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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2604261..2605307- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012113-T1 ID=KJC3_012113-T1|Name=KJC3_012113-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1047bp|location=Sequence derived from alignment at ch8:2604261..2605307- (Aspergillus niger KJC3)
ATGTCTACTCAGAAGGCCGTCATCGTTACCGAACCTAAGACTGCAGGCTT
GGTCAGCTCCCGTGCTATTCCCAAGCTCCGCGATGATTACGTCCTCGTGA
AGACTGTCAGCGTGGGGTTGAACCCCACTGACTGGAAGCATACCGACTAC
CTGTCGCCGCCCGGTGTACTGCTAGGATGTGATTACTCTGGCGTTGTTGA
GGCCGTTGGCAAGGACGTCAAGCTACCTTGGAAGAAGGGTGACCGTATCT
GTGGTTCCACCCATGGTGGTAATGCCATCGAACCCGAGGATGGCTCTTTC
GCCGAGTACATTGTTGTCAAGGGTGATGTGCAATTCCGAATCCCCGAACA
TTTGAGCTTCCAGGAAGCCGCCACGCTTGGAGTTGGTATCCAGACTGTGG
GCCAGGCTCTGTATCAGACTTTGGGACTGGCTCCACCAACGCAACCTATC
CAAAAGACGACTCCTATTCTTATATATGGCGGTTCTACGGCTACAGGTAC
CTTAGCCATCCAGTTCGCTAAGCTCTCCGGGTACCAGGTGTTCACCACCT
GCTCGCCGCACAACTTCGATCTTGTCCGTGGGCTTGGTGCGGACTTTGTC
TTCGATTATAACGACCCAGAGTCCGCCAGCCAAATTCGCAAGCAGACAAA
CAACAGCTTGACACTGGTCATGGACTGTATATCTCTTCCTTCTAGTGTTG
ATTTCAGCGACCAGGCGCTTTCAACAGAGGGTGGCGCGTACCTTTCACTC
TTGCCTGGAAAAATTGACCGTGGCAACGTCAACAATCACTCCATCCTGGT
CTACACCACCCTTGGCGAGGCCTTCAACTTCGGTGACATGTCTCTTCCCG
CTAAGCCAGAGGATTTCGAGCACGCCAAGAAGTTCACTCAGGTGGCTCAG
ACGCTTTTGGATCAGGGCAAGATCAAAGTTCATCCGCCCAAGGTTGGAAA
GGATGGTCTAAGTGGTGTCTTGGGAGGACTAGAGTTGCTCAGGACCGGCA
AAGTCAGTGGCGCAAAACTAGTCTACAACACTGGGGAGACTCCTTAG back to topCoding sequence (CDS) from alignment at ch8:2604261..2605307- >KJC3_012113-T1 ID=KJC3_012113-T1|Name=KJC3_012113-T1|organism=Aspergillus niger KJC3|type=CDS|length=1047bp|location=Sequence derived from alignment at ch8:2604261..2605307- (Aspergillus niger KJC3)
ATGTCTACTCAGAAGGCCGTCATCGTTACCGAACCTAAGACTGCAGGCTT
GGTCAGCTCCCGTGCTATTCCCAAGCTCCGCGATGATTACGTCCTCGTGA
AGACTGTCAGCGTGGGGTTGAACCCCACTGACTGGAAGCATACCGACTAC
CTGTCGCCGCCCGGTGTACTGCTAGGATGTGATTACTCTGGCGTTGTTGA
GGCCGTTGGCAAGGACGTCAAGCTACCTTGGAAGAAGGGTGACCGTATCT
GTGGTTCCACCCATGGTGGTAATGCCATCGAACCCGAGGATGGCTCTTTC
GCCGAGTACATTGTTGTCAAGGGTGATGTGCAATTCCGAATCCCCGAACA
TTTGAGCTTCCAGGAAGCCGCCACGCTTGGAGTTGGTATCCAGACTGTGG
GCCAGGCTCTGTATCAGACTTTGGGACTGGCTCCACCAACGCAACCTATC
CAAAAGACGACTCCTATTCTTATATATGGCGGTTCTACGGCTACAGGTAC
CTTAGCCATCCAGTTCGCTAAGCTCTCCGGGTACCAGGTGTTCACCACCT
GCTCGCCGCACAACTTCGATCTTGTCCGTGGGCTTGGTGCGGACTTTGTC
TTCGATTATAACGACCCAGAGTCCGCCAGCCAAATTCGCAAGCAGACAAA
CAACAGCTTGACACTGGTCATGGACTGTATATCTCTTCCTTCTAGTGTTG
ATTTCAGCGACCAGGCGCTTTCAACAGAGGGTGGCGCGTACCTTTCACTC
TTGCCTGGAAAAATTGACCGTGGCAACGTCAACAATCACTCCATCCTGGT
CTACACCACCCTTGGCGAGGCCTTCAACTTCGGTGACATGTCTCTTCCCG
CTAAGCCAGAGGATTTCGAGCACGCCAAGAAGTTCACTCAGGTGGCTCAG
ACGCTTTTGGATCAGGGCAAGATCAAAGTTCATCCGCCCAAGGTTGGAAA
GGATGGTCTAAGTGGTGTCTTGGGAGGACTAGAGTTGCTCAGGACCGGCA
AAGTCAGTGGCGCAAAACTAGTCTACAACACTGGGGAGACTCCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.5 |
| Note | antiSMASH:Cluster_8.4 |
| Note | SMCOG1028:crotonyl-CoA reductase / alcohol dehydrogenase |
| DBxref | InterPro:IPR011032 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR013154 |
| DBxref | InterPro:IPR013149 |
| DBxref | InterPro:IPR020843 |
| DBxref | PFAM:PF00107 |
| DBxref | PFAM:PF08240 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2604261..2605307 - |
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