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KJC3_012140-T1, KJC3_012140-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012140-T1
Unique NameKJC3_012140-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2679897..2681305-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012140-T1 ID=KJC3_012140-T1|Name=KJC3_012140-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1409bp|location=Sequence derived from alignment at ch8:2679897..2681305- (Aspergillus niger KJC3)
AACAGACCCGGCCCAGCCGCGTAAAAAGAGGCCACCCTGTCGCCAAGTCC
GAGTCATCAGTTCGTATGTGTTCGCGAGGCTGAGTCGTGCGGAACGGTCA
CCTGCACCCACCCCCGTCAGCCGCCAGTCACCCACCACCCATTCCTGCAG
CACGCCCCAGCTGATCATCTTCACAGGACAACCATATACTATCCGAATAT
AACAGCCATCCCAACTGCAACCCCATACATGCATCCATCCATACATACAT
ACATACCAACCAATATCCCTCACCACACATTCATTCCCAAACCAGACCAG
CGATAAACTGTCCCATCCATTAAATTCCTCACTTCCAAAATATGTCCGAC
CCCTACCCCCAGCACCAGCAACCATCCTACCTCTCCCCCGGCCCAAATAG
CGAAACTCCGTACTACTCTCCCCCGGACGGCGTCTACCAGCACGCAGGAT
ACGACTACGAACCGCAACAGTTCTACAATCAACATGCGCTGCCGAATCAA
GACCCCGCTTATAGTTCTCAGTACGACGTGAGCCAGATCCCTCGGTCTTA
TCCGACACAATGGAATCCGCAGCCTGCTAGCAGCAGCAGCACCAATATCA
ATAATGTCAACAATGAGTCTAATCCTACATCGCATTATGATCCCGACCGT
CTAGGACCGGGCTATGAACCGCCTGTTCGGAGGGGGAGTAATGCTGAGTA
CTAGTCTGTTTTTCTTTCCCTCAATCTCATATGTAAATTATACAGCATAC
AATTATACTTATACACAAGGGAATAAAACAGTGCCCAGTCCGCCGCAGAC
ATGCAAGCCCTTCCTCCTTCAGCCCTGGAGACCGAACAGCAATCCCGCAC
CAACGGAAATGATCCCACTACCGCTGGTGCTACTGGTGAAGAAGAAGGCG
AGCGCAGTCTAGGTGGAGCTGTTCTCGGTGGTGCGACAGGGTACTATCTG
GGACATAAGAAAGACCATGGACTTTTGGGGGCAGTTGGGGGTGCGATCTT
GGGGAATTTCGTTAGTAATAAGATGAAGAAGGACGATAGTGATGAAGAGG
TGGAGGTGGATGATGATCGCGAGACGGAGTACACTCGGTATCATAGTAGT
CATTATCGACGGTCGTCGAGTCATGGACATGGACACCATCATCATCACCA
CCATCACCATCATCATCATGGTCATGGACATCGGAGTCGGAGTCGAAGTC
GGCATGAGGAGTATGAGGAGTGGTAGGGAAGTATTATGAGTTATGAGTTA
TGGGTTATGATTGATTGTTTCCTTGAGCAGTGAGCCATGTTGGATATGAA
TCATGATGTTGATACCCTCTTTGTCTCTGTTTATGCTTCTACTTACTGTG
AGTTACTGGCTATATAGACTGTTAGTTATTCAATTTATCCACACGGTGGT
CTCTCCAAG
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Coding sequence (CDS) from alignment at ch8:2679897..2681305-

>KJC3_012140-T1 ID=KJC3_012140-T1|Name=KJC3_012140-T1|organism=Aspergillus niger KJC3|type=CDS|length=1614bp|location=Sequence derived from alignment at ch8:2679897..2681305- (Aspergillus niger KJC3)
TGCCCAGTCCGCCGCAGACATGCAAGCCCTTCCTCCTTCAGCCCTGGAGA
CCGAACAGCAATCCCGCACCAACGGAAATGATCCCACTACCGCTGGTGCT
ACTGGTGAAGAAGAAGGCGAGCGCAGTCTAGGTGGAGCTGTTCTCGGTGG
TGCGACAGGGTACTATCTGGGACATAAGAAAGACCATGGACTTTTGGGGG
CAGTTGGGGGTGCGATCTTGGGGAATTTCGTTAGTAATAAGATGAAGAAG
GACGATAGTGATGAAGAGGTGGAGGTGGATGATGATCGCGAGACGGAGTA
CACTCGGTATCATAGTAGTCATTATCGACGGTCGTCGAGTCATGGACATG
GACACCATCATCATCACCACCATCACCATCATCATCATGGTCATGGACAT
CGGAGTCGGAGTCGAAGTCGGCATGAGGAGTATGAGGAGTGGTAGATGTC
CGACCCCTACCCCCAGCACCAGCAACCATCCTACCTCTCCCCCGGCCCAA
ATAGCGAAACTCCGTACTACTCTCCCCCGGACGGCGTCTACCAGCACGCA
GGATACGACTACGAACCGCAACAGTTCTACAATCAACATGCGCTGCCGAA
TCAAGACCCCGCTTATAGTTCTCAGTACGACGTGAGCCAGATCCCTCGGT
CTTATCCGACACAATGGAATCCGCAGCCTGCTAGCAGCAGCAGCACCAAT
ATCAATAATGTCAACAATGAGTCTAATCCTACATCGCATTATGATCCCGA
CCGTCTAGGACCGGGCTATGAACCGCCTGTTCGGAGGGGGAGTAATGCTG
AGTACTATGCCCAGTCCGCCGCAGACATGCAAGCCCTTCCTCCTTCAGCC
CTGGAGACCGAACAGCAATCCCGCACCAACGGAAATGATCCCACTACCGC
TGGTGCTACTGGTGAAGAAGAAGGCGAGCGCAGTCTAGGTGGAGCTGTTC
TCGGTGGTGCGACAGGGTACTATCTGGGACATAAGAAAGACCATGGACTT
TTGGGGGCAGTTGGGGGTGCGATCTTGGGGAATTTCGTTAGTAATAAGAT
GAAGAAGGACGATAGTGATGAAGAGGTGGAGGTGGATGATGATCGCGAGA
CGGAGTACACTCGGTATCATAGTAGTCATTATCGACGGTCGTCGAGTCAT
GGACATGGACACCATCATCATCACCACCATCACCATCATCATCATGGTCA
TGGACATCGGAGTCGGAGTCGAAGTCGGCATGAGGAGTATGAGGAGTGGT
AGATGTCCGACCCCTACCCCCAGCACCAGCAACCATCCTACCTCTCCCCC
GGCCCAAATAGCGAAACTCCGTACTACTCTCCCCCGGACGGCGTCTACCA
GCACGCAGGATACGACTACGAACCGCAACAGTTCTACAATCAACATGCGC
TGCCGAATCAAGACCCCGCTTATAGTTCTCAGTACGACGTGAGCCAGATC
CCTCGGTCTTATCCGACACAATGGAATCCGCAGCCTGCTAGCAGCAGCAG
CACCAATATCAATAATGTCAACAATGAGTCTAATCCTACATCGCATTATG
ATCCCGACCGTCTAGGACCGGGCTATGAACCGCCTGTTCGGAGGGGGAGT
AATGCTGAGTACTA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0019867outer membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012140KJC3_012140Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012140-T1KJC3_012140-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012140-T1.cdsKJC3_012140-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012140-T1.utr3p1KJC3_012140-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012140-T1.exon3KJC3_012140-T1.exon3Aspergillus niger KJC3exon
KJC3_012140-T1.exon2KJC3_012140-T1.exon2Aspergillus niger KJC3exon
KJC3_012140-T1.exon1KJC3_012140-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012140-T1.utr5p2KJC3_012140-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_012140-T1.utr5p1KJC3_012140-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR008816
DBxrefPFAM:PF05433
DBxrefPFAM:PF13488
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2679897..2681305 -
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