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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2617955..2621620+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012119-T1 ID=KJC3_012119-T1|Name=KJC3_012119-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3666bp|location=Sequence derived from alignment at ch8:2617955..2621620+ (Aspergillus niger KJC3)
CGATTCTACCTACTAACTAATTATTCTCCATCTCCACCTTCTCGTCAAAC
ACGCCAGTCCCTCCCTGCAGCCACTCCAGGTTGGTTCGTCCCTTCTTGTC
CCTTCCCATCCCACACCCCCCCCTCCCCCTACCCTATCCTACACTATCTT
ACCTCCCCTAGCTCATCTCTCCCCACACTCTTGGGTCTTGAGTATTCGTT
TCCCGCCTTCTTTTTCTTATTATTGTTATTATTACGTCGCTCACACAAGT
AGCTGGATTGCTCCTCCGCAGGCTCACCGTGATCGTGTCAAACCCAATGC
TTACCTTCGAATGCGTCGGTCGGTCCCGCAGCAACTAATTCTCGGCTCTC
GCGTCCTACGCCATGCGTGGGTCTAATAATCGCCCTCTTCTCAGTATTGT
GATTTCTCGTGTATAGCCAGAACAAAAATTCCCTGTGCACGACATGTCAA
TCCTCGTGAATCCTCCCAAACGCAAGCTAGACGAGCTGGAAGGTCCGGTC
GAGCATCAGAGCAGCAGGCGCTTGTCGCATCTCCCTTTCACCTCGAATAC
CCCCCATGCAGTAGATCCGACTCCCGGCAACGATGTGCCTCCCCGTCCCC
GTGTCAATTCCGCTCCTCAGACGGAACACTCAGAGGCGTCGCCTTGGTTG
AATGCTTCCTTGCGCGAGTTGAGCTCCAATCGTCAGTCGCCAGTTTCTTT
TGACGGGCCTTTCCAGGCTCAGAGGAAATTCGCTCCCAATGCGTCCATTG
TGTTGACCGGAATCCGCGGCACGGGAAAGTCCAGTCTAGCAGTCATTCTG
GCGGCGACCTCGGGTAGGCGACTGATCGATGCAGACCGGTATTTTCAGCA
GGTGACCGGTCGTACACGCGCTTCCTACAAGAAAGAGTTCGATCTGGTGG
AGTATCGTCAGCAGGAAGCCAGGGTGATGGAGTCCATGCTCTCCGAAAAC
CAAGAAGGCTGCGTCATCGCGTGCGGGCCTGGTTCCATGGAGCGCAGTGG
GCAGACGCTGCTGAGGGAGTACGCGAAAACCCATCCAGTCATCTACATCC
TCCGAGACCCCGAGAGCATCCAGTCTTACCTGAAAGCGTGGAACACAGAC
AAGGTTCGTCGTTTTCTGGAACTCTCGGGGCCCATCTATCGCGCCTGTTC
CAACCTCGAATTCTTCAATGTCTCCGAGAAGGGCCTTGCGGACCATCCGA
TTCCAAAAGACGGTCACCATGACTCGCAATTAGAATCGGAGCTTGATCAA
CGAGTCCAAGCAATCACTCCTTTCCTTACCCTCAAACAATTACAGCGGGA
TTTTCTGTGTTTCATTGCGTTCGCAACGGGCGACACCACAGACCTCAGCC
GCCATAACTCATCCTTCCCTCTGTCGATGCAACCAGTTGAATCGCGCACC
TATACTTATGCCGTAACCGTCCCTATCTCGTCCATGTTAGAACGTGATCT
GGATATCGAGGAGCTAGAGTCGACCTCCGATGCGTTTGAGCTGAAGCTGG
ATGTGGCCGAGCCACCTTCCTCCCATCTCGGTTTGGACTCGAGCTTTGCC
GATACCATTAGTCGGGCGTTCGCCAATGTCCGACGGAACACGGTCGTTCC
ATTAATATACCATGTGGAGAGTAATGTATGTCGTTATGGCTTGAGCGCAG
AACATAAGGATCCCTCGCGGCGGTCGGATCCTGAGTATCTCAAATTAGTC
CAGCACGGCCTACGATTAGCCCCGGAGTTTGTGACAGTAGATATGTCCTA
CGACGACAAGGTACTTTCACAGGTCATAGCTTATAAAGGGTCCAGCAAAG
TGATCGGGCACTTTGCTGCTACGCAGCCACCGGCGCGGGGCTGGGATGAT
GCACAGTATGTCGAGCTCTACGAGCGAGCCAAAAGGTTAGGATGCGACAT
GGTTCGGTTGACACAGCCGGCGGTGACAATTGATGACAATTTTGCCGTGC
AACGCTTTCGCGACCATATCAAGTCCCTTCCTACCCCGCAACTGCCTGTC
ATCGCGTACAATGCGGGCCCATTGGGCCGGTTGTCATGCTGTTTCAACCC
GATCTTGACCCCTGTCACCCATCCGTCAATGGTCGCCGAGATGCAATCCA
AAGGGTTGCCGTGTATCACCCTGCGTGAGGCACAGGAGGCTCTGTACGCC
TCGTTCACATTGGACCCCTTACACTTCTTTGTTTTCGGCGCCAACATCAC
CTACAGTCTGTCTCCTGCCATGCATAATGCCGCCTATAAGCGATGCGGAA
TGCCGCACCATTACAAGCTCCACCAGTCGTCGACTCTGCGAGGCCTCAAT
GAGTTGGTGGAGAATCCGCATTTTGGTGGCACCAGTGTCAGCCTGCCGTT
CAAAACCGAAGCCATTCCGCTACTGCATTCCATGTCTCCCCATGCTCGAG
CCATTGGCGCCGTGAACACGCTAATTCCTATTCGGAGGCTGGGAGACAAA
GCCCTCGACGCCGATAATTCCTCGTTGTACATGGAGAAGAGTCGCGCAGG
GCCGATCAAGGCCTTGCACGGAGACAATACCGACTGGATCGGAATTGGAA
ATTGTTTCCGAAGAGGCCTGTCACCCGCGAATGCCATCCGCCCCTCGTCC
ACTGGGCTAGTCATTGGCGCGGGTGGCATGGCGCGCGCTGCCATCTACTC
CATGATCCACCTGGGCGTGCAGAATATCTTCGTCTACAACCGGACCCTAG
CGAATGCTGAAAAACTCGCCTACCATTATAATCGCCAGAATCTCCCTTCC
CCGGGCCAGGCCGGGTCGGCGGCACGGCCTCAGGTGCACGTGCTGCAAAG
CCTACAGGACAGCTGGCCTGCCAATTACAAGCAGCCGACCGTCGTCTGTT
CATGTATCCCAACTCATAGCATCGGAGGGCAGCCGGCCCCGAACTTCGAA
ATGCCAGTGCAGTGGCTCGAAAGCCCGACGGGAGGCGTTGTCGTGGAGGT
TCGTCAAATACCACTGTAGTTACACCCTGTAATCTGAACGACACTAACCA
GTACACAGTTGGCGTATAAAACGCTCAATACCCCATTGATGAAACAAATC
CGAGCACTTTCGCACCGTGGCTGGGTCGCTCTGGACGGACTAGATGTCCT
CCCGGAGCAAGGTTTCGCCCAGTTCGAGCTGTTCACAGGTCGCCGGGCGC
CGCGACGGCTCATGCGGACCGTAGTCTTGAAGGAATACGAGGGCGAAGAA
GGTCAATACGACGAGCAGGCAATCCAAAGCAGGATTGAGAGTCTAGATGG
ACAACCGACCTGAAATGCTCATTGGCCAAGAATATGCCATTAAAGCCTCA
GCTGTCTAATGTCGCATTAAAAATAAATGAAAAGGGCCACCATTGGCTGC
CCTGTCCGTCATCGGCATGACCGTACCTGGGATGGTCAGTCAGTCAGCAT
GCAGCCACTTCCGCGGGACTTTTTTTTTCCCCTTTGGCAGGTGGCATGTG
GGCGAGCAATGCTTGCTGATTATGAGCACGCACACATACACACACACCAG
GCATGGACGCCAGTCGCCCCGGACAATGCAGCAAACGCAGCATTTCGATC
TAAATACTGCCACTGCTCGTGATATGATATTTCTGTGATGACTACTACGT
ACGTATTGAAGAGGACACGACTATCGTTCCATATACAATCCATGACAACA
TAATCCAACGATGAAT back to topCoding sequence (CDS) from alignment at ch8:2617955..2621620+ >KJC3_012119-T1 ID=KJC3_012119-T1|Name=KJC3_012119-T1|organism=Aspergillus niger KJC3|type=CDS|length=5520bp|location=Sequence derived from alignment at ch8:2617955..2621620+ (Aspergillus niger KJC3)
ATGTCAATCCTCGTGAATCCTCCCAAACGCAAGCTAGACGAGCTGGAAGG
TCCGGTCGAGCATCAGAGCAGCAGGCGCTTGTCGCATCTCCCTTTCACCT
CGAATACCCCCCATGCAGTAGATCCGACTCCCGGCAACGATGTGCCTCCC
CGTCCCCGTGTCAATTCCGCTCCTCAGACGGAACACTCAGAGGCGTCGCC
TTGGTTGAATGCTTCCTTGCGCGAGTTGAGCTCCAATCGTCAGTCGCCAG
TTTCTTTTGACGGGCCTTTCCAGGCTCAGAGGAAATTCGCTCCCAATGCG
TCCATTGTGTTGACCGGAATCCGCGGCACGGGAAAGTCCAGTCTAGCAGT
CATTCTGGCGGCGACCTCGGGTAGGCGACTGATCGATGCAGACCGGTATT
TTCAGCAGGTGACCGGTCGTACACGCGCTTCCTACAAGAAAGAGTTCGAT
CTGGTGGAGTATCGTCAGCAGGAAGCCAGGGTGATGGAGTCCATGCTCTC
CGAAAACCAAGAAGGCTGCGTCATCGCGTGCGGGCCTGGTTCCATGGAGC
GCAGTGGGCAGACGCTGCTGAGGGAGTACGCGAAAACCCATCCAGTCATC
TACATCCTCCGAGACCCCGAGAGCATCCAGTCTTACCTGAAAGCGTGGAA
CACAGACAAGGTTCGTCGTTTTCTGGAACTCTCGGGGCCCATCTATCGCG
CCTGTTCCAACCTCGAATTCTTCAATGTCTCCGAGAAGGGCCTTGCGGAC
CATCCGATTCCAAAAGACGGTCACCATGACTCGCAATTAGAATCGGAGCT
TGATCAACGAGTCCAAGCAATCACTCCTTTCCTTACCCTCAAACAATTAC
AGCGGGATTTTCTGTGTTTCATTGCGTTCGCAACGGGCGACACCACAGAC
CTCAGCCGCCATAACTCATCCTTCCCTCTGTCGATGCAACCAGTTGAATC
GCGCACCTATACTTATGCCGTAACCGTCCCTATCTCGTCCATGTTAGAAC
GTGATCTGGATATCGAGGAGCTAGAGTCGACCTCCGATGCGTTTGAGCTG
AAGCTGGATGTGGCCGAGCCACCTTCCTCCCATCTCGGTTTGGACTCGAG
CTTTGCCGATACCATTAGTCGGGCGTTCGCCAATGTCCGACGGAACACGG
TCGTTCCATTAATATACCATGTGGAGAGTAATGTATGTCGTTATGGCTTG
AGCGCAGAACATAAGGATCCCTCGCGGCGGTCGGATCCTGAGTATCTCAA
ATTAGTCCAGCACGGCCTACGATTAGCCCCGGAGTTTGTGACAGTAGATA
TGTCCTACGACGACAAGGTACTTTCACAGGTCATAGCTTATAAAGGGTCC
AGCAAAGTGATCGGGCACTTTGCTGCTACGCAGCCACCGGCGCGGGGCTG
GGATGATGCACAGTATGTCGAGCTCTACGAGCGAGCCAAAAGGTTAGGAT
GCGACATGGTTCGGTTGACACAGCCGGCGGTGACAATTGATGACAATTTT
GCCGTGCAACGCTTTCGCGACCATATCAAGTCCCTTCCTACCCCGCAACT
GCCTGTCATCGCGTACAATGCGGGCCCATTGGGCCGGTTGTCATGCTGTT
TCAACCCGATCTTGACCCCTGTCACCCATCCGTCAATGGTCGCCGAGATG
CAATCCAAAGGGTTGCCGTGTATCACCCTGCGTGAGGCACAGGAGGCTCT
GTACGCCTCGTTCACATTGGACCCCTTACACTTCTTTGTTTTCGGCGCCA
ACATCACCTACAGTCTGTCTCCTGCCATGCATAATGCCGCCTATAAGCGA
TGCGGAATGCCGCACCATTACAAGCTCCACCAGTCGTCGACTCTGCGAGG
CCTCAATGAGTTGGTGGAGAATCCGCATTTTGGTGGCACCAGTGTCAGCC
TGCCGTTCAAAACCGAAGCCATTCCGCTACTGCATTCCATGTCTCCCCAT
GCTCGAGCCATTGGCGCCGTGAACACGCTAATTCCTATTCGGAGGCTGGG
AGACAAAGCCCTCGACGCCGATAATTCCTCGTTGTACATGGAGAAGAGTC
GCGCAGGGCCGATCAAGGCCTTGCACGGAGACAATACCGACTGGATCGGA
ATTGGAAATTGTTTCCGAAGAGGCCTGTCACCCGCGAATGCCATCCGCCC
CTCGTCCACTGGGCTAGTCATTGGCGCGGGTGGCATGGCGCGCGCTGCCA
TCTACTCCATGATCCACCTGGGCGTGCAGAATATCTTCGTCTACAACCGG
ACCCTAGCGAATGCTGAAAAACTCGCCTACCATTATAATCGCCAGAATCT
CCCTTCCCCGGGCCAGGCCGGGTCGGCGGCACGGCCTCAGGTGCACGTGC
TGCAAAGCCTACAGGACAGCTGGCCTGCCAATTACAAGCAGCCGACCGTC
GTCTGTTCATGTATCCCAACTCATAGCATCGGAGGGCAGCCGGCCCCGAA
CTTCGAAATGCCAGTGCAGTGGCTCGAAAGCCCGACGGGAGGCGTTGTCG
TGGAGTTGGCGTATAAAACGCTCAATACCCCATTGATGAAACAAATCCGA
GCACTTTCGCACCGTGGCTGGGTCGCTCTGGACGGACTAGATGTCCTCCC
GGAGCAAGGTTTCGCCCAGTTCGAGCTGTTCACAGGTCGCCGGGCGCCGC
GACGGCTCATGCGGACCGTAGTCTTGAAGGAATACGAGGGCGAAGAAGGT
CAATACGACGAGCAGGCAATCCAAAGCAGGATTGAGAGTCTAGATGGACA
ACCGACCTGAATGTCAATCCTCGTGAATCCTCCCAAACGCAAGCTAGACG
AGCTGGAAGGTCCGGTCGAGCATCAGAGCAGCAGGCGCTTGTCGCATCTC
CCTTTCACCTCGAATACCCCCCATGCAGTAGATCCGACTCCCGGCAACGA
TGTGCCTCCCCGTCCCCGTGTCAATTCCGCTCCTCAGACGGAACACTCAG
AGGCGTCGCCTTGGTTGAATGCTTCCTTGCGCGAGTTGAGCTCCAATCGT
CAGTCGCCAGTTTCTTTTGACGGGCCTTTCCAGGCTCAGAGGAAATTCGC
TCCCAATGCGTCCATTGTGTTGACCGGAATCCGCGGCACGGGAAAGTCCA
GTCTAGCAGTCATTCTGGCGGCGACCTCGGGTAGGCGACTGATCGATGCA
GACCGGTATTTTCAGCAGGTGACCGGTCGTACACGCGCTTCCTACAAGAA
AGAGTTCGATCTGGTGGAGTATCGTCAGCAGGAAGCCAGGGTGATGGAGT
CCATGCTCTCCGAAAACCAAGAAGGCTGCGTCATCGCGTGCGGGCCTGGT
TCCATGGAGCGCAGTGGGCAGACGCTGCTGAGGGAGTACGCGAAAACCCA
TCCAGTCATCTACATCCTCCGAGACCCCGAGAGCATCCAGTCTTACCTGA
AAGCGTGGAACACAGACAAGGTTCGTCGTTTTCTGGAACTCTCGGGGCCC
ATCTATCGCGCCTGTTCCAACCTCGAATTCTTCAATGTCTCCGAGAAGGG
CCTTGCGGACCATCCGATTCCAAAAGACGGTCACCATGACTCGCAATTAG
AATCGGAGCTTGATCAACGAGTCCAAGCAATCACTCCTTTCCTTACCCTC
AAACAATTACAGCGGGATTTTCTGTGTTTCATTGCGTTCGCAACGGGCGA
CACCACAGACCTCAGCCGCCATAACTCATCCTTCCCTCTGTCGATGCAAC
CAGTTGAATCGCGCACCTATACTTATGCCGTAACCGTCCCTATCTCGTCC
ATGTTAGAACGTGATCTGGATATCGAGGAGCTAGAGTCGACCTCCGATGC
GTTTGAGCTGAAGCTGGATGTGGCCGAGCCACCTTCCTCCCATCTCGGTT
TGGACTCGAGCTTTGCCGATACCATTAGTCGGGCGTTCGCCAATGTCCGA
CGGAACACGGTCGTTCCATTAATATACCATGTGGAGAGTAATGTATGTCG
TTATGGCTTGAGCGCAGAACATAAGGATCCCTCGCGGCGGTCGGATCCTG
AGTATCTCAAATTAGTCCAGCACGGCCTACGATTAGCCCCGGAGTTTGTG
ACAGTAGATATGTCCTACGACGACAAGGTACTTTCACAGGTCATAGCTTA
TAAAGGGTCCAGCAAAGTGATCGGGCACTTTGCTGCTACGCAGCCACCGG
CGCGGGGCTGGGATGATGCACAGTATGTCGAGCTCTACGAGCGAGCCAAA
AGGTTAGGATGCGACATGGTTCGGTTGACACAGCCGGCGGTGACAATTGA
TGACAATTTTGCCGTGCAACGCTTTCGCGACCATATCAAGTCCCTTCCTA
CCCCGCAACTGCCTGTCATCGCGTACAATGCGGGCCCATTGGGCCGGTTG
TCATGCTGTTTCAACCCGATCTTGACCCCTGTCACCCATCCGTCAATGGT
CGCCGAGATGCAATCCAAAGGGTTGCCGTGTATCACCCTGCGTGAGGCAC
AGGAGGCTCTGTACGCCTCGTTCACATTGGACCCCTTACACTTCTTTGTT
TTCGGCGCCAACATCACCTACAGTCTGTCTCCTGCCATGCATAATGCCGC
CTATAAGCGATGCGGAATGCCGCACCATTACAAGCTCCACCAGTCGTCGA
CTCTGCGAGGCCTCAATGAGTTGGTGGAGAATCCGCATTTTGGTGGCACC
AGTGTCAGCCTGCCGTTCAAAACCGAAGCCATTCCGCTACTGCATTCCAT
GTCTCCCCATGCTCGAGCCATTGGCGCCGTGAACACGCTAATTCCTATTC
GGAGGCTGGGAGACAAAGCCCTCGACGCCGATAATTCCTCGTTGTACATG
GAGAAGAGTCGCGCAGGGCCGATCAAGGCCTTGCACGGAGACAATACCGA
CTGGATCGGAATTGGAAATTGTTTCCGAAGAGGCCTGTCACCCGCGAATG
CCATCCGCCCCTCGTCCACTGGGCTAGTCATTGGCGCGGGTGGCATGGCG
CGCGCTGCCATCTACTCCATGATCCACCTGGGCGTGCAGAATATCTTCGT
CTACAACCGGACCCTAGCGAATGCTGAAAAACTCGCCTACCATTATAATC
GCCAGAATCTCCCTTCCCCGGGCCAGGCCGGGTCGGCGGCACGGCCTCAG
GTGCACGTGCTGCAAAGCCTACAGGACAGCTGGCCTGCCAATTACAAGCA
GCCGACCGTCGTCTGTTCATGTATCCCAACTCATAGCATCGGAGGGCAGC
CGGCCCCGAACTTCGAAATGCCAGTGCAGTGGCTCGAAAGCCCGACGGGA
GGCGTTGTCGTGGAGTTGGCGTATAAAACGCTCAATACCCCATTGATGAA
ACAAATCCGAGCACTTTCGCACCGTGGCTGGGTCGCTCTGGACGGACTAG
ATGTCCTCCCGGAGCAAGGTTTCGCCCAGTTCGAGCTGTTCACAGGTCGC
CGGGCGCCGCGACGGCTCATGCGGACCGTAGTCTTGAAGGAATACGAGGG
CGAAGAAGGTCAATACGACGAGCAGGCAATCCAAAGCAGGATTGAGAGTC
TAGATGGACAACCGACCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003855 | 3-dehydroquinate dehydratase activity |
| GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity |
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012119-T1.utr3p1 | KJC3_012119-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.5 |
| Note | antiSMASH:Cluster_8.4 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR041121 |
| DBxref | InterPro:IPR031322 |
| DBxref | InterPro:IPR001381 |
| DBxref | InterPro:IPR013708 |
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR006151 |
| DBxref | PFAM:PF01202 |
| DBxref | PFAM:PF08501 |
| DBxref | PFAM:PF18317 |
| DBxref | PFAM:PF01487 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2617955..2621620 + |
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