You are here

Home

KJC3_012117-T1, KJC3_012117-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012117-T1
Unique NameKJC3_012117-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2612736..2613331+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012117-T1 ID=KJC3_012117-T1|Name=KJC3_012117-T1|organism=Aspergillus niger KJC3|type=mRNA|length=596bp|location=Sequence derived from alignment at ch8:2612736..2613331+ (Aspergillus niger KJC3)
CCCATACTCATACTACCACCACTTCTACACATACTTCCTCCTTCTACCAC
CAACTACAACACTTGAACCAACATACTCCTCCCTCCATCTCCCAAAAGAA
CTCAAACACCACAATGGAATTGCAAACCCCCACCCCCAAATCCATCCTCC
TCATCAACGGCCCCAACCTCAACCTCCTGGGCACCCGCGAACCCCACATC
TACGGCAGCACGACGCTCTCCCAAGTCGAATCGTCATGCGCCGACCTCGC
CACCTCTCTCTCCTGCACATTTGACTCCTTCCAATCGAACCACGAGGGCG
CCATCGTCGACCGCATCCACGCCGCGCGGGGCTCCGTCGACGCAATCATC
ATCAACCCGGGCGCGTACACACACACATCCGTCGCGATCCGGGATGCGTT
GCTGGGGGTTGCGATCCCGTTCATCGAGCTGCATGTGAGTAACGTGCATG
CGCGGGAGGAGTGGAGACACAAGAGTTATTTCAGTGACAAGGCAAGTGGG
ATTATTGTGGGATTGGGCGTGCAGGGGTATAGGGTTGCGGTTGAGTATGT
GGCGAGGAATTGGGCGCCGTTGAAAAAGGAGGGGGTGAAGTTGTGA
back to top

Coding sequence (CDS) from alignment at ch8:2612736..2613331+

>KJC3_012117-T1 ID=KJC3_012117-T1|Name=KJC3_012117-T1|organism=Aspergillus niger KJC3|type=CDS|length=483bp|location=Sequence derived from alignment at ch8:2612736..2613331+ (Aspergillus niger KJC3)
ATGGAATTGCAAACCCCCACCCCCAAATCCATCCTCCTCATCAACGGCCC
CAACCTCAACCTCCTGGGCACCCGCGAACCCCACATCTACGGCAGCACGA
CGCTCTCCCAAGTCGAATCGTCATGCGCCGACCTCGCCACCTCTCTCTCC
TGCACATTTGACTCCTTCCAATCGAACCACGAGGGCGCCATCGTCGACCG
CATCCACGCCGCGCGGGGCTCCGTCGACGCAATCATCATCAACCCGGGCG
CGTACACACACACATCCGTCGCGATCCGGGATGCGTTGCTGGGGGTTGCG
ATCCCGTTCATCGAGCTGCATGTGAGTAACGTGCATGCGCGGGAGGAGTG
GAGACACAAGAGTTATTTCAGTGACAAGGCAAGTGGGATTATTGTGGGAT
TGGGCGTGCAGGGGTATAGGGTTGCGGTTGAGTATGTGGCGAGGAATTGG
GCGCCGTTGAAAAAGGAGGGGGTGAAGTTGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:00038553-dehydroquinate dehydratase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012117KJC3_012117Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012117-T1.utr5p1KJC3_012117-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012117-T1.exon1KJC3_012117-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012117-T1.cdsKJC3_012117-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012117-T1KJC3_012117-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_8.5
NoteantiSMASH:Cluster_8.4
DBxrefInterPro:IPR018509
DBxrefInterPro:IPR036441
DBxrefInterPro:IPR001874
DBxrefPFAM:PF01220
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2612736..2613331 +
Powered by Drupal