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KJC3_012116-T1, KJC3_012116-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012116-T1
Unique NameKJC3_012116-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2609852..2611525-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012116-T1 ID=KJC3_012116-T1|Name=KJC3_012116-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1674bp|location=Sequence derived from alignment at ch8:2609852..2611525- (Aspergillus niger KJC3)
ATGTCTATCCTGTCGATGGTCGAGGACCGGCCCACGCCCAAGGAGGTCTA
CAACTGGCGTATCTACCTCCTGGCGGCCGTTGCCTCCTTCACCTCTTGTA
TGATCGGCTACGACAGTGCTTTCATCGGCACGACTATCTCCCTCGACTCC
TTCAAGAATGAGTTCCACTGGGACTCCATGTCCACCGCGAAACAGAACCT
CGTCAGTGCCAACATCGTCTCCTGCTACCAGGCAGGCGCCTTCTTTGGCG
CCTTCTTCGCCTATCCCATCGGCCACTTCTGGGGCCGTAAGTGGGGTCTC
ATGCTGTCAGCTCTGGTCTTCACTCTGGGGGCGGGCCTGATGCTGGGTGC
CAACGGCGACCGCGGTCTGGGATTGATCTACGGCGGTCGTGTGCTGGCTG
GCCTGGGAGTCGGCGCTGGCTCCAACTTCACCCCCATCTACATCTCCGAA
CTGGCCCCGCCTGCCATTCGAGGCCGGCTGGTCGGTGTTTACGAGCTAGG
ATGGCAGGTCGGCGGTCTCGTGGGCTTCTGGATCAACGTAAGTCTCCCCT
ACGGCATAATTACAATCTACGATCATAGCTGACTCGAGCAGTACGGAGTG
GAGCAAACCATGGCTCCCAGCCACAAGCAGTGGCTGATCCCCTTTGCCGT
CCAGCTGATCCCAGCGGGCCTGCTGATCATCGGCATTCTCTTCGTCAAGG
AGTCCCCTCGTTGGCTGTTCCTGCGTGGCCGCCGCGAGGAGGCCATCAAG
AACCTCTGCTGGATCCGCCAGATCCCTGCCGACCATATCTACATGATCGA
GGAGATCGGGGCCATCGACCAGACGCTGGAGCACCAGCGCTCCACGATCG
GGCTCGGCTTCTGGAGGCCCCTCAAGGAGGCCTGGACGAACAAGCGCATC
CTGTACCGGCTGTTCCTCGGTAGCATGCTCTTCTTCTGGCAGAACGGGTC
CGGCATCAACGCCATCAACTACTACAGCCCGACCGTGTTCAAGAGCATTG
GTCTGAAAGGCAACAGCTCCAGCCTTCTGACCACCGGCATCTTCGGTGTG
GTCAAGACCGTAGTAACGATCATCTGGCTGCTGTACCTCATCGACCACGT
TGGCCGCCGACTGCTGCTGCTGATCGGAGCCGCCGGTGGATCCATCTGCA
TGTGGATCGTGGGTGCATACATCAAAGTCGTGGACCCGACCCACAACCAG
AGCGACCACCTCAACGGGGGCGGCGTCGCCGCCATCTTCTTCTTCTACCT
GTGGACGGCGTTCTACACGCCCTCCTGGAACGGTACCCCCTGGGTCATCA
ACTCGGAGATGTTCGACCCCAACATTCGGTCTCTGGCCCAGGCGTGCGCC
GCCGGGTCCAACTGGCTCTGGAACTTCCTCATCTCGCGCTTCACGCCGCA
GATGTTCGCCAAGATGGACTATGGTGTGTACTTCTTCTTCGCCAGTCTGA
TGCTCTTGTCGATCCCCTTCGTGTTCTTCCTAGTTCCGGAGACCAAGGGT
ATCCCGCTGGAGAACATGGATCCGCTTTTCCAGACGCAGCCCGTGTGGCG
CGCTCACGCAAAGGTGTTGGCGCAGATCCACGAGGACGAGGCGAGGTTCC
GTCGTGACCTCGAGGAGTCAGGCTACACTAAGGGGAATGTTGTGCAGGTG
GAGGATACCGACCGGAAGGAATGA
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Coding sequence (CDS) from alignment at ch8:2609852..2611525-

>KJC3_012116-T1 ID=KJC3_012116-T1|Name=KJC3_012116-T1|organism=Aspergillus niger KJC3|type=CDS|length=3240bp|location=Sequence derived from alignment at ch8:2609852..2611525- (Aspergillus niger KJC3)
TACGGAGTGGAGCAAACCATGGCTCCCAGCCACAAGCAGTGGCTGATCCC
CTTTGCCGTCCAGCTGATCCCAGCGGGCCTGCTGATCATCGGCATTCTCT
TCGTCAAGGAGTCCCCTCGTTGGCTGTTCCTGCGTGGCCGCCGCGAGGAG
GCCATCAAGAACCTCTGCTGGATCCGCCAGATCCCTGCCGACCATATCTA
CATGATCGAGGAGATCGGGGCCATCGACCAGACGCTGGAGCACCAGCGCT
CCACGATCGGGCTCGGCTTCTGGAGGCCCCTCAAGGAGGCCTGGACGAAC
AAGCGCATCCTGTACCGGCTGTTCCTCGGTAGCATGCTCTTCTTCTGGCA
GAACGGGTCCGGCATCAACGCCATCAACTACTACAGCCCGACCGTGTTCA
AGAGCATTGGTCTGAAAGGCAACAGCTCCAGCCTTCTGACCACCGGCATC
TTCGGTGTGGTCAAGACCGTAGTAACGATCATCTGGCTGCTGTACCTCAT
CGACCACGTTGGCCGCCGACTGCTGCTGCTGATCGGAGCCGCCGGTGGAT
CCATCTGCATGTGGATCGTGGGTGCATACATCAAAGTCGTGGACCCGACC
CACAACCAGAGCGACCACCTCAACGGGGGCGGCGTCGCCGCCATCTTCTT
CTTCTACCTGTGGACGGCGTTCTACACGCCCTCCTGGAACGGTACCCCCT
GGGTCATCAACTCGGAGATGTTCGACCCCAACATTCGGTCTCTGGCCCAG
GCGTGCGCCGCCGGGTCCAACTGGCTCTGGAACTTCCTCATCTCGCGCTT
CACGCCGCAGATGTTCGCCAAGATGGACTATGGTGTGTACTTCTTCTTCG
CCAGTCTGATGCTCTTGTCGATCCCCTTCGTGTTCTTCCTAGTTCCGGAG
ACCAAGGGTATCCCGCTGGAGAACATGGATCCGCTTTTCCAGACGCAGCC
CGTGTGGCGCGCTCACGCAAAGGTGTTGGCGCAGATCCACGAGGACGAGG
CGAGGTTCCGTCGTGACCTCGAGGAGTCAGGCTACACTAAGGGGAATGTT
GTGCAGGTGGAGGATACCGACCGGAAGGAATGAATGTCTATCCTGTCGAT
GGTCGAGGACCGGCCCACGCCCAAGGAGGTCTACAACTGGCGTATCTACC
TCCTGGCGGCCGTTGCCTCCTTCACCTCTTGTATGATCGGCTACGACAGT
GCTTTCATCGGCACGACTATCTCCCTCGACTCCTTCAAGAATGAGTTCCA
CTGGGACTCCATGTCCACCGCGAAACAGAACCTCGTCAGTGCCAACATCG
TCTCCTGCTACCAGGCAGGCGCCTTCTTTGGCGCCTTCTTCGCCTATCCC
ATCGGCCACTTCTGGGGCCGTAAGTGGGGTCTCATGCTGTCAGCTCTGGT
CTTCACTCTGGGGGCGGGCCTGATGCTGGGTGCCAACGGCGACCGCGGTC
TGGGATTGATCTACGGCGGTCGTGTGCTGGCTGGCCTGGGAGTCGGCGCT
GGCTCCAACTTCACCCCCATCTACATCTCCGAACTGGCCCCGCCTGCCAT
TCGAGGCCGGCTGGTCGGTGTTTACGAGCTAGGATGGCAGGTCGGCGGTC
TCGTGGGCTTCTGGATCAACTACGGAGTGGAGCAAACCATGGCTCCCAGC
CACAAGCAGTGGCTGATCCCCTTTGCCGTCCAGCTGATCCCAGCGGGCCT
GCTGATCATCGGCATTCTCTTCGTCAAGGAGTCCCCTCGTTGGCTGTTCC
TGCGTGGCCGCCGCGAGGAGGCCATCAAGAACCTCTGCTGGATCCGCCAG
ATCCCTGCCGACCATATCTACATGATCGAGGAGATCGGGGCCATCGACCA
GACGCTGGAGCACCAGCGCTCCACGATCGGGCTCGGCTTCTGGAGGCCCC
TCAAGGAGGCCTGGACGAACAAGCGCATCCTGTACCGGCTGTTCCTCGGT
AGCATGCTCTTCTTCTGGCAGAACGGGTCCGGCATCAACGCCATCAACTA
CTACAGCCCGACCGTGTTCAAGAGCATTGGTCTGAAAGGCAACAGCTCCA
GCCTTCTGACCACCGGCATCTTCGGTGTGGTCAAGACCGTAGTAACGATC
ATCTGGCTGCTGTACCTCATCGACCACGTTGGCCGCCGACTGCTGCTGCT
GATCGGAGCCGCCGGTGGATCCATCTGCATGTGGATCGTGGGTGCATACA
TCAAAGTCGTGGACCCGACCCACAACCAGAGCGACCACCTCAACGGGGGC
GGCGTCGCCGCCATCTTCTTCTTCTACCTGTGGACGGCGTTCTACACGCC
CTCCTGGAACGGTACCCCCTGGGTCATCAACTCGGAGATGTTCGACCCCA
ACATTCGGTCTCTGGCCCAGGCGTGCGCCGCCGGGTCCAACTGGCTCTGG
AACTTCCTCATCTCGCGCTTCACGCCGCAGATGTTCGCCAAGATGGACTA
TGGTGTGTACTTCTTCTTCGCCAGTCTGATGCTCTTGTCGATCCCCTTCG
TGTTCTTCCTAGTTCCGGAGACCAAGGGTATCCCGCTGGAGAACATGGAT
CCGCTTTTCCAGACGCAGCCCGTGTGGCGCGCTCACGCAAAGGTGTTGGC
GCAGATCCACGAGGACGAGGCGAGGTTCCGTCGTGACCTCGAGGAGTCAG
GCTACACTAAGGGGAATGTTGTGCAGGTGGAGGATACCGACCGGAAGGAA
TGAATGTCTATCCTGTCGATGGTCGAGGACCGGCCCACGCCCAAGGAGGT
CTACAACTGGCGTATCTACCTCCTGGCGGCCGTTGCCTCCTTCACCTCTT
GTATGATCGGCTACGACAGTGCTTTCATCGGCACGACTATCTCCCTCGAC
TCCTTCAAGAATGAGTTCCACTGGGACTCCATGTCCACCGCGAAACAGAA
CCTCGTCAGTGCCAACATCGTCTCCTGCTACCAGGCAGGCGCCTTCTTTG
GCGCCTTCTTCGCCTATCCCATCGGCCACTTCTGGGGCCGTAAGTGGGGT
CTCATGCTGTCAGCTCTGGTCTTCACTCTGGGGGCGGGCCTGATGCTGGG
TGCCAACGGCGACCGCGGTCTGGGATTGATCTACGGCGGTCGTGTGCTGG
CTGGCCTGGGAGTCGGCGCTGGCTCCAACTTCACCCCCATCTACATCTCC
GAACTGGCCCCGCCTGCCATTCGAGGCCGGCTGGTCGGTGTTTACGAGCT
AGGATGGCAGGTCGGCGGTCTCGTGGGCTTCTGGATCAAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012116KJC3_012116Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012116-T1KJC3_012116-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012116-T1.cdsKJC3_012116-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012116-T1.exon2KJC3_012116-T1.exon2Aspergillus niger KJC3exon
KJC3_012116-T1.exon1KJC3_012116-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteantiSMASH:Cluster_8.5
NoteantiSMASH:Cluster_8.4
NoteSMCOG1169:sugar transport protein
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2609852..2611525 -
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