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KJC3_012122-T1, KJC3_012122-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012122-T1
Unique NameKJC3_012122-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2627451..2628540+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012122-T1 ID=KJC3_012122-T1|Name=KJC3_012122-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1090bp|location=Sequence derived from alignment at ch8:2627451..2628540+ (Aspergillus niger KJC3)
CGATATTCAGCGCAGAGCCACACCATAAGGATTTCAAGTTCTTTTGGAAG
ACTGTCAGCACCATGTCTAAGATCACAGTCGGTACGTTGCCTCTTTTCCC
CAACAATGGAAACAATAGGTGTATGTGTATGAAAGAGAGATGCTAATTAA
TGAACAGCCGGAGTGCGCCAGAACATCGAGCAGCTGCTCAACTACTCTCA
GAATGAGAAGAAGAGAAACTTCCTCGAGACCGTCGAGCTTCAGATCGGTC
TGAAGAACTACGACCCCCAGCGTGACAAGCGTTTCTCTGGCACCATCAAG
CTGCCTACCGTTCCCCGTCCCAACATGACCATCTGGTATGATACCACCCC
CACCGGAATCCTCCCACGGAATAAAGAGAGACAAGGGAACAGAAGTACTA
ATAAGAGGATAGTGTTCTTGGTGACCAGCACGATCTCGACCGTGCCAAGC
ACCACGGCATTGACGCCATGTCCGCCGATGACCTGAAGAAGCTGAACAAG
AACAAGAAGCTCATCAAGAAGCTTGCTCGCAAGTACGATGCTTTCCTTGC
TTCCGACACCCTCATCAAGCAGATCCCCCGTCTCTTGGGTCCTGGTCTTT
CCAAGGGTAAGCACCACATTCCCCATAATATCCCCCAGTCGTGATGAAAT
ACTAAATACTCGATTAGCCGGTAAATTCCCTACCCCCGTCTCTCACGCTG
AGGACATGGCCAACAAGGTCAACGAGGTCAAGTCCACCATCAAGTTCCAG
CTTAAGAAGGTTCTCTGCCTCGGTGTTGCCGTCGGTAACGTTGGCATGAC
TGAGGACGAGCTCGTCGCCAACACCATGCTGGCCATCAACTACCTTGTCT
CTCTGCTTAAGAAGGGTTGGCAGAACGTTGGTAGCCTTGTCCTCAAGGCT
ACCATGTCTCCCCCTAAGCGTCTGTACTAAGCGGGTCGCTTTCTTTTTTT
AATCCTAAAAAGAAAAAGTTATGTGTCACGCTGGGGGTACGACCTTTTTT
TTTAGGGGCTGGGATTCTGGGGTTGTGTTTCGTATCATAGTTTAGCTACT
TATGGTGTGGATTATAATGTGATCCTGGGTTTTGGTCTCT
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Coding sequence (CDS) from alignment at ch8:2627451..2628540+

>KJC3_012122-T1 ID=KJC3_012122-T1|Name=KJC3_012122-T1|organism=Aspergillus niger KJC3|type=CDS|length=1404bp|location=Sequence derived from alignment at ch8:2627451..2628540+ (Aspergillus niger KJC3)
ATGACCATCTGTGTTCTTGGTGACCAGCACGATCTCGACCGTGCCAAGCA
CCACGGCATTGACGCCATGTCCGCCGATGACCTGAAGAAGCTGAACAAGA
ACAAGAAGCTCATCAAGAAGCTTGCTCGCAAGTACGATGCTTTCCTTGCT
TCCGACACCCTCATCAAGCAGATCCCCCGTCTCTTGGGTCCTGGTCTTTC
CAAGGCCGGTAAATTCCCTACCCCCGTCTCTCACGCTGAGGACATGGCCA
ACAAGGTCAACGAGGTCAAGTCCACCATCAAGTTCCAGCTTAAGAAGGTT
CTCTGCCTCGGTGTTGCCGTCGGTAACGTTGGCATGACTGAGGACGAGCT
CGTCGCCAACACCATGCTGGCCATCAACTACCTTGTCTCTCTGCTTAAGA
AGGGTTGGCAGAACGTTGGTAGCCTTGTCCTCAAGGCTACCATGTCTCCC
CCTAAGCGTCTGTACTAAATGACCATCTGTGTTCTTGGTGACCAGCACGA
TCTCGACCGTGCCAAGCACCACGGCATTGACGCCATGTCCGCCGATGACC
TGAAGAAGCTGAACAAGAACAAGAAGCTCATCAAGAAGCTTGCTCGCAAG
TACGATGCTTTCCTTGCTTCCGACACCCTCATCAAGCAGATCCCCCGTCT
CTTGGGTCCTGGTCTTTCCAAGGCCGGTAAATTCCCTACCCCCGTCTCTC
ACGCTGAGGACATGGCCAACAAGGTCAACGAGGTCAAGTCCACCATCAAG
TTCCAGCTTAAGAAGGTTCTCTGCCTCGGTGTTGCCGTCGGTAACGTTGG
CATGACTGAGGACGAGCTCGTCGCCAACACCATGCTGGCCATCAACTACC
TTGTCTCTCTGCTTAAGAAGGGTTGGCAGAACGTTGGTAGCCTTGTCCTC
AAGGCTACCATGTCTCCCCCTAAGCGTCTGTACTAAATGACCATCTGTGT
TCTTGGTGACCAGCACGATCTCGACCGTGCCAAGCACCACGGCATTGACG
CCATGTCCGCCGATGACCTGAAGAAGCTGAACAAGAACAAGAAGCTCATC
AAGAAGCTTGCTCGCAAGTACGATGCTTTCCTTGCTTCCGACACCCTCAT
CAAGCAGATCCCCCGTCTCTTGGGTCCTGGTCTTTCCAAGGCCGGTAAAT
TCCCTACCCCCGTCTCTCACGCTGAGGACATGGCCAACAAGGTCAACGAG
GTCAAGTCCACCATCAAGTTCCAGCTTAAGAAGGTTCTCTGCCTCGGTGT
TGCCGTCGGTAACGTTGGCATGACTGAGGACGAGCTCGTCGCCAACACCA
TGCTGGCCATCAACTACCTTGTCTCTCTGCTTAAGAAGGGTTGGCAGAAC
GTTGGTAGCCTTGTCCTCAAGGCTACCATGTCTCCCCCTAAGCGTCTGTA
CTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CRP74KJC3_012122Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012122-T1KJC3_012122-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012122-T1.utr5p1KJC3_012122-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012122-T1.exon1KJC3_012122-T1.exon1Aspergillus niger KJC3exon
KJC3_012122-T1.exon2KJC3_012122-T1.exon2Aspergillus niger KJC3exon
KJC3_012122-T1.exon3KJC3_012122-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012122-T1.cdsKJC3_012122-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012122-T1.utr3p1KJC3_012122-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR023674
DBxrefInterPro:IPR023673
DBxrefInterPro:IPR028364
DBxrefInterPro:IPR016095
DBxrefPFAM:PF00687
Product60S ribosomal protein L10a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2627451..2628540 +
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