
TCATGGGAATAGCAACGATCTTCGGCGCCATAGGCTCCGGCCTCTTCACC
TCCTTCACAGTCGACACATCCACAGGGAAATGGATCGGATATCAGATCAT
CTTCGCCGTGTCGTCGAGTCTATGTAGTGTGACCCCGTTGATGGTGGCGC
AGCAGGCACTGCCGTTGAAGGATATTCCTATTGGGTCGGGGTTGGTGATG
TTTTCGCAGACAGTGGGAGCGTATGTATCCATTCCTCTTTATCACTATTC
CAAGGCGGAAATGAACTAACTGACACCGTCATGACGGTATGTGTAGGTCT
ATATTTGTTGCCGTCGCCCAAGCCCTCTTCACCAATGAGCTGAGTGCCGG
GTTGGAAGGGACCGCTGTGGGTGGTGGACTTGACGTGAGTAGGTTATTGT
CTGGTGGGATTTCGACTCTTACGGAGGGGTTGTCGGGGCAAGGGAAGCGG
GCGGTGTTGGTGGTGCTGAATGAGGCGTTGACGAGGTCGTGGCAGCTCGC
TGTGGTGTTGGAATGCGTGGCGGTGATTGGGGTGTTGGCGGTGGTGCATG
GGATGAGGATGAAGAGGGTGGGTAGTAGTACTTCGTTGTAGTTGGTCGTT
AGCTTTTAGCTTGGTCTTTTGGGCGAGGTGAGATGGGATGGCAAGTAGTA
CGGTGCAGTGCGGGGTGGTTGTATGGGTAGTATATAGGCAGTATAGTAGT
TGAAATATAGGTAGTATGATGGTGTTAGTGCATCTATCCCATCATCCTTG
CTGAAAGAATATATGAGGTGTGAGAATGTGGG back to topCoding sequence (CDS) from alignment at ch8:2549865..2552046- >KJC3_012092-T1 ID=KJC3_012092-T1|Name=KJC3_012092-T1|organism=Aspergillus niger KJC3|type=CDS|length=6636bp|location=Sequence derived from alignment at ch8:2549865..2552046- (Aspergillus niger KJC3)
GTCTATATTTGTTGCCGTCGCCCAAGCCCTCTTCACCAATGAGCTGAGTG
CCGGGTTGGAAGGGACCGCTGTGGGTGGTGGACTTGACGTGAGTAGGTTA
TTGTCTGGTGGGATTTCGACTCTTACGGAGGGGTTGTCGGGGCAAGGGAA
GCGGGCGGTGTTGGTGGTGCTGAATGAGGCGTTGACGAGGTCGTGGCAGC
TCGCTGTGGTGTTGGAATGCGTGGCGGTGATTGGGGTGTTGGCGGTGGTG
CATGGGATGAGGATGAAGAGGGTGGGTAGTAGTACTTCGTTGTAGCTGGT
TCCAAGGCGTCAAATCCGCCACCCCCATCCAATCCGGAATCTGGACCCTC
CCGTGGGTAATAACCAGCACGATCGTCTCCCTCGCCGGCGGGATCCTAAT
GTCCAAAGTCGGCCACCCGGACTTATTCATGGGAATAGCAACGATCTTCG
GCGCCATAGGCTCCGGCCTCTTCACCTCCTTCACAGTCGACACATCCACA
GGGAAATGGATCGGATATCAGATCATCTTCGCCGTGTCGTCGAGTCTATG
TAGTGTGACCCCGTTGATGGTGGCGCAGCAGGCACTGCCGTTGAAGGATA
TTCCTATTGGGTCGGGGTTGGTGATGTTTTCGCAGACAGTGGGAGCGACA
GCACCATCATCGCGACGGCGACGCCCTATATCTCCGACGACTTCCACTCT
CTCGGGGATGTCGGCTGGTACAGTAGCGTCTACACCATGCTCATCTGCAC
GACCCAACTCCTCTTTGGCAAACTCCTCGCCCGCTACTCCGTCCGCTGGA
TATACAGCATCTCAATGCTCTTCTTCCTCGTAGGCTCCGCCGTCTGCGGC
GCCGCGCCCAACTCCCACTCCCTCATCATCGGCCGCGCCCTGGCCGGCGT
AGGCTGCTCAGGTCTCCTAGTCGCTGCCTTCTCTCTCGTCCCGATCCTCG
TCGCCCCAGCCAAACGCCCTATCATCCTCGGTCTTCTCTCAGGCTCCCGC
GGACTCGCCACGACATTCGGACCTCTAATCGGAGGTGTTCTCACTGAAAA
GGTCTCCTGGCGGTGGAACTTCTACATCAACCTCCCCATAGGCGCCGTCA
TCCAAATTGCCTTTTTCCTTCTAGTCCATCCGCCCAAACGAGACCACGAA
GCCTTCACCTCCTGGACAGAGTTCCTCAGGACCCTCGATCTATTCGGTCT
CGTGGCTCTTCTTCCATCCATCGTCTGCCTCCTTCTAGCCCTGCAATGGG
GCGGCCTCAAATACGCCTGGCAAGACGCCCGTATCATCGTACTGCTAGTC
CTAGCAGGCATCCTCGCCATTGCATTCATCAGCGTCGAAATCTGGCAAGG
CCCCAAAGCCATGCTCCCCTCGCGGGTCTTCACCCAACGCACCGTCTCAG
CAGCATCCTTCTTTGGTTTCTGCACAGTCAGCGCCATCTTCGTGCTCACT
TACTACCTCCCCATATGGAGAGATCCGACAGCATTTCTCTGCGCAGCATC
GAGGCCTCTCAGCCCCAAGAACAGGCCACCGACAAGAACGAGACCAAAGA
CAACAATCAAGGTGCAACAACCGCAGCTCCAGCTCCCCAGTACCCATCAG
GGATCAAATACTATCTCGCAGTTGCAACCTTGTGTCTGGCAATCTTCCTC
GTCACCTTGGTCTATATTTGTTGCCGTCGCCCAAGCCCTCTTCACCAATG
AGCTGAGTGCCGGGTTGGAAGGGACCGCTGTGGGTGGTGGACTTGACGTG
AGTAGGTTATTGTCTGGTGGGATTTCGACTCTTACGGAGGGGTTGTCGGG
GCAAGGGAAGCGGGCGGTGTTGGTGGTGCTGAATGAGGCGTTGACGAGGT
CGTGGCAGCTCGCTGTGGTGTTGGAATGCGTGGCGGTGATTGGGGTGTTG
GCGGTGGTGCATGGGATGAGGATGAAGAGGGTGGGTAGTAGTACTTCGTT
GTAGCTGGTTCCAAGGCGTCAAATCCGCCACCCCCATCCAATCCGGAATC
TGGACCCTCCCGTGGGTAATAACCAGCACGATCGTCTCCCTCGCCGGCGG
GATCCTAATGTCCAAAGTCGGCCACCCGGACTTATTCATGGGAATAGCAA
CGATCTTCGGCGCCATAGGCTCCGGCCTCTTCACCTCCTTCACAGTCGAC
ACATCCACAGGGAAATGGATCGGATATCAGATCATCTTCGCCGTGTCGTC
GAGTCTATGTAGTGTGACCCCGTTGATGGTGGCGCAGCAGGCACTGCCGT
TGAAGGATATTCCTATTGGGTCGGGGTTGGTGATGTTTTCGCAGACAGTG
GGAGCGACAGCACCATCATCGCGACGGCGACGCCCTATATCTCCGACGAC
TTCCACTCTCTCGGGGATGTCGGCTGGTACAGTAGCGTCTACACCATGCT
CATCTGCACGACCCAACTCCTCTTTGGCAAACTCCTCGCCCGCTACTCCG
TCCGCTGGATATACAGCATCTCAATGCTCTTCTTCCTCGTAGGCTCCGCC
GTCTGCGGCGCCGCGCCCAACTCCCACTCCCTCATCATCGGCCGCGCCCT
GGCCGGCGTAGGCTGCTCAGGTCTCCTAGTCGCTGCCTTCTCTCTCGTCC
CGATCCTCGTCGCCCCAGCCAAACGCCCTATCATCCTCGGTCTTCTCTCA
GGCTCCCGCGGACTCGCCACGACATTCGGACCTCTAATCGGAGGTGTTCT
CACTGAAAAGGTCTCCTGGCGGTGGAACTTCTACATCAACCTCCCCATAG
GCGCCGTCATCCAAATTGCCTTTTTCCTTCTAGTCCATCCGCCCAAACGA
GACCACGAAGCCTTCACCTCCTGGACAGAGTTCCTCAGGACCCTCGATCT
ATTCGGTCTCGTGGCTCTTCTTCCATCCATCGTCTGCCTCCTTCTAGCCC
TGCAATGGGGCGGCCTCAAATACGCCTGGCAAGACGCCCGTATCATCGTA
CTGCTAGTCCTAGCAGGCATCCTCGCCATTGCATTCATCAGCGTCGAAAT
CTGGCAAGGCCCCAAAGCCATGCTCCCCTCGCGGGTCTTCACCCAACGCA
CCGTCTCAGCAGCATCCTTCTTTGGTTTCTGCACAGTCAGCGCCATCTTC
GTGCTCACTTACTACCTCCCCATATGGAGAGATCCGACAGCATTTCTCTG
CGCAGCATCGAGGCCTCTCAGCCCCAAGAACAGGCCACCGACAAGAACGA
GACCAAAGACAACAATCAAGGTGCAACAACCGCAGCTCCAGCTCCCCAGT
ACCCATCAGGGATCAAATACTATCTCGCAGTTGCAACCTTGTGTCTGGCA
ATCTTCCTCGTCACCTTGGTCTATATTTGTTGCCGTCGCCCAAGCCCTCT
TCACCAATGAGCTGAGTGCCGGGTTGGAAGGGACCGCTGTGGGTGGTGGA
CTTGACGTGAGTAGGTTATTGTCTGGTGGGATTTCGACTCTTACGGAGGG
GTTGTCGGGGCAAGGGAAGCGGGCGGTGTTGGTGGTGCTGAATGAGGCGT
TGACGAGGTCGTGGCAGCTCGCTGTGGTGTTGGAATGCGTGGCGGTGATT
GGGGTGTTGGCGGTGGTGCATGGGATGAGGATGAAGAGGGTGGGTAGTAG
TACTTCGTTGTAGCTGGTTCCAAGGCGTCAAATCCGCCACCCCCATCCAA
TCCGGAATCTGGACCCTCCCGTGGGTAATAACCAGCACGATCGTCTCCCT
CGCCGGCGGGATCCTAATGTCCAAAGTCGGCCACCCGGACTTATTCATGG
GAATAGCAACGATCTTCGGCGCCATAGGCTCCGGCCTCTTCACCTCCTTC
ACAGTCGACACATCCACAGGGAAATGGATCGGATATCAGATCATCTTCGC
CGTGTCGTCGAGTCTATGTAGTGTGACCCCGTTGATGGTGGCGCAGCAGG
CACTGCCGTTGAAGGATATTCCTATTGGGTCGGGGTTGGTGATGTTTTCG
CAGACAGTGGGAGCGACAGCACCATCATCGCGACGGCGACGCCCTATATC
TCCGACGACTTCCACTCTCTCGGGGATGTCGGCTGGTACAGTAGCGTCTA
CACCATGCTCATCTGCACGACCCAACTCCTCTTTGGCAAACTCCTCGCCC
GCTACTCCGTCCGCTGGATATACAGCATCTCAATGCTCTTCTTCCTCGTA
GGCTCCGCCGTCTGCGGCGCCGCGCCCAACTCCCACTCCCTCATCATCGG
CCGCGCCCTGGCCGGCGTAGGCTGCTCAGGTCTCCTAGTCGCTGCCTTCT
CTCTCGTCCCGATCCTCGTCGCCCCAGCCAAACGCCCTATCATCCTCGGT
CTTCTCTCAGGCTCCCGCGGACTCGCCACGACATTCGGACCTCTAATCGG
AGGTGTTCTCACTGAAAAGGTCTCCTGGCGGTGGAACTTCTACATCAACC
TCCCCATAGGCGCCGTCATCCAAATTGCCTTTTTCCTTCTAGTCCATCCG
CCCAAACGAGACCACGAAGCCTTCACCTCCTGGACAGAGTTCCTCAGGAC
CCTCGATCTATTCGGTCTCGTGGCTCTTCTTCCATCCATCGTCTGCCTCC
TTCTAGCCCTGCAATGGGGCGGCCTCAAATACGCCTGGCAAGACGCCCGT
ATCATCGTACTGCTAGTCCTAGCAGGCATCCTCGCCATTGCATTCATCAG
CGTCGAAATCTGGCAAGGCCCCAAAGCCATGCTCCCCTCGCGGGTCTTCA
CCCAACGCACCGTCTCAGCAGCATCCTTCTTTGGTTTCTGCACAGTCAGC
GCCATCTTCGTGCTCACTTACTACCTCCCCATATGGAGAGATCCGACAGC
ATTTCTCTGCGCAGCATCGAGGCCTCTCAGCCCCAAGAACAGGCCACCGA
CAAGAACGAGACCAAAGACAACAATCAAGGTGCAACAACCGCAGCTCCAG
CTCCCCAGTACCCATCAGGGATCAAATACTATCTCGCAGTTGCAACCTTG
TGTCTGGCAATCTTCCTCGTCACCTTGGTCTATATTTGTTGCCGTCGCCC
AAGCCCTCTTCACCAATGAGCTGAGTGCCGGGTTGGAAGGGACCGCTGTG
GGTGGTGGACTTGACGTGAGTAGGTTATTGTCTGGTGGGATTTCGACTCT
TACGGAGGGGTTGTCGGGGCAAGGGAAGCGGGCGGTGTTGGTGGTGCTGA
ATGAGGCGTTGACGAGGTCGTGGCAGCTCGCTGTGGTGTTGGAATGCGTG
GCGGTGATTGGGGTGTTGGCGGTGGTGCATGGGATGAGGATGAAGAGGGT
GGGTAGTAGTACTTCGTTGTAGCTGGTTCCAAGGCGTCAAATCCGCCACC
CCCATCCAATCCGGAATCTGGACCCTCCCGTGGGTAATAACCAGCACGAT
CGTCTCCCTCGCCGGCGGGATCCTAATGTCCAAAGTCGGCCACCCGGACT
TATTCATGGGAATAGCAACGATCTTCGGCGCCATAGGCTCCGGCCTCTTC
ACCTCCTTCACAGTCGACACATCCACAGGGAAATGGATCGGATATCAGAT
CATCTTCGCCGTGTCGTCGAGTCTATGTAGTGTGACCCCGTTGATGGTGG
CGCAGCAGGCACTGCCGTTGAAGGATATTCCTATTGGGTCGGGGTTGGTG
ATGTTTTCGCAGACAGTGGGAGCGACAGCACCATCATCGCGACGGCGACG
CCCTATATCTCCGACGACTTCCACTCTCTCGGGGATGTCGGCTGGTACAG
TAGCGTCTACACCATGCTCATCTGCACGACCCAACTCCTCTTTGGCAAAC
TCCTCGCCCGCTACTCCGTCCGCTGGATATACAGCATCTCAATGCTCTTC
TTCCTCGTAGGCTCCGCCGTCTGCGGCGCCGCGCCCAACTCCCACTCCCT
CATCATCGGCCGCGCCCTGGCCGGCGTAGGCTGCTCAGGTCTCCTAGTCG
CTGCCTTCTCTCTCGTCCCGATCCTCGTCGCCCCAGCCAAACGCCCTATC
ATCCTCGGTCTTCTCTCAGGCTCCCGCGGACTCGCCACGACATTCGGACC
TCTAATCGGAGGTGTTCTCACTGAAAAGGTCTCCTGGCGGTGGAACTTCT
ACATCAACCTCCCCATAGGCGCCGTCATCCAAATTGCCTTTTTCCTTCTA
GTCCATCCGCCCAAACGAGACCACGAAGCCTTCACCTCCTGGACAGAGTT
CCTCAGGACCCTCGATCTATTCGGTCTCGTGGCTCTTCTTCCATCCATCG
TCTGCCTCCTTCTAGCCCTGCAATGGGGCGGCCTCAAATACGCCTGGCAA
GACGCCCGTATCATCGTACTGCTAGTCCTAGCAGGCATCCTCGCCATTGC
ATTCATCAGCGTCGAAATCTGGCAAGGCCCCAAAGCCATGCTCCCCTCGC
GGGTCTTCACCCAACGCACCGTCTCAGCAGCATCCTTCTTTGGTTTCTGC
ACAGTCAGCGCCATCTTCGTGCTCACTTACTACCTCCCCATATGGAGAGA
TCCGACAGCATTTCTCTGCGCAGCATCGAGGCCTCTCAGCCCCAAGAACA
GGCCACCGACAAGAACGAGACCAAAGACAACAATCAAGGTGCAACAACCG
CAGCTCCAGCTCCCCAGTACCCATCAGGGATCAAATACTATCTCGCAGTT
GCAACCTTGTGTCTGGCAATCTTCCTCGTCACCTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012092-T1.utr3p1 | KJC3_012092-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012092-T1.utr5p1 | KJC3_012092-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2549865..2552046 - |
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