You are here

Home

KJC3_012103-T1, KJC3_012103-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012103-T1
Unique NameKJC3_012103-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2572289..2574724+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012103-T1 ID=KJC3_012103-T1|Name=KJC3_012103-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2436bp|location=Sequence derived from alignment at ch8:2572289..2574724+ (Aspergillus niger KJC3)
ATGCCTGCCCGTTCGAAGAGGTATCAGGTCGATGCATCATCGCCCTATTC
GAGCGACAGCCGCGATGTCGTCGACATTGAGAAGCAACCATCGAGGCCGA
GGCGCCACTACCGTCGTGATAGCTACAGCTCGTATGATTCGGACAGTGAA
GATGACTCGGCAAGCTCCTCCTCGGTGGCTTCCTATCGCCCCATGCTGAA
CAGAGCGCCTGTGACCCCCGCGCGACGGTCCCGTAGTAGGGCAGGTTATC
GCATACCTAATCGGATCATGAGATGGCTCTGTCTCGCGCTACTGGCCTTC
CTGGTCTTGTTCATCTGCACATTGTTCCGCTTTACCTTCCTCTCAGCTGT
CACTCGCGTCAATGTTCCGTTACCCAAGCCTGCCGCAAAGCCGGCACAAT
GGGAGAGTTTCCCTTTCCTGAAACGCTACCATGGCGGTATCCGGTCCCTG
GTATCGCGAAGCGAGCAGGTGCCAGAGTACCCCAATGACAACCTGGAAGT
TTTGGGCATCGAAACCGAGAATGTTGCGAATGATACCGTCATTCAAGCCC
GGGATGAGACATTGCCATTCTCGAGCTCTATCTTCAATCCGTATCCCGAC
TACTCGTCTACGGAATATATCGAAAAGTACGGTGAGAAGCGTGATTGCTT
CCTTGATGAGGACGAGACCCTACGGATCCCTCTGGTGCATCACTATCCCG
GTGTACCTCGTGGGTTTCCAGATGCTATCATGGGCTCCAACGAGATGATC
GGTATTAAAGACGACGTTTGCTTTGACCGTTTTGGACGTCTGGGTCCTTA
CGGTCTAGGCTACAGTGTACGAAAGGGTGGTATCGGCGCGGGCCTCGAAG
GCGATCGTGAAGGCTCGGAGCGTGTCTGGGACGACGTCCCGCCAGTTGAC
TTTCGTCGAGTTGACTGGGCAGCTGCGCAGAATCGATGCTTGGCCTCGAA
CAGTCATCGGTTCCGCGATCTCCCTGCATCCCAGTCCGACCGCTTCCGTA
CTATGTCTGTGGGTGCGCCAGACACCAAACAGGCGCCTCAGGACAAGGCA
CAGTCTGATGGAAAGTCCCATCTACCTCGGACAGCGTTCGTGATCCGCAC
GTGGCATGATTTCCACTACACGCCAGACGACATTCTGTATCTGCGAGCCC
TCATCTCTGAGCTGTCACTGCTTTCCGGCGGCGAATACACCATTCATTTC
CTCGTCCAGGTCCGGGACGAAACTCTCCAGATTTGGGCTGACGACGAGGT
CTACGAGCATGTGCTGAGCGAGGCCCTGCCAGCTGAATTCCGCGGCATGG
CTACCCTCTGGTCCGAACGGCAGATGAATCTCATGTACCCTGGTCTGGAA
GAGAACTGGGCCCGCGGACTATCCGTGCATGGCGTATACCGCAGCACCTA
CATGCCCATGCAATACTTTGCGCACCAGCACCCCGGATACGACTACTACT
GGAACTGGGAGATGGACGCCCGATACACCGGCCACTGGTACCACCTCTTC
GACAAGGTCATCAACTGGGCACGAGCCCAGCCACGCAAGGGCCTCTGGGA
GCGGAACGCCCGATTCTACATCCCCTCGGTGCACGGCACCTGGGAAGACT
TCCGGCAGATGGTCCGCGTGCAGACCGACATCGGCACCAACAGCCCCAAC
AACCTCTGGAGTGCCGCCAGCGCCTCTCGACCCGGTCAAGAACACACCCC
GGAGACCCTGAAAGCGCAACAGCAACAACAAGGCGACAAGCCAATCTGGG
GCCCCGAACGACCCAACGAACCTGACATCCTGGAAGTCCCCTCGGAAGGC
ATCCCACCCACCACGATCGACAAAGACCGTTACGAATGGGGCGTCGACGA
AGAAGCCGACCTCATCGTCTTCAACCCCCTCTTCGACCCCGAAGGCACAA
CCTGGCCCCTCCGCGACGACGTCACCGGCTACGACCGCTCCACCGGCCCC
CTTCCTCCCCGCCGCGCCTCCATCATCACCGCCTCCCGTCTCTCCAATAA
ACTCCTCCAAACCATGCACCACGAAACCATCCACAAGCGCCACACCATGT
TCTCCGAAATGTGGCCCGCCACTACAGCCCTTCATCACGGATTTAAGGCC
GTCTACGTGCCCCACTCGGTGTACATTGACCGCCGCTGGCCGACTCAGTA
CCTTGAATCGGTGTTCAATGCTGGCCGGAACGGTGCGTCTGGTGGTGCCC
GCACGTCTGTCTTTGGCGATAGGGAACACAATTTCCGCGGCTCGACATGG
TTCTATTCTGCTGGCTTTGCACCGAACTTGTGGAAACGTTGGCTGGGGTA
TAAGGTTGATAATGAGGGGGGTGAGCAGGCGGAGTTGGCGGGCGAGGGGA
GAATGTGTTTGCCGCCGATGCTGTTGCATCCAGTTAAGGAGGTGGAGATG
ATTATTGACGATGGGGAGGAGAGGGGGGATGAGTGA
back to top

Coding sequence (CDS) from alignment at ch8:2572289..2574724+

>KJC3_012103-T1 ID=KJC3_012103-T1|Name=KJC3_012103-T1|organism=Aspergillus niger KJC3|type=CDS|length=2436bp|location=Sequence derived from alignment at ch8:2572289..2574724+ (Aspergillus niger KJC3)
ATGCCTGCCCGTTCGAAGAGGTATCAGGTCGATGCATCATCGCCCTATTC
GAGCGACAGCCGCGATGTCGTCGACATTGAGAAGCAACCATCGAGGCCGA
GGCGCCACTACCGTCGTGATAGCTACAGCTCGTATGATTCGGACAGTGAA
GATGACTCGGCAAGCTCCTCCTCGGTGGCTTCCTATCGCCCCATGCTGAA
CAGAGCGCCTGTGACCCCCGCGCGACGGTCCCGTAGTAGGGCAGGTTATC
GCATACCTAATCGGATCATGAGATGGCTCTGTCTCGCGCTACTGGCCTTC
CTGGTCTTGTTCATCTGCACATTGTTCCGCTTTACCTTCCTCTCAGCTGT
CACTCGCGTCAATGTTCCGTTACCCAAGCCTGCCGCAAAGCCGGCACAAT
GGGAGAGTTTCCCTTTCCTGAAACGCTACCATGGCGGTATCCGGTCCCTG
GTATCGCGAAGCGAGCAGGTGCCAGAGTACCCCAATGACAACCTGGAAGT
TTTGGGCATCGAAACCGAGAATGTTGCGAATGATACCGTCATTCAAGCCC
GGGATGAGACATTGCCATTCTCGAGCTCTATCTTCAATCCGTATCCCGAC
TACTCGTCTACGGAATATATCGAAAAGTACGGTGAGAAGCGTGATTGCTT
CCTTGATGAGGACGAGACCCTACGGATCCCTCTGGTGCATCACTATCCCG
GTGTACCTCGTGGGTTTCCAGATGCTATCATGGGCTCCAACGAGATGATC
GGTATTAAAGACGACGTTTGCTTTGACCGTTTTGGACGTCTGGGTCCTTA
CGGTCTAGGCTACAGTGTACGAAAGGGTGGTATCGGCGCGGGCCTCGAAG
GCGATCGTGAAGGCTCGGAGCGTGTCTGGGACGACGTCCCGCCAGTTGAC
TTTCGTCGAGTTGACTGGGCAGCTGCGCAGAATCGATGCTTGGCCTCGAA
CAGTCATCGGTTCCGCGATCTCCCTGCATCCCAGTCCGACCGCTTCCGTA
CTATGTCTGTGGGTGCGCCAGACACCAAACAGGCGCCTCAGGACAAGGCA
CAGTCTGATGGAAAGTCCCATCTACCTCGGACAGCGTTCGTGATCCGCAC
GTGGCATGATTTCCACTACACGCCAGACGACATTCTGTATCTGCGAGCCC
TCATCTCTGAGCTGTCACTGCTTTCCGGCGGCGAATACACCATTCATTTC
CTCGTCCAGGTCCGGGACGAAACTCTCCAGATTTGGGCTGACGACGAGGT
CTACGAGCATGTGCTGAGCGAGGCCCTGCCAGCTGAATTCCGCGGCATGG
CTACCCTCTGGTCCGAACGGCAGATGAATCTCATGTACCCTGGTCTGGAA
GAGAACTGGGCCCGCGGACTATCCGTGCATGGCGTATACCGCAGCACCTA
CATGCCCATGCAATACTTTGCGCACCAGCACCCCGGATACGACTACTACT
GGAACTGGGAGATGGACGCCCGATACACCGGCCACTGGTACCACCTCTTC
GACAAGGTCATCAACTGGGCACGAGCCCAGCCACGCAAGGGCCTCTGGGA
GCGGAACGCCCGATTCTACATCCCCTCGGTGCACGGCACCTGGGAAGACT
TCCGGCAGATGGTCCGCGTGCAGACCGACATCGGCACCAACAGCCCCAAC
AACCTCTGGAGTGCCGCCAGCGCCTCTCGACCCGGTCAAGAACACACCCC
GGAGACCCTGAAAGCGCAACAGCAACAACAAGGCGACAAGCCAATCTGGG
GCCCCGAACGACCCAACGAACCTGACATCCTGGAAGTCCCCTCGGAAGGC
ATCCCACCCACCACGATCGACAAAGACCGTTACGAATGGGGCGTCGACGA
AGAAGCCGACCTCATCGTCTTCAACCCCCTCTTCGACCCCGAAGGCACAA
CCTGGCCCCTCCGCGACGACGTCACCGGCTACGACCGCTCCACCGGCCCC
CTTCCTCCCCGCCGCGCCTCCATCATCACCGCCTCCCGTCTCTCCAATAA
ACTCCTCCAAACCATGCACCACGAAACCATCCACAAGCGCCACACCATGT
TCTCCGAAATGTGGCCCGCCACTACAGCCCTTCATCACGGATTTAAGGCC
GTCTACGTGCCCCACTCGGTGTACATTGACCGCCGCTGGCCGACTCAGTA
CCTTGAATCGGTGTTCAATGCTGGCCGGAACGGTGCGTCTGGTGGTGCCC
GCACGTCTGTCTTTGGCGATAGGGAACACAATTTCCGCGGCTCGACATGG
TTCTATTCTGCTGGCTTTGCACCGAACTTGTGGAAACGTTGGCTGGGGTA
TAAGGTTGATAATGAGGGGGGTGAGCAGGCGGAGTTGGCGGGCGAGGGGA
GAATGTGTTTGCCGCCGATGCTGTTGCATCCAGTTAAGGAGGTGGAGATG
ATTATTGACGATGGGGAGGAGAGGGGGGATGAGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012103KJC3_012103Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012103-T1.exon1KJC3_012103-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012103-T1.cdsKJC3_012103-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012103-T1KJC3_012103-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_8.5
NoteantiSMASH:Cluster_8.4
DBxrefInterPro:IPR021822
DBxrefPFAM:PF11885
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2572289..2574724 +
Powered by Drupal